Cow genome map
| Conread name: | rplac_8938.y1 |
| Conread position: | 1-492 |
| Cow position: | chr23:24560695-24560204 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 211 |
| Conread position: | 5-350 |
| Cow position: | chr23:24535846-24535501 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 45 |
| Conread position: | 5-352 |
| Cow position: | chr23:24547047-24546700 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 183, 179 |
| Conread position: | 5-401 |
| Cow position: | chr23:25660350-25660746 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 96, 109 |
| Conread position: | 5-403 |
| Cow position: | chr23:24560523-24560125 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 179, 205 |
| Conread position: | 5-490 |
| Cow position: | chr23:25626313-25626795 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 311 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 36, 45 |
| Conread position: | 5-490 |
| Cow position: | chr23:25626481-25626963 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 315 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 36, 45 |
| Conread position: | 22-490 |
| Cow position: | chr23:24522683-24522220 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 162, 15 |
| Conread position: | 27-326 |
| Cow position: | chr23:24654087-24654385 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 75, 11 |
| Conread position: | 30-415 |
| Cow position: | chr23:24626364-24626747 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 257 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 63, 86 |
| Conread position: | 35-432 |
| Cow position: | chr23:24547101-24546704 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 87 |
| Conread position: | 36-487 |
| Cow position: | chr23:24560576-24560125 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 85 |
| Conread position: | 36-489 |
| Cow position: | chr23:24547184-24546731 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 67 |
| Conread position: | 43-410 |
| Cow position: | chr23:24654016-24654385 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 19, 169 |
| Conread position: | 44-489 |
| Cow position: | chr23:24560820-24560375 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 283 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 317, 326 |
| Conread position: | 44-490 |
| Cow position: | chr23:24547260-24546814 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 246 |
| Conread position: | 48-441 |
| Cow position: | chr23:25660309-25660702 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 267 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 68, 75 |
| Conread position: | 50-493 |
| Cow position: | chr23:24535969-24535526 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 134, 145 |
| Conread position: | 58-432 |
| Cow position: | chr23:24535878-24535503 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 150 |
| Conread position: | 106-493 |
| Cow position: | chr23:25660201-25660586 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 78, 15 |
| Conread position: | 112-435 |
| Cow position: | chr23:25698686-25698363 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 68, 97 |
| Conread position: | 122-492 |
| Cow position: | chr23:24626372-24626741 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 88 |
| Conread position: | 122-493 |
| Cow position: | chr23:24547266-24546895 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 62 |
| Conread position: | 128-488 |
| Cow position: | chr23:25724057-25723698 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 74, 56 |
| Conread position: | 130-486 |
| Cow position: | chr23:24536056-24535701 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 52, 6 |
| Conread position: | 142-493 |
| Cow position: | chr23:24547330-24546979 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 32, 72 |
| Conread position: | 151-485 |
| Cow position: | chr23:24654042-24654376 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 33, 46 |
| Conread position: | 201-490 |
| Cow position: | chr23:25660126-25660415 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 236-489 |
| Cow position: | chr23:24654043-24654296 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 125, 134 |
Show alignments to all cow chromosomes.