Cow genome map
Conread name: | rplac_8938.y1 |
Conread position: | 1-316 |
Cow position: | chr7:3180563-3180877 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 206 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 117, 122 |
Conread position: | 1-390 |
Cow position: | chr7:11434622-11434240 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 1-394 |
Cow position: | chr7:8243748-8244138 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 353, 248 |
Conread position: | 1-473 |
Cow position: | chr7:8325851-8326320 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 305 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 285, 280 |
Conread position: | 1-486 |
Cow position: | chr7:8243161-8243645 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 122 |
Conread position: | 1-486 |
Cow position: | chr7:8277706-8278191 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 110 |
Conread position: | 1-488 |
Cow position: | chr7:1014299-1014780 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 305 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 29, 49 |
Conread position: | 1-488 |
Cow position: | chr7:8278126-8278611 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 112 |
Conread position: | 1-490 |
Cow position: | chr7:8243412-8243901 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 433, 444 |
Conread position: | 1-490 |
Cow position: | chr7:8277874-8278363 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 51 |
Conread position: | 1-490 |
Cow position: | chr7:8325011-8325500 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-490 |
Cow position: | chr7:8325347-8325836 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 379 |
Conread position: | 1-490 |
Cow position: | chr7:8325515-8326004 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-493 |
Cow position: | chr7:8277624-8278114 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 3-478 |
Cow position: | chr7:8243666-8244138 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 434, 329 |
Conread position: | 4-490 |
Cow position: | chr7:8242996-8243481 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 384, 0 |
Conread position: | 4-490 |
Cow position: | chr7:8325098-8325584 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-493 |
Cow position: | chr7:8243332-8243820 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 358, 48 |
Conread position: | 5-394 |
Cow position: | chr7:8325771-8326163 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 374, 0 |
Conread position: | 5-432 |
Cow position: | chr7:8325687-8326114 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 47 |
Conread position: | 5-439 |
Cow position: | chr7:8278298-8278723 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 285 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 142, 137 |
Conread position: | 5-470 |
Cow position: | chr7:8244002-8244451 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 299 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 108, 79 |
Conread position: | 5-485 |
Cow position: | chr7:3180315-3180795 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 94 |
Conread position: | 5-486 |
Cow position: | chr7:8242829-8243310 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 23 |
Conread position: | 5-489 |
Cow position: | chr7:3179895-3180379 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 14 |
Conread position: | 5-489 |
Cow position: | chr7:11434786-11434309 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 104 |
Conread position: | 5-490 |
Cow position: | chr7:8243500-8243985 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 47 |
Conread position: | 5-490 |
Cow position: | chr7:8243584-8244067 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 197 |
Conread position: | 5-490 |
Cow position: | chr7:8277542-8278027 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 357, 347 |
Conread position: | 5-490 |
Cow position: | chr7:8324763-8325248 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 189 |
Conread position: | 5-490 |
Cow position: | chr7:8324847-8325332 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 110 |
Conread position: | 5-490 |
Cow position: | chr7:8325267-8325752 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 352, 358 |
Conread position: | 5-490 |
Cow position: | chr7:8325435-8325920 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 357, 350 |
Conread position: | 5-490 |
Cow position: | chr7:11434940-11434476 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 232, 95 |
Conread position: | 5-490 |
Cow position: | chr7:11600989-11600504 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 105 |
Conread position: | 5-490 |
Cow position: | chr7:42879162-42878677 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 186 |
Conread position: | 5-492 |
Cow position: | chr7:8324931-8325418 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 366, 350 |
Conread position: | 5-493 |
Cow position: | chr7:18390108-18390596 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 190 |
Conread position: | 9-490 |
Cow position: | chr7:3180067-3180548 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 29 |
Conread position: | 21-488 |
Cow position: | chr7:3179740-3180210 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 166 |
Conread position: | 24-350 |
Cow position: | chr7:11600801-11600476 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 211 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 26-490 |
Cow position: | chr7:8277395-8277859 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 99 |
Conread position: | 27-493 |
Cow position: | chr7:8278068-8278532 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 247, 256 |
Conread position: | 27-493 |
Cow position: | chr7:11601134-11600669 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 10 |
Conread position: | 29-485 |
Cow position: | chr7:8325627-8326083 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 426, 413 |
Conread position: | 29-490 |
Cow position: | chr7:8242937-8243397 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 334, 326 |
Conread position: | 29-490 |
Cow position: | chr7:8325207-8325668 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 36-349 |
Cow position: | chr7:18390475-18390788 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 197 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 148, 160 |
Conread position: | 37-489 |
Cow position: | chr7:8277824-8278278 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 149 |
Conread position: | 37-491 |
Cow position: | chr7:18390224-18390678 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 291 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 337, 319 |
Conread position: | 42-486 |
Cow position: | chr7:1014838-1015282 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 282 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 62, 74 |
Conread position: | 42-493 |
Cow position: | chr7:42879291-42878842 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 31 |
Conread position: | 50-490 |
Cow position: | chr7:8277335-8277775 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 50-490 |
Cow position: | chr7:8277503-8277943 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 145 |
Conread position: | 53-348 |
Cow position: | chr7:1014267-1014562 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 198 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 58, 47 |
Conread position: | 55-490 |
Cow position: | chr7:8277256-8277691 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 58 |
Conread position: | 55-490 |
Cow position: | chr7:8324729-8325164 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 57 |
Conread position: | 55-490 |
Cow position: | chr7:11434974-11434553 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 68 |
Conread position: | 56-490 |
Cow position: | chr7:11601190-11600756 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 138 |
Conread position: | 57-490 |
Cow position: | chr7:1014685-1015118 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 280 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 127, 147 |
Conread position: | 68-490 |
Cow position: | chr7:8242808-8243230 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 302 |
Conread position: | 142-433 |
Cow position: | chr7:1014272-1014563 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 199 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 42, 54 |
Conread position: | 145-490 |
Cow position: | chr7:1439638-1439985 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 228 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 52, 135 |
Conread position: | 146-493 |
Cow position: | chr7:8277263-8277610 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 232 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 73, 46 |
Conread position: | 202-478 |
Cow position: | chr7:8277233-8277511 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 190 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 12, 81 |
Conread position: | 202-483 |
Cow position: | chr7:11434997-11434728 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 197 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 12, 152 |
Conread position: | 203-493 |
Cow position: | chr7:3179757-3180047 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 195 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 168, 152 |
Conread position: | 211-489 |
Cow position: | chr7:1014257-1014535 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 182 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 163, 145 |
Show alignments to all cow chromosomes.