Cow genome map
| Conread name: | rplac_8938.y1 |
| Conread position: | 1-486 |
| Cow position: | chr19:23597226-23597711 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 110 |
| Conread position: | 1-493 |
| Cow position: | chr19:14940269-14940761 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 115 |
| Conread position: | 5-406 |
| Cow position: | chr19:20635348-20634950 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 180, 192 |
| Conread position: | 5-435 |
| Cow position: | chr19:14960274-14959846 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 5-483 |
| Cow position: | chr19:20678236-20678714 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 34 |
| Conread position: | 5-486 |
| Cow position: | chr19:20678068-20678549 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 179 |
| Conread position: | 5-486 |
| Cow position: | chr19:43570191-43569712 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 202 |
| Conread position: | 5-489 |
| Cow position: | chr19:23597146-23597630 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 45 |
| Conread position: | 5-490 |
| Cow position: | chr19:20635600-20635115 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 180 |
| Conread position: | 5-490 |
| Cow position: | chr19:20677480-20677965 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 110 |
| Conread position: | 5-490 |
| Cow position: | chr19:20677648-20678133 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 116 |
| Conread position: | 5-490 |
| Cow position: | chr19:20677816-20678301 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 185 |
| Conread position: | 5-490 |
| Cow position: | chr19:20677984-20678469 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 12 |
| Conread position: | 5-490 |
| Cow position: | chr19:20678152-20678637 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 184 |
| Conread position: | 5-490 |
| Cow position: | chr19:23613885-23614370 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 121 |
| Conread position: | 5-490 |
| Cow position: | chr19:23614137-23614622 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 5-490 |
| Cow position: | chr19:23649839-23650324 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 101, 94 |
| Conread position: | 5-491 |
| Cow position: | chr19:14940021-14940507 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 33 |
| Conread position: | 19-490 |
| Cow position: | chr19:23613392-23613866 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 168 |
| Conread position: | 20-490 |
| Cow position: | chr19:23649350-23649820 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 285 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 164, 183 |
| Conread position: | 27-350 |
| Cow position: | chr19:23650114-23650436 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 158, 10 |
| Conread position: | 27-489 |
| Cow position: | chr19:23597085-23597546 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 24 |
| Conread position: | 27-490 |
| Cow position: | chr19:14940128-14940590 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 299 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 92, 7 |
| Conread position: | 33-490 |
| Cow position: | chr19:23614499-23614958 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 296 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 17, 241 |
| Conread position: | 35-484 |
| Cow position: | chr19:14960328-14959881 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 78, 63 |
| Conread position: | 35-493 |
| Cow position: | chr19:23649617-23650075 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 296 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 149, 183 |
| Conread position: | 37-429 |
| Cow position: | chr19:23650039-23650432 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 253 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 78, 71 |
| Conread position: | 37-490 |
| Cow position: | chr19:43570243-43569790 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 292 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 66, 78 |
| Conread position: | 37-493 |
| Cow position: | chr19:14940557-14941013 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 83 |
| Conread position: | 38-352 |
| Cow position: | chr19:14940726-14941040 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 136, 156 |
| Conread position: | 38-483 |
| Cow position: | chr19:20635483-20635038 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 146 |
| Conread position: | 38-486 |
| Cow position: | chr19:23613498-23613946 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 292 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 146, 161 |
| Conread position: | 38-487 |
| Cow position: | chr19:14959503-14959069 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 69, 85 |
| Conread position: | 38-490 |
| Cow position: | chr19:20677429-20677881 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 146 |
| Conread position: | 38-493 |
| Cow position: | chr19:20635735-20635280 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 35 |
| Conread position: | 39-485 |
| Cow position: | chr19:14960158-14959714 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 61, 75 |
| Conread position: | 50-484 |
| Cow position: | chr19:23614686-23615118 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 52 |
| Conread position: | 50-490 |
| Cow position: | chr19:20635639-20635199 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 144 |
| Conread position: | 50-490 |
| Cow position: | chr19:23614350-23614790 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 160 |
| Conread position: | 62-489 |
| Cow position: | chr19:23613354-23613781 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 137 |
| Conread position: | 82-485 |
| Cow position: | chr19:14959709-14959308 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 125, 60 |
| Conread position: | 119-490 |
| Cow position: | chr19:14960412-14960043 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 255 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 65, 76 |
| Conread position: | 134-493 |
| Cow position: | chr19:20677441-20677800 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 249 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 8, 16 |
| Conread position: | 137-490 |
| Cow position: | chr19:20677360-20677713 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 232 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 241, 247 |
| Conread position: | 145-485 |
| Cow position: | chr19:14915966-14916304 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 55 |
| Conread position: | 232-492 |
| Cow position: | chr19:23613356-23613616 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 34, 53 |
Show alignments to all cow chromosomes.