Cow genome map


           Conread name:
           rpldo0106_i5.y1
        

               Conread position:
               1-303
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               14, 8
               

               Conread position:
               3-326
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 258
               

               Conread position:
               6-250
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               6-302
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               9, 165
               

               Conread position:
               6-327
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               11, 81
               

               Conread position:
               6-329
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               12, 6
               

               Conread position:
               7-329
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               260, 253
               

               Conread position:
               8-308
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 84
               

               Conread position:
               8-321
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 253
               

               Conread position:
               8-329
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               8-329
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               7, 162
               

               Conread position:
               8-329
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               9, 171
               

               Conread position:
               8-329
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               10, 82
               

               Conread position:
               8-329
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               9, 169
               

               Conread position:
               8-329
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               10, 79
               

               Conread position:
               9-327
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               12-314
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               5, 75
               

               Conread position:
               15-329
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               150, 161
               

               Conread position:
               16-329
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               70, 76
               

               Conread position:
               16-330
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               251, 244
               

               Conread position:
               16-330
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               266, 274
               

               Conread position:
               21-218
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               148, 155
               

               Conread position:
               22-329
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               143, 154
               

               Conread position:
               23-253
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               152, 146
               

               Conread position:
               23-303
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               277, 0
               

               Conread position:
               23-325
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               142, 152
               

               Conread position:
               23-329
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               245, 236
               

               Conread position:
               23-329
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               170, 136
               

               Conread position:
               24-323
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               24-329
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               146, 152
               

               Conread position:
               24-329
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               146, 152
               

               Conread position:
               24-330
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               71, 64
               

               Conread position:
               24-330
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               254, 236
               

               Conread position:
               25-304
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-307
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               242, 235
               

               Conread position:
               25-326
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 230
               

               Conread position:
               25-329
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-329
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               242, 235
               

               Conread position:
               25-329
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               151, 144
               

               Conread position:
               28-329
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               142, 148
               

               Conread position:
               29-329
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               60, 47
               

               Conread position:
               40-329
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               65, 70
               

               Conread position:
               41-329
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               48, 35
               

               Conread position:
               41-329
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               124, 134
               

               Conread position:
               43-329
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               8, 14
               

               Conread position:
               46-329
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               126, 130
               

               Conread position:
               49-326
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               121, 126
               

               Conread position:
               54-329
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               110, 121
               

               Conread position:
               61-329
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               87-326
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               180, 166
               

               Conread position:
               108-330
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               14, 33
               

               Conread position:
               145-329
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 31
               
Show alignments to all cow chromosomes.