Cow genome map

Conread name: rplac_8938.y1

Conread position: 1-392
Cow position:
Alignm length: 394
Alignm identity: 239
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 236, 229

Conread position: 1-489
Cow position:
Alignm length: 491
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 282

Conread position: 1-493
Cow position:
Alignm length: 504
Alignm identity: 314
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 28

Conread position: 5-320
Cow position:
Alignm length: 318
Alignm identity: 198
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 175, 193

Conread position: 5-425
Cow position:
Alignm length: 425
Alignm identity: 259
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 34

Conread position: 5-432
Cow position:
Alignm length: 433
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 108

Conread position: 5-433
Cow position:
Alignm length: 433
Alignm identity: 273
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 109, 94

Conread position: 5-433
Cow position:
Alignm length: 429
Alignm identity: 260
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 418, 0

Conread position: 5-434
Cow position:
Alignm length: 433
Alignm identity: 279
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 112, 98

Conread position: 5-435
Cow position:
Alignm length: 434
Alignm identity: 276
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 179, 191

Conread position: 5-473
Cow position:
Alignm length: 472
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 34

Conread position: 5-483
Cow position:
Alignm length: 486
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 34

Conread position: 5-484
Cow position:
Alignm length: 484
Alignm identity: 299
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 45

Conread position: 5-486
Cow position:
Alignm length: 486
Alignm identity: 307
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 102, 118

Conread position: 5-486
Cow position:
Alignm length: 486
Alignm identity: 298
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 23, 30

Conread position: 5-489
Cow position:
Alignm length: 492
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 111

Conread position: 5-489
Cow position:
Alignm length: 487
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 96

Conread position: 5-489
Cow position:
Alignm length: 488
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 190

Conread position: 5-490
Cow position:
Alignm length: 490
Alignm identity: 307
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 178, 188

Conread position: 5-490
Cow position:
Alignm length: 492
Alignm identity: 304
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 192, 179

Conread position: 5-490
Cow position:
Alignm length: 490
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 34

Conread position: 5-490
Cow position:
Alignm length: 489
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 179

Conread position: 5-493
Cow position:
Alignm length: 491
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 366

Conread position: 5-493
Cow position:
Alignm length: 491
Alignm identity: 303
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 23, 34

Conread position: 5-493
Cow position:
Alignm length: 496
Alignm identity: 310
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 108, 96

Conread position: 6-484
Cow position:
Alignm length: 483
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 34

Conread position: 6-486
Cow position:
Alignm length: 481
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-490
Cow position:
Alignm length: 493
Alignm identity: 318
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 97, 117

Conread position: 6-490
Cow position:
Alignm length: 487
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 109

Conread position: 25-490
Cow position:
Alignm length: 467
Alignm identity: 292
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 325, 12

Conread position: 26-485
Cow position:
Alignm length: 462
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 244

Conread position: 26-490
Cow position:
Alignm length: 472
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 160

Conread position: 30-432
Cow position:
Alignm length: 406
Alignm identity: 261
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 35, 41

Conread position: 33-490
Cow position:
Alignm length: 462
Alignm identity: 277
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 65

Conread position: 37-428
Cow position:
Alignm length: 394
Alignm identity: 241
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 226, 218

Conread position: 37-490
Cow position:
Alignm length: 459
Alignm identity: 291
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 81, 65

Conread position: 37-493
Cow position:
Alignm length: 462
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 74

Conread position: 38-488
Cow position:
Alignm length: 457
Alignm identity: 290
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 81, 62

Conread position: 38-490
Cow position:
Alignm length: 455
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 147

Conread position: 38-493
Cow position:
Alignm length: 457
Alignm identity: 266
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 165, 146

Conread position: 39-483
Cow position:
Alignm length: 451
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 63

Conread position: 40-490
Cow position:
Alignm length: 456
Alignm identity: 285
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 144, 9

Conread position: 44-484
Cow position:
Alignm length: 442
Alignm identity: 272
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 220, 212

Conread position: 44-489
Cow position:
Alignm length: 455
Alignm identity: 296
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 173, 149

Conread position: 44-490
Cow position:
Alignm length: 451
Alignm identity: 288
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 140, 174

Conread position: 44-490
Cow position:
Alignm length: 450
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 79

Conread position: 49-490
Cow position:
Alignm length: 446
Alignm identity: 272
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 144, 138

Conread position: 49-490
Cow position:
Alignm length: 444
Alignm identity: 280
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 141, 152

Conread position: 49-490
Cow position:
Alignm length: 448
Alignm identity: 290
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 154, 144

Conread position: 49-490
Cow position:
Alignm length: 447
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 135

Conread position: 50-350
Cow position:
Alignm length: 304
Alignm identity: 190
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 187, 180

Conread position: 50-399
Cow position:
Alignm length: 353
Alignm identity: 226
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 135, 144

Conread position: 50-400
Cow position:
Alignm length: 353
Alignm identity: 212
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 140, 162

Conread position: 50-483
Cow position:
Alignm length: 438
Alignm identity: 275
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 187, 180

Conread position: 50-485
Cow position:
Alignm length: 440
Alignm identity: 267
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 16, 224

Conread position: 50-490
Cow position:
Alignm length: 442
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 301

Conread position: 50-490
Cow position:
Alignm length: 442
Alignm identity: 280
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 324, 303

Conread position: 50-490
Cow position:
Alignm length: 444
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 250

Conread position: 52-493
Cow position:
Alignm length: 449
Alignm identity: 296
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 83, 48

Conread position: 54-489
Cow position:
Alignm length: 441
Alignm identity: 276
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 65, 48

Conread position: 56-489
Cow position:
Alignm length: 440
Alignm identity: 271
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 67

Conread position: 56-489
Cow position:
Alignm length: 441
Alignm identity: 280
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 51, 65

Conread position: 56-490
Cow position:
Alignm length: 437
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 317

Conread position: 56-493
Cow position:
Alignm length: 441
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 42

Conread position: 71-431
Cow position:
Alignm length: 366
Alignm identity: 229
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 52

Conread position: 102-493
Cow position:
Alignm length: 398
Alignm identity: 260
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 179, 11

Conread position: 110-493
Cow position:
Alignm length: 392
Alignm identity: 253
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 80, 85

Conread position: 113-489
Cow position:
Alignm length: 386
Alignm identity: 250
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 26

Conread position: 122-492
Cow position:
Alignm length: 376
Alignm identity: 237
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 76

Conread position: 128-490
Cow position:
Alignm length: 365
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 172

Conread position: 134-490
Cow position:
Alignm length: 363
Alignm identity: 244
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 54, 60

Conread position: 145-489
Cow position:
Alignm length: 346
Alignm identity: 223
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 212, 79

Show alignments to all cow chromosomes.