Cow genome map
Conread name: | rpldo0106_i5.y1 |
Conread position: | 1-325 |
Cow position: | chr17:22589809-22589485 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 266, 254 |
Conread position: | 1-330 |
Cow position: | chr17:22552643-22552314 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 226 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 175, 169 |
Conread position: | 2-329 |
Cow position: | chr17:22552055-22551727 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 259 |
Conread position: | 3-329 |
Cow position: | chr17:22552474-22552147 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 102 |
Conread position: | 3-329 |
Cow position: | chr17:22552556-22552231 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 7 |
Conread position: | 5-324 |
Cow position: | chr17:22551800-22551480 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 172 |
Conread position: | 5-329 |
Cow position: | chr17:22551884-22551559 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 5-329 |
Cow position: | chr17:22589972-22589649 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 6-316 |
Cow position: | chr17:22552218-22551908 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 163 |
Conread position: | 6-329 |
Cow position: | chr17:22552722-22552399 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-329 |
Cow position: | chr17:22552890-22552567 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 155 |
Conread position: | 7-299 |
Cow position: | chr17:22589467-22589175 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 193 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 7-329 |
Cow position: | chr17:22473548-22473871 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 205 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 7-329 |
Cow position: | chr17:22552973-22552651 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 7-329 |
Cow position: | chr17:22590139-22589817 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 219 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 256, 263 |
Conread position: | 7-330 |
Cow position: | chr17:22551965-22551642 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 221 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 260, 247 |
Conread position: | 11-326 |
Cow position: | chr17:22553054-22552738 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 13-329 |
Cow position: | chr17:22499090-22498774 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 198 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 159, 145 |
Conread position: | 14-329 |
Cow position: | chr17:22590216-22589901 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 16-326 |
Cow position: | chr17:22451905-22451595 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 194 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 146, 160 |
Conread position: | 16-329 |
Cow position: | chr17:22499171-22498858 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 211 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 251, 228 |
Conread position: | 23-313 |
Cow position: | chr17:22498828-22498538 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 187 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 243, 232 |
Conread position: | 23-329 |
Cow position: | chr17:22473232-22473535 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 196 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 24-326 |
Cow position: | chr17:22451981-22451679 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 193 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 24-329 |
Cow position: | chr17:22552116-22551811 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 24-329 |
Cow position: | chr17:22552368-22552063 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 24-329 |
Cow position: | chr17:22589534-22589229 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 212 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 158, 166 |
Conread position: | 24-330 |
Cow position: | chr17:22452401-22452095 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 210 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 139, 151 |
Conread position: | 24-330 |
Cow position: | chr17:22499331-22499025 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 199 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 25-325 |
Cow position: | chr17:22552283-22551983 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 151 |
Conread position: | 25-325 |
Cow position: | chr17:22589701-22589401 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 25-329 |
Cow position: | chr17:22452148-22451844 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 202 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 62, 51 |
Conread position: | 25-329 |
Cow position: | chr17:22452232-22451928 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 151 |
Conread position: | 25-329 |
Cow position: | chr17:22452316-22452012 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 203 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 76, 51 |
Conread position: | 25-329 |
Cow position: | chr17:22473315-22473619 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 196 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 241, 228 |
Conread position: | 25-329 |
Cow position: | chr17:22590289-22589985 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 204 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 242, 229 |
Conread position: | 25-330 |
Cow position: | chr17:22589869-22589564 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 28-329 |
Cow position: | chr17:22553120-22552819 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 207 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 30-219 |
Cow position: | chr17:22473740-22473930 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 131 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 140, 146 |
Conread position: | 30-329 |
Cow position: | chr17:22473488-22473787 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 202 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 237, 214 |
Conread position: | 30-329 |
Cow position: | chr17:22552782-22552483 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 31-330 |
Cow position: | chr17:22473405-22473704 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 196 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 235, 224 |
Conread position: | 45-330 |
Cow position: | chr17:22499394-22499109 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 185 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 116, 131 |
Conread position: | 66-329 |
Cow position: | chr17:22553166-22552903 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 176 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 54, 62 |
Conread position: | 103-329 |
Cow position: | chr17:22590295-22590069 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 148 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.