Cow genome map


           Conread name:
           rpldo0106_i5.y1
        

               Conread position:
               5-325
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               9, 88
               

               Conread position:
               6-305
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               5, 179
               

               Conread position:
               6-307
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               9, 164
               

               Conread position:
               6-329
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               7-329
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               235, 252
               

               Conread position:
               8-326
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 168
               

               Conread position:
               8-326
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 168
               

               Conread position:
               8-329
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               9, 177
               

               Conread position:
               8-329
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 251
               

               Conread position:
               10-330
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               13, 171
               

               Conread position:
               11-325
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               11-329
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               223
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               6, 175
               

               Conread position:
               12-330
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-329
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               152, 163
               

               Conread position:
               13-329
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               69, 84
               

               Conread position:
               13-329
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               13-329
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               157, 163
               

               Conread position:
               13-329
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               157, 163
               

               Conread position:
               13-330
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               89, 83
               

               Conread position:
               16-295
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               76, 69
               

               Conread position:
               16-302
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               10, 172
               

               Conread position:
               16-303
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               154, 160
               

               Conread position:
               16-325
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               149, 160
               

               Conread position:
               16-325
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               70, 75
               

               Conread position:
               16-329
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               16-329
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               98, 107
               

               Conread position:
               16-329
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 69
               

               Conread position:
               16-329
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               251, 244
               

               Conread position:
               16-329
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               164, 153
               

               Conread position:
               16-330
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               154, 164
               

               Conread position:
               16-330
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               154, 164
               

               Conread position:
               21-330
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               65, 79
               

               Conread position:
               22-325
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               23-329
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               25, 16
               

               Conread position:
               24-326
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               24-329
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               24-329
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               148, 152
               

               Conread position:
               24-329
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               146, 159
               

               Conread position:
               24-330
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               163, 157
               

               Conread position:
               25-306
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               140, 159
               

               Conread position:
               25-307
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               151, 144
               

               Conread position:
               25-314
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-327
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-329
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-329
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               253, 229
               

               Conread position:
               25-329
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-329
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               28, 158
               

               Conread position:
               25-329
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               140, 155
               

               Conread position:
               25-329
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               14, 8
               

               Conread position:
               25-329
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-329
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               147, 151
               

               Conread position:
               25-329
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               61, 80
               

               Conread position:
               25-330
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-330
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               25-330
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-314
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               54, 62
               

               Conread position:
               30-316
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               237, 229
               

               Conread position:
               32-314
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               54-330
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               116, 129
               

               Conread position:
               104-329
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               62, 72
               

               Conread position:
               140-329
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               25, 35
               
Show alignments to all cow chromosomes.