Cow genome map
| Conread name: | rplac_8678.y1 |
| Conread position: | 66-493 |
| Cow position: | chr8:45201233-45201662 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 283 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 93, 17 |
| Conread position: | 83-493 |
| Cow position: | chr8:48407567-48407154 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 107, 151 |
| Conread position: | 96-487 |
| Cow position: | chr8:45201430-45201824 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 96-487 |
| Cow position: | chr8:48407638-48407244 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 103, 136 |
| Conread position: | 105-474 |
| Cow position: | chr8:46816214-46816586 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 92, 120 |
| Conread position: | 105-476 |
| Cow position: | chr8:46816550-46816924 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 29, 63 |
| Conread position: | 105-477 |
| Cow position: | chr8:45201019-45201394 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 92, 221 |
| Conread position: | 105-487 |
| Cow position: | chr8:46816718-46817103 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 254 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 105-487 |
| Cow position: | chr8:46816802-46817187 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 73 |
| Conread position: | 105-493 |
| Cow position: | chr8:48407377-48406986 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 30, 37 |
| Conread position: | 105-507 |
| Cow position: | chr8:46816382-46816788 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 29, 52 |
| Conread position: | 106-487 |
| Cow position: | chr8:45200936-45201320 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 41, 31 |
| Conread position: | 107-459 |
| Cow position: | chr8:48407123-48406768 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 93, 125 |
| Conread position: | 107-476 |
| Cow position: | chr8:45201357-45201729 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 90, 129 |
| Conread position: | 107-497 |
| Cow position: | chr8:46816972-46817364 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 27, 61 |
| Conread position: | 109-435 |
| Cow position: | chr8:45201611-45201940 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 48 |
| Conread position: | 109-476 |
| Cow position: | chr8:45201527-45201897 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 109-476 |
| Cow position: | chr8:46815966-46816336 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 85, 115 |
| Conread position: | 109-487 |
| Cow position: | chr8:46816134-46816515 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 94, 128 |
| Conread position: | 109-496 |
| Cow position: | chr8:55581079-55581468 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 257 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 45, 52 |
| Conread position: | 123-453 |
| Cow position: | chr8:48406687-48406354 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 109 |
| Conread position: | 157-492 |
| Cow position: | chr8:55581210-55581549 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 11, 149 |
| Conread position: | 162-493 |
| Cow position: | chr8:48407152-48406818 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 35, 88 |
| Conread position: | 166-474 |
| Cow position: | chr8:45201164-45201475 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 167-493 |
| Cow position: | chr8:55580885-55581214 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 30, 67 |
| Conread position: | 194-476 |
| Cow position: | chr8:55580747-55581029 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 38 |
| Conread position: | 200-480 |
| Cow position: | chr8:55581005-55581286 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 237-493 |
| Cow position: | chr8:55580874-55581130 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 245-510 |
| Cow position: | chr8:46816021-46816288 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 76, 58 |
| Conread position: | 254-482 |
| Cow position: | chr8:48406637-48406409 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-486 |
| Cow position: | chr8:55581479-55581711 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-487 |
| Cow position: | chr8:55581395-55581628 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 71 |
| Conread position: | 254-493 |
| Cow position: | chr8:48407309-48407070 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 64, 71 |
| Conread position: | 256-476 |
| Cow position: | chr8:45200921-45201141 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 268-510 |
| Cow position: | chr8:45201017-45201261 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 42, 54 |
| Conread position: | 293-477 |
| Cow position: | chr8:6958056-6957872 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.