Cow genome map
| Conread name: | rplac_8938.y1 |
| Conread position: | 1-486 |
| Cow position: | chr14:25876935-25877420 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 303 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 5-414 |
| Cow position: | chr14:25794562-25794154 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 194, 178 |
| Conread position: | 5-480 |
| Cow position: | chr14:25836751-25837226 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 292 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-486 |
| Cow position: | chr14:25795150-25794669 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 310 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 23, 47 |
| Conread position: | 16-490 |
| Cow position: | chr14:25859559-25860037 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 302 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 6, 90 |
| Conread position: | 19-490 |
| Cow position: | chr14:25794887-25794413 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 107 |
| Conread position: | 27-490 |
| Cow position: | chr14:25783567-25784029 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 335, 11 |
| Conread position: | 27-490 |
| Cow position: | chr14:25794791-25794328 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 149, 11 |
| Conread position: | 28-490 |
| Cow position: | chr14:25783820-25784281 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 299 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 13, 9 |
| Conread position: | 28-490 |
| Cow position: | chr14:25795462-25795001 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 178, 8 |
| Conread position: | 34-489 |
| Cow position: | chr14:25860253-25860708 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 226, 248 |
| Conread position: | 36-489 |
| Cow position: | chr14:25783491-25783944 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 157 |
| Conread position: | 36-493 |
| Cow position: | chr14:3080111-3079652 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 279 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 148, 159 |
| Conread position: | 37-432 |
| Cow position: | chr14:3101439-3101046 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 147, 115 |
| Conread position: | 37-432 |
| Cow position: | chr14:3127706-3127311 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 250 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 147, 173 |
| Conread position: | 38-436 |
| Cow position: | chr14:25877476-25877874 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 249 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 56, 76 |
| Conread position: | 38-489 |
| Cow position: | chr14:25876720-25877171 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 290 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 67, 82 |
| Conread position: | 38-490 |
| Cow position: | chr14:25795285-25794833 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 287 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 152, 174 |
| Conread position: | 38-492 |
| Cow position: | chr14:25784165-25784619 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 44-434 |
| Cow position: | chr14:25784339-25784729 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 316, 325 |
| Conread position: | 44-488 |
| Cow position: | chr14:25784003-25784447 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 44-493 |
| Cow position: | chr14:25836622-25837071 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 289 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 69, 57 |
| Conread position: | 48-493 |
| Cow position: | chr14:25836374-25836819 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 288 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 136, 149 |
| Conread position: | 49-489 |
| Cow position: | chr14:3127778-3127338 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 270 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 45, 64 |
| Conread position: | 49-489 |
| Cow position: | chr14:25836207-25836647 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 74, 59 |
| Conread position: | 49-489 |
| Cow position: | chr14:25876899-25877339 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 289 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 64, 49 |
| Conread position: | 50-435 |
| Cow position: | chr14:3155975-3156360 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 63, 53 |
| Conread position: | 50-489 |
| Cow position: | chr14:25859513-25859952 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 281 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 163, 133 |
| Conread position: | 50-490 |
| Cow position: | chr14:25859849-25860289 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 284 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 63, 53 |
| Conread position: | 59-490 |
| Cow position: | chr14:25783430-25783861 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 275 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 302, 314 |
| Conread position: | 110-489 |
| Cow position: | chr14:25795465-25795086 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 74, 98 |
| Conread position: | 110-490 |
| Cow position: | chr14:25783313-25783693 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 253 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 73, 89 |
| Conread position: | 112-493 |
| Cow position: | chr14:25835934-25836315 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 33 |
| Conread position: | 113-493 |
| Cow position: | chr14:25860164-25860544 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 5 |
| Conread position: | 114-489 |
| Cow position: | chr14:25836020-25836395 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 70, 85 |
| Conread position: | 117-481 |
| Cow position: | chr14:3155386-3155749 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 67, 7 |
| Conread position: | 121-489 |
| Cow position: | chr14:25876467-25876835 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 182, 177 |
| Conread position: | 146-489 |
| Cow position: | chr14:3155903-3156246 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 135, 102 |
| Conread position: | 218-485 |
| Cow position: | chr14:25910744-25911007 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.