Cow genome map
| Conread name: | rplac_8938.y1 |
| Conread position: | 1-493 |
| Cow position: | chr17:22452522-22452029 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 118, 203 |
| Conread position: | 4-413 |
| Cow position: | chr17:22498860-22498460 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 5-486 |
| Cow position: | chr17:22473450-22473932 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 189 |
| Conread position: | 5-490 |
| Cow position: | chr17:22473366-22473851 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 194 |
| Conread position: | 5-490 |
| Cow position: | chr17:22499279-22498794 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 36, 47 |
| Conread position: | 5-490 |
| Cow position: | chr17:22552400-22551915 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 31 |
| Conread position: | 5-490 |
| Cow position: | chr17:22589902-22589417 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 295 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 178, 204 |
| Conread position: | 6-396 |
| Cow position: | chr17:22589566-22589175 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 19, 93 |
| Conread position: | 19-489 |
| Cow position: | chr17:22499184-22498711 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 308 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 19, 102 |
| Conread position: | 25-474 |
| Cow position: | chr17:22499343-22498894 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 79, 94 |
| Conread position: | 27-486 |
| Cow position: | chr17:22552209-22551751 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 295 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 92, 11 |
| Conread position: | 36-490 |
| Cow position: | chr17:22473313-22473767 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 87 |
| Conread position: | 37-487 |
| Cow position: | chr17:22452233-22451782 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 146, 137 |
| Conread position: | 38-490 |
| Cow position: | chr17:22589953-22589501 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 146, 158 |
| Conread position: | 40-489 |
| Cow position: | chr17:22452397-22451949 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 274 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 144, 11 |
| Conread position: | 49-490 |
| Cow position: | chr17:22552608-22552167 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 284 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 58, 71 |
| Conread position: | 50-486 |
| Cow position: | chr17:22552775-22552339 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 57, 70 |
| Conread position: | 50-490 |
| Cow position: | chr17:22498982-22498542 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 284 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 48, 58 |
| Conread position: | 50-492 |
| Cow position: | chr17:22590193-22589751 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 64, 54 |
| Conread position: | 60-490 |
| Cow position: | chr17:22499392-22498962 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 57 |
| Conread position: | 68-415 |
| Cow position: | chr17:22498880-22498533 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 231 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 293, 305 |
| Conread position: | 122-425 |
| Cow position: | chr17:22452064-22451761 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 62, 72 |
| Conread position: | 122-490 |
| Cow position: | chr17:22590289-22589921 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 81, 56 |
Show alignments to all cow chromosomes.