Cow genome map

Conread name: rpldo0106_i5.y1

Conread position: 1-326
Cow position: chr14:25795393-25795068 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 214
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 14, 9

Conread position: 1-330
Cow position: chr14:3080721-3080392 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 208
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 169, 175

Conread position: 4-253
Cow position: chr14:681024-681272 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 12

Conread position: 8-253
Cow position: chr14:3156197-3156443 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 177

Conread position: 8-329
Cow position: chr14:3080043-3079721 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 205
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 9, 169

Conread position: 8-330
Cow position: chr14:3156029-3156352 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 217
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 9, 86

Conread position: 8-330
Cow position: chr14:25859903-25860226 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 200
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 103

Conread position: 8-330
Cow position: chr14:25876954-25877277 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 205
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 99

Conread position: 9-329
Cow position: chr14:680860-681180 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 156, 167

Conread position: 9-330
Cow position: chr14:25784148-25784470 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 206
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 9, 259

Conread position: 10-326
Cow position: chr14:447723-448039 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 90, 94

Conread position: 11-314
Cow position: chr14:25783562-25783866 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 194
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 7, 259

Conread position: 11-326
Cow position: chr14:3100870-3100555 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 204
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 11-329
Cow position: chr14:25794796-25794477 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 207
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 14, 0

Conread position: 11-330
Cow position: chr14:25783480-25783798 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 154, 5

Conread position: 11-330
Cow position: chr14:25784318-25784638 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 209
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 6, 259

Conread position: 12-308
Cow position: chr14:3127634-3127338 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 191
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 173, 162

Conread position: 12-323
Cow position: chr14:3127718-3127407 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 74, 87

Conread position: 13-329
Cow position: chr14:680780-681096 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 195
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 16-329
Cow position: chr14:3127882-3127569 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 207
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 150, 160

Conread position: 16-329
Cow position: chr14:25794874-25794561 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 201
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 16-330
Cow position: chr14:3156122-3156436 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 209
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 86, 81

Conread position: 16-330
Cow position: chr14:25783316-25783630 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 72, 77

Conread position: 16-330
Cow position: chr14:25783652-25783966 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 202
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 234, 253

Conread position: 21-329
Cow position: chr14:447565-447874 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 201
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 5, 163

Conread position: 22-329
Cow position: chr14:680705-681012 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 190
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 148, 154

Conread position: 22-329
Cow position: chr14:25876633-25876940 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 195
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 81, 88

Conread position: 22-330
Cow position: chr14:25836445-25836753 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 148, 154

Conread position: 22-330
Cow position: chr14:25859582-25859890 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 198
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 245, 237

Conread position: 23-310
Cow position: chr14:3101356-3101070 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 63, 24

Conread position: 23-330
Cow position: chr14:25783995-25784302 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 204
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 221, 246

Conread position: 25-326
Cow position: chr14:447822-448123 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 190
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 145, 151

Conread position: 25-326
Cow position: chr14:3080865-3080564 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 187
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 106, 92

Conread position: 25-329
Cow position: chr14:447654-447958 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 192
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 145, 151

Conread position: 25-329
Cow position: chr14:25877392-25877696 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 187
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 141, 158

Conread position: 25-329
Cow position: chr14:25910896-25911200 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 188
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 242, 230

Conread position: 25-330
Cow position: chr14:3080109-3079804 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 200
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 25-330
Cow position: chr14:3080529-3080224 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 197
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 145, 151

Conread position: 25-330
Cow position: chr14:3080613-3080308 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 193
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 25-330
Cow position: chr14:3127789-3127484 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 206
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 145, 158

Conread position: 25-330
Cow position: chr14:25836196-25836501 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 195
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 25-330
Cow position: chr14:25836784-25837089 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 189
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 242, 235

Conread position: 25-330
Cow position: chr14:25859333-25859638 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 194
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 25-330
Cow position: chr14:25876720-25877025 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 191
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 25-330
Cow position: chr14:25876804-25877109 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 187
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 31-329
Cow position: chr14:25836286-25836584 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 186
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 236, 227

Conread position: 31-330
Cow position: chr14:25877314-25877613 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 187
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 65

Conread position: 32-329
Cow position: chr14:25836707-25837004 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 185
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 56, 76

Conread position: 33-308
Cow position: chr14:25859257-25859532 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 180
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 137, 143

Conread position: 33-329
Cow position: chr14:25794521-25794224 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 192
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 70, 77

Conread position: 34-329
Cow position: chr14:3155972-3156267 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 191
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 132, 142

Conread position: 41-329
Cow position: chr14:25877072-25877360 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 187
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 129, 135

Conread position: 45-329
Cow position: chr14:25836048-25836332 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 181
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 142, 149

Conread position: 53-330
Cow position: chr14:25795257-25794980 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 174
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 121, 105

Show alignments to all cow chromosomes.