Cow genome map

Conread name: rpldo0106_i5.y1

Conread position: 1-319
Cow position:
Alignm length: 322
Alignm identity: 212
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 159, 169

Conread position: 3-290
Cow position:
Alignm length: 289
Alignm identity: 185
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 5-325
Cow position:
Alignm length: 323
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 256

Conread position: 6-327
Cow position:
Alignm length: 327
Alignm identity: 204
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 11, 174

Conread position: 6-329
Cow position:
Alignm length: 325
Alignm identity: 217
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 165, 178

Conread position: 6-329
Cow position:
Alignm length: 326
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 171

Conread position: 6-330
Cow position:
Alignm length: 328
Alignm identity: 210
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 110, 34

Conread position: 6-330
Cow position:
Alignm length: 325
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-329
Cow position:
Alignm length: 324
Alignm identity: 211
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 8, 0

Conread position: 7-330
Cow position:
Alignm length: 325
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 173

Conread position: 7-330
Cow position:
Alignm length: 324
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 7-330
Cow position:
Alignm length: 324
Alignm identity: 217
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 7-330
Cow position:
Alignm length: 325
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 87

Conread position: 7-330
Cow position:
Alignm length: 326
Alignm identity: 215
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 165, 169

Conread position: 8-307
Cow position:
Alignm length: 302
Alignm identity: 209
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 9, 248

Conread position: 8-329
Cow position:
Alignm length: 324
Alignm identity: 220
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 10, 253

Conread position: 8-329
Cow position:
Alignm length: 324
Alignm identity: 213
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 9, 253

Conread position: 8-329
Cow position:
Alignm length: 323
Alignm identity: 212
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 7, 0

Conread position: 9-330
Cow position:
Alignm length: 324
Alignm identity: 215
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 7, 251

Conread position: 10-330
Cow position:
Alignm length: 326
Alignm identity: 208
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 6, 132

Conread position: 12-329
Cow position:
Alignm length: 321
Alignm identity: 220
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 67, 78

Conread position: 12-330
Cow position:
Alignm length: 320
Alignm identity: 203
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 158, 132

Conread position: 16-220
Cow position:
Alignm length: 206
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 154, 160

Conread position: 16-287
Cow position:
Alignm length: 273
Alignm identity: 187
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 261, 194

Conread position: 16-290
Cow position:
Alignm length: 276
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 251, 238

Conread position: 16-308
Cow position:
Alignm length: 293
Alignm identity: 187
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 16-325
Cow position:
Alignm length: 312
Alignm identity: 213
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 149, 164

Conread position: 16-329
Cow position:
Alignm length: 314
Alignm identity: 203
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 16-329
Cow position:
Alignm length: 317
Alignm identity: 216
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 154, 160

Conread position: 16-329
Cow position:
Alignm length: 314
Alignm identity: 207
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 16-329
Cow position:
Alignm length: 315
Alignm identity: 206
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 251, 238

Conread position: 16-330
Cow position:
Alignm length: 316
Alignm identity: 208
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 251, 238

Conread position: 16-330
Cow position:
Alignm length: 316
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 142

Conread position: 19-325
Cow position:
Alignm length: 309
Alignm identity: 213
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 151, 161

Conread position: 20-329
Cow position:
Alignm length: 310
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 100, 0

Conread position: 22-330
Cow position:
Alignm length: 310
Alignm identity: 208
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 248, 233

Conread position: 23-310
Cow position:
Alignm length: 291
Alignm identity: 186
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 157, 105

Conread position: 23-326
Cow position:
Alignm length: 305
Alignm identity: 192
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 92, 100

Conread position: 24-253
Cow position:
Alignm length: 231
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 141, 152

Conread position: 24-304
Cow position:
Alignm length: 283
Alignm identity: 185
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 50, 75

Conread position: 24-329
Cow position:
Alignm length: 308
Alignm identity: 197
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 147, 152

Conread position: 24-329
Cow position:
Alignm length: 308
Alignm identity: 209
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 63, 67

Conread position: 24-329
Cow position:
Alignm length: 307
Alignm identity: 206
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 242, 231

Conread position: 24-329
Cow position:
Alignm length: 307
Alignm identity: 209
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 243, 220

Conread position: 24-329
Cow position:
Alignm length: 307
Alignm identity: 199
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 148, 152

Conread position: 24-329
Cow position:
Alignm length: 306
Alignm identity: 201
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 24-330
Cow position:
Alignm length: 308
Alignm identity: 205
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 248, 230

Conread position: 24-330
Cow position:
Alignm length: 308
Alignm identity: 212
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 251, 231

Conread position: 25-216
Cow position:
Alignm length: 192
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 25-326
Cow position:
Alignm length: 304
Alignm identity: 199
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 218, 239

Conread position: 25-326
Cow position:
Alignm length: 304
Alignm identity: 202
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 242, 235

Conread position: 25-329
Cow position:
Alignm length: 307
Alignm identity: 201
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 66, 75

Conread position: 25-329
Cow position:
Alignm length: 306
Alignm identity: 200
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 145, 151

Conread position: 25-329
Cow position:
Alignm length: 308
Alignm identity: 208
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 151, 136

Conread position: 25-330
Cow position:
Alignm length: 308
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 151

Conread position: 25-330
Cow position:
Alignm length: 306
Alignm identity: 206
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 26-329
Cow position:
Alignm length: 306
Alignm identity: 200
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 184, 177

Conread position: 27-329
Cow position:
Alignm length: 303
Alignm identity: 194
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 29-329
Cow position:
Alignm length: 302
Alignm identity: 199
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 105, 90

Conread position: 35-329
Cow position:
Alignm length: 296
Alignm identity: 193
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 232, 28

Conread position: 37-329
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 48, 55

Conread position: 41-329
Cow position:
Alignm length: 289
Alignm identity: 183
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 45-308
Cow position:
Alignm length: 266
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 46

Conread position: 46-330
Cow position:
Alignm length: 286
Alignm identity: 189
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 222, 208

Conread position: 60-330
Cow position:
Alignm length: 271
Alignm identity: 185
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 66-329
Cow position:
Alignm length: 266
Alignm identity: 183
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 104, 115

Show alignments to all cow chromosomes.