Cow genome map
| Conread name: | rplac_8678.y1 |
| Conread position: | 70-441 |
| Cow position: | chrX:25310192-25310566 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 98, 84 |
| Conread position: | 82-492 |
| Cow position: | chrX:29045198-29044785 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 74 |
| Conread position: | 83-476 |
| Cow position: | chrX:25324768-25324372 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 80, 69 |
| Conread position: | 83-510 |
| Cow position: | chrX:25309953-25310385 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 85, 55 |
| Conread position: | 83-510 |
| Cow position: | chrX:25325524-25325092 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 68, 85 |
| Conread position: | 96-449 |
| Cow position: | chrX:29045016-29044660 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 64, 57 |
| Conread position: | 105-474 |
| Cow position: | chrX:25309807-25310179 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 42, 63 |
| Conread position: | 105-476 |
| Cow position: | chrX:25325334-25324960 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 105-480 |
| Cow position: | chrX:29045826-29045448 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 105-487 |
| Cow position: | chrX:25324830-25324445 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 260 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 44, 63 |
| Conread position: | 105-493 |
| Cow position: | chrX:25310143-25310534 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 42, 53 |
| Conread position: | 109-487 |
| Cow position: | chrX:25325246-25324865 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 94, 127 |
| Conread position: | 111-510 |
| Cow position: | chrX:25325832-25325428 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 38, 54 |
| Conread position: | 140-487 |
| Cow position: | chrX:25309602-25309940 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 95, 20 |
| Conread position: | 146-474 |
| Cow position: | chrX:25309679-25310011 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 17, 79 |
| Conread position: | 156-500 |
| Cow position: | chrX:29045041-29044694 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 7, 341 |
| Conread position: | 172-492 |
| Cow position: | chrX:25325603-25325280 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 29, 73 |
| Conread position: | 190-474 |
| Cow position: | chrX:29045339-29045055 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 67 |
| Conread position: | 200-495 |
| Cow position: | chrX:25324984-25324690 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 118, 133 |
| Conread position: | 212-488 |
| Cow position: | chrX:25324469-25324196 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 34 |
| Conread position: | 213-510 |
| Cow position: | chrX:25324888-25324588 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 64, 30 |
| Conread position: | 254-492 |
| Cow position: | chrX:29045758-29045520 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 63, 75 |
| Conread position: | 269-482 |
| Cow position: | chrX:13826780-13826567 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 54, 30 |
| Conread position: | 269-492 |
| Cow position: | chrX:29045827-29045604 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.