Cow genome map
| Conread name: | rpldo0106_i5.y1 |
| Conread position: | 4-329 |
| Cow position: | chr3:62722368-62722042 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 30 |
| Conread position: | 6-329 |
| Cow position: | chr3:68027135-68027459 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 12, 180 |
| Conread position: | 6-329 |
| Cow position: | chr3:68045728-68046052 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 12, 83 |
| Conread position: | 8-329 |
| Cow position: | chr3:62722112-62721790 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 9-305 |
| Cow position: | chr3:62721943-62721646 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 9-329 |
| Cow position: | chr3:62743059-62743375 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 11, 57 |
| Conread position: | 11-329 |
| Cow position: | chr3:77351108-77350797 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 109, 70 |
| Conread position: | 13-329 |
| Cow position: | chr3:62743143-62743459 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-330 |
| Cow position: | chr3:62722022-62721705 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 214 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 254, 245 |
| Conread position: | 16-253 |
| Cow position: | chr3:68046075-68046312 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-303 |
| Cow position: | chr3:62721851-62721564 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 252, 244 |
| Conread position: | 16-305 |
| Cow position: | chr3:68027482-68027769 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 150, 159 |
| Conread position: | 16-323 |
| Cow position: | chr3:62743230-62743534 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 149, 164 |
| Conread position: | 16-326 |
| Cow position: | chr3:62742416-62742723 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 177, 154 |
| Conread position: | 16-329 |
| Cow position: | chr3:62722187-62721874 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 243 |
| Conread position: | 16-329 |
| Cow position: | chr3:62722271-62721958 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 214 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 250, 239 |
| Conread position: | 16-329 |
| Cow position: | chr3:62742665-62742977 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 216, 73 |
| Conread position: | 16-329 |
| Cow position: | chr3:68027062-68027375 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-329 |
| Cow position: | chr3:68045655-68045968 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-329 |
| Cow position: | chr3:68045823-68046136 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 82 |
| Conread position: | 16-329 |
| Cow position: | chr3:68045991-68046304 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 149, 165 |
| Conread position: | 22-286 |
| Cow position: | chr3:77350852-77350591 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 235, 147 |
| Conread position: | 23-305 |
| Cow position: | chr3:62742754-62743032 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 125, 238 |
| Conread position: | 25-329 |
| Cow position: | chr3:68027323-68027627 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 20 |
| Conread position: | 30-329 |
| Cow position: | chr3:68045921-68046220 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 127, 145 |
Show alignments to all cow chromosomes.