Cow genome map
| Conread name: | rpldo0106_i5.y1 |
| Conread position: | 1-329 |
| Cow position: | chr2:78754468-78754792 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 266, 220 |
| Conread position: | 2-322 |
| Cow position: | chr2:82800238-82800553 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 13, 211 |
| Conread position: | 2-330 |
| Cow position: | chr2:82799650-82799979 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 4-240 |
| Cow position: | chr2:78756131-78756365 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 29, 172 |
| Conread position: | 4-329 |
| Cow position: | chr2:78754140-78754460 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 5-329 |
| Cow position: | chr2:78754557-78754864 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 6-329 |
| Cow position: | chr2:78755129-78755451 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 117 |
| Conread position: | 7-325 |
| Cow position: | chr2:78755799-78756116 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 236, 8 |
| Conread position: | 7-326 |
| Cow position: | chr2:82799571-82799891 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 8, 74 |
| Conread position: | 7-329 |
| Cow position: | chr2:78754878-78755200 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 253 |
| Conread position: | 7-329 |
| Cow position: | chr2:78755882-78756205 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 223 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 152, 232 |
| Conread position: | 7-330 |
| Cow position: | chr2:78755214-78755535 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 92 |
| Conread position: | 7-330 |
| Cow position: | chr2:78755465-78755785 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 10-330 |
| Cow position: | chr2:78754964-78755285 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 16-329 |
| Cow position: | chr2:82799833-82800146 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 154, 160 |
| Conread position: | 21-304 |
| Cow position: | chr2:78756065-78756346 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 94, 49 |
| Conread position: | 23-326 |
| Cow position: | chr2:5874784-5874481 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 138, 161 |
| Conread position: | 24-327 |
| Cow position: | chr2:5874447-5874144 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 135, 158 |
| Conread position: | 24-329 |
| Cow position: | chr2:78754409-78754711 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 218, 33 |
| Conread position: | 24-329 |
| Cow position: | chr2:78754811-78755116 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 233 |
| Conread position: | 25-326 |
| Cow position: | chr2:5874698-5874397 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 51, 76 |
| Conread position: | 25-329 |
| Cow position: | chr2:82799506-82799810 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-330 |
| Cow position: | chr2:82800094-82800399 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 132, 150 |
| Conread position: | 27-326 |
| Cow position: | chr2:48689392-48689093 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 216, 237 |
| Conread position: | 28-329 |
| Cow position: | chr2:78755067-78755367 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 0 |
| Conread position: | 31-329 |
| Cow position: | chr2:82800016-82800314 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 210, 226 |
| Conread position: | 43-324 |
| Cow position: | chr2:82799944-82800225 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.