Cow genome map


           Conread name:
           rplac_8678.y1
        

               Conread position:
               2-475
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               287
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               25, 8
               

               Conread position:
               81-438
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               53, 84
               

               Conread position:
               83-474
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               84, 73
               

               Conread position:
               83-496
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               260
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               114, 237
               

               Conread position:
               96-493
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               263
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               37, 69
               

               Conread position:
               99-474
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               105-468
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               105-469
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               92, 132
               

               Conread position:
               105-474
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 37
               

               Conread position:
               105-474
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               92, 127
               

               Conread position:
               105-475
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               105-475
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               98, 129
               

               Conread position:
               105-476
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               92, 138
               

               Conread position:
               105-476
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               97, 145
               

               Conread position:
               105-476
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               90, 308
               

               Conread position:
               105-476
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               39, 30
               

               Conread position:
               105-486
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               98, 127
               

               Conread position:
               105-490
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               105-493
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               92, 129
               

               Conread position:
               108-477
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               60, 47
               

               Conread position:
               109-434
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               88, 222
               

               Conread position:
               109-474
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               25, 33
               

               Conread position:
               109-475
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               25, 49
               

               Conread position:
               109-476
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               85, 107
               

               Conread position:
               109-476
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               246
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               25, 33
               

               Conread position:
               109-500
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               259
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               55, 35
               

               Conread position:
               110-446
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               87, 124
               

               Conread position:
               111-495
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               234
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               92, 195
               

               Conread position:
               117-474
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               86, 211
               

               Conread position:
               117-491
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               248
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               38, 21
               

               Conread position:
               123-477
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               75, 109
               

               Conread position:
               154-474
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               13, 86
               

               Conread position:
               156-478
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               41, 78
               

               Conread position:
               164-476
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               183-486
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 48
               

               Conread position:
               193-477
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               44, 35
               

               Conread position:
               199-486
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               44, 30
               

               Conread position:
               200-476
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               41, 29
               

               Conread position:
               200-476
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               31, 55
               

               Conread position:
               200-478
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               43, 29
               

               Conread position:
               200-492
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               43, 32
               

               Conread position:
               201-475
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               12, 88
               

               Conread position:
               205-476
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               44, 24
               

               Conread position:
               206-445
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 23
               

               Conread position:
               206-500
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               210-476
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 19
               

               Conread position:
               214-474
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               24, 17
               

               Conread position:
               214-474
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               24, 17
               

               Conread position:
               215-474
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               107, 96
               

               Conread position:
               231-473
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               20, 25
               

               Conread position:
               231-476
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               86, 11
               

               Conread position:
               246-476
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               36, 26
               

               Conread position:
               247-475
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               76, 70
               

               Conread position:
               247-495
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               247-502
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               244, 0
               

               Conread position:
               248-465
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               248-476
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               253-476
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               165, 159
               

               Conread position:
               253-476
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               254-474
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               58, 48
               

               Conread position:
               254-476
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               254-477
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               68, 59
               

               Conread position:
               255-404
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               62, 66
               

               Conread position:
               261-476
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               263-476
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               13, 69
               

               Conread position:
               263-481
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               265-476
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               268-477
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               59, 49
               

               Conread position:
               268-477
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               11, 50
               

               Conread position:
               269-470
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               123, 132
               

               Conread position:
               270-481
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               68, 33
               

               Conread position:
               270-495
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               48, 55
               

               Conread position:
               272-487
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               272-493
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 53
               

               Conread position:
               292-487
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               25, 41
               
Show alignments to all cow chromosomes.