Cow genome map


           Conread name:
           rplac_8678.y1
        

               Conread position:
               57-493
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               284
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               140, 24
               

               Conread position:
               78-492
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               7, 162
               

               Conread position:
               83-468
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               75, 55
               

               Conread position:
               83-468
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               114, 156
               

               Conread position:
               83-482
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               256
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               85, 69
               

               Conread position:
               83-495
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               69, 82
               

               Conread position:
               85-487
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 57
               

               Conread position:
               96-441
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               90, 57
               

               Conread position:
               96-478
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               233
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               101, 291
               

               Conread position:
               96-492
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               96-493
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               258
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               100, 76
               

               Conread position:
               101-493
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 67
               

               Conread position:
               105-476
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               91, 155
               

               Conread position:
               105-478
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               105-487
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               105-491
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               93, 126
               

               Conread position:
               105-493
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               90, 129
               

               Conread position:
               105-493
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               92, 127
               

               Conread position:
               105-493
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 48
               

               Conread position:
               105-502
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               248
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               58, 42
               

               Conread position:
               105-513
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               258
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               62, 55
               

               Conread position:
               109-493
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               55, 44
               

               Conread position:
               110-476
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               111-500
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               14, 40
               

               Conread position:
               115-439
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               82, 119
               

               Conread position:
               131-493
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               21, 10
               

               Conread position:
               162-493
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               36, 111
               

               Conread position:
               165-474
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               32, 126
               

               Conread position:
               166-474
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               31, 68
               

               Conread position:
               197-474
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               58, 30
               

               Conread position:
               200-475
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               67, 34
               

               Conread position:
               206-468
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               206-495
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               285, 0
               

               Conread position:
               210-474
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               210-487
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               183, 174
               

               Conread position:
               210-492
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               53, 19
               

               Conread position:
               210-493
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               41, 46
               

               Conread position:
               213-465
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               239-441
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               239-488
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               240-478
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               242-487
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               248-475
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 72
               

               Conread position:
               253-493
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               79, 75
               

               Conread position:
               253-497
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 231
               

               Conread position:
               254-448
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               254-477
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               254-482
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               64, 75
               

               Conread position:
               254-492
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               63, 68
               

               Conread position:
               261-479
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               263-475
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               263-487
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               263-496
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               14, 227
               

               Conread position:
               268-480
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               197, 0
               

               Conread position:
               269-479
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               269-493
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               271-495
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               272-476
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               293-475
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 28
               
Show alignments to all cow chromosomes.