Cow genome map
| Conread name: | rplac_8678.y1 |
| Conread position: | 20-469 |
| Cow position: | chr28:7758323-7758776 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 10, 142 |
| Conread position: | 72-475 |
| Cow position: | chr28:7757889-7758294 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 88, 11 |
| Conread position: | 78-448 |
| Cow position: | chr28:7810564-7810938 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 6, 80 |
| Conread position: | 78-492 |
| Cow position: | chr28:9290145-9290557 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 6, 60 |
| Conread position: | 83-429 |
| Cow position: | chr28:7757983-7758332 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 83-475 |
| Cow position: | chr28:7757479-7757874 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 66, 74 |
| Conread position: | 83-476 |
| Cow position: | chr28:7757731-7758127 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 257 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 114, 154 |
| Conread position: | 83-478 |
| Cow position: | chr28:7757563-7757961 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 258 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 69, 85 |
| Conread position: | 83-487 |
| Cow position: | chr28:9253250-9253659 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 75, 70 |
| Conread position: | 83-500 |
| Cow position: | chr28:9253082-9253501 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 86, 77 |
| Conread position: | 105-440 |
| Cow position: | chr28:9299222-9299560 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 105-500 |
| Cow position: | chr28:7810349-7810737 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 93, 188 |
| Conread position: | 105-501 |
| Cow position: | chr28:7757417-7757817 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 254 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 91, 143 |
| Conread position: | 106-474 |
| Cow position: | chr28:7757334-7757705 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 88, 131 |
| Conread position: | 109-475 |
| Cow position: | chr28:9252940-9253309 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 163-475 |
| Cow position: | chr28:9253078-9253393 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 34, 73 |
| Conread position: | 165-474 |
| Cow position: | chr28:9253248-9253560 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 32, 69 |
| Conread position: | 200-476 |
| Cow position: | chr28:9290351-9290625 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 74, 24 |
| Conread position: | 200-479 |
| Cow position: | chr28:9298916-9299193 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 200-486 |
| Cow position: | chr28:33210243-33210529 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 36, 31 |
| Conread position: | 206-448 |
| Cow position: | chr28:7810285-7810527 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 32, 27 |
| Conread position: | 206-474 |
| Cow position: | chr28:7758429-7758697 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 70, 46 |
| Conread position: | 206-476 |
| Cow position: | chr28:7757353-7757623 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 68, 12 |
| Conread position: | 208-476 |
| Cow position: | chr28:9298673-9298940 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 239-469 |
| Cow position: | chr28:7810561-7810791 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 239-475 |
| Cow position: | chr28:9298622-9298855 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 254-474 |
| Cow position: | chr28:9299290-9299510 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 47, 67 |
| Conread position: | 268-475 |
| Cow position: | chr28:9299220-9299427 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-496 |
| Cow position: | chr28:33210395-33210623 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 31, 47 |
| Conread position: | 269-475 |
| Cow position: | chr28:9298567-9298772 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 34, 98 |
| Conread position: | 271-475 |
| Cow position: | chr28:7757334-7757538 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 288-474 |
| Cow position: | chr28:7810283-7810469 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.