Cow genome map
| Conread name: | rplac_8938.y1 |
| Conread position: | 1-348 |
| Cow position: | chrX:12627715-12628062 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 110 |
| Conread position: | 5-413 |
| Cow position: | chrX:29045062-29044654 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 198, 179 |
| Conread position: | 5-489 |
| Cow position: | chrX:25325222-25324737 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 313 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 38, 29 |
| Conread position: | 5-490 |
| Cow position: | chrX:25310004-25310489 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 177 |
| Conread position: | 5-490 |
| Cow position: | chrX:25325473-25324988 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 314 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 109, 93 |
| Conread position: | 5-493 |
| Cow position: | chrX:12627385-12627871 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 303 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 46, 41 |
| Conread position: | 11-490 |
| Cow position: | chrX:25325383-25324904 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 310 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 112, 108 |
| Conread position: | 18-473 |
| Cow position: | chrX:29045867-29045413 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 343, 28 |
| Conread position: | 18-493 |
| Cow position: | chrX:25309853-25310324 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 303 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 94, 20 |
| Conread position: | 30-401 |
| Cow position: | chrX:25324608-25324237 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 11, 22 |
| Conread position: | 34-485 |
| Cow position: | chrX:25324856-25324405 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 78, 66 |
| Conread position: | 38-486 |
| Cow position: | chrX:12627334-12627780 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 80 |
| Conread position: | 50-453 |
| Cow position: | chrX:12627680-12628082 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 86, 63 |
| Conread position: | 50-486 |
| Cow position: | chrX:25325008-25324572 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 57, 72 |
| Conread position: | 50-488 |
| Cow position: | chrX:25310133-25310571 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 320 |
| Conread position: | 50-490 |
| Cow position: | chrX:29045101-29044661 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 134 |
| Conread position: | 113-485 |
| Cow position: | chrX:25324609-25324237 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 93, 72 |
| Conread position: | 126-490 |
| Cow position: | chrX:25309705-25310069 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 144, 153 |
| Conread position: | 165-490 |
| Cow position: | chrX:25309660-25309985 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 18, 27 |
Show alignments to all cow chromosomes.