Cow genome map
| Conread name: | rplac_8938.y1 |
| Conread position: | 5-442 |
| Cow position: | chr8:55581272-55581709 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 23, 47 |
| Conread position: | 5-478 |
| Cow position: | chr8:55581188-55581661 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 302 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 25, 34 |
| Conread position: | 5-489 |
| Cow position: | chr8:48407096-48406612 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 289 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 5-490 |
| Cow position: | chr8:46816159-46816644 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 308 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 5-490 |
| Cow position: | chr8:55580852-55581337 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 308 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 33 |
| Conread position: | 5-493 |
| Cow position: | chr8:48407432-48406944 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 306 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 87, 91 |
| Conread position: | 23-490 |
| Cow position: | chr8:45200979-45201449 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 35 |
| Conread position: | 27-486 |
| Cow position: | chr8:48406905-48406447 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 150, 11 |
| Conread position: | 30-489 |
| Cow position: | chr8:46816352-46816811 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 92 |
| Conread position: | 30-490 |
| Cow position: | chr8:45201241-45201701 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 82 |
| Conread position: | 34-490 |
| Cow position: | chr8:45201161-45201617 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 85 |
| Conread position: | 35-490 |
| Cow position: | chr8:46816021-46816476 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 168, 149 |
| Conread position: | 35-493 |
| Cow position: | chr8:46816525-46816983 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 297 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 86, 65 |
| Conread position: | 40-490 |
| Cow position: | chr8:46816447-46816896 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 285 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 72, 11 |
| Conread position: | 42-486 |
| Cow position: | chr8:48407563-48407119 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 60 |
| Conread position: | 42-490 |
| Cow position: | chr8:55581057-55581505 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 290 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 142, 154 |
| Conread position: | 50-459 |
| Cow position: | chr8:45201597-45202006 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 311, 320 |
| Conread position: | 50-484 |
| Cow position: | chr8:45201513-45201948 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 145 |
| Conread position: | 50-489 |
| Cow position: | chr8:45201429-45201868 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 52 |
| Conread position: | 50-490 |
| Cow position: | chr8:45201093-45201533 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 286 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 153, 134 |
| Conread position: | 50-490 |
| Cow position: | chr8:46816708-46817148 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 156, 136 |
| Conread position: | 50-490 |
| Cow position: | chr8:46816876-46817316 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 64, 52 |
| Conread position: | 50-490 |
| Cow position: | chr8:48407219-48406779 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 284 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 220, 229 |
| Conread position: | 56-484 |
| Cow position: | chr8:48406707-48406281 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 57, 6 |
| Conread position: | 122-489 |
| Cow position: | chr8:55581053-55581420 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 249 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 77, 62 |
| Conread position: | 164-432 |
| Cow position: | chr8:6958059-6957791 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 35 |
Show alignments to all cow chromosomes.