Cow genome map

Conread name: rpldo0106_i5.y1

Conread position: 1-253
Cow position:
Alignm length: 256
Alignm identity: 169
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 14, 5

Conread position: 1-330
Cow position:
Alignm length: 331
Alignm identity: 212
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 262, 253

Conread position: 1-330
Cow position:
Alignm length: 331
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 175

Conread position: 3-329
Cow position:
Alignm length: 331
Alignm identity: 223
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 14, 167

Conread position: 5-329
Cow position:
Alignm length: 326
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 252

Conread position: 6-206
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 164, 170

Conread position: 6-303
Cow position:
Alignm length: 302
Alignm identity: 200
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 11, 80

Conread position: 6-329
Cow position:
Alignm length: 325
Alignm identity: 204
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 212

Conread position: 6-329
Cow position:
Alignm length: 325
Alignm identity: 215
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 86, 37

Conread position: 7-329
Cow position:
Alignm length: 323
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-329
Cow position:
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 247

Conread position: 7-329
Cow position:
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-330
Cow position:
Alignm length: 324
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 8-326
Cow position:
Alignm length: 322
Alignm identity: 212
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 10, 169

Conread position: 8-329
Cow position:
Alignm length: 323
Alignm identity: 219
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 10, 0

Conread position: 10-326
Cow position:
Alignm length: 318
Alignm identity: 209
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 7, 0

Conread position: 11-329
Cow position:
Alignm length: 320
Alignm identity: 217
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 165, 109

Conread position: 16-290
Cow position:
Alignm length: 276
Alignm identity: 184
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 149, 160

Conread position: 16-307
Cow position:
Alignm length: 294
Alignm identity: 190
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 79, 69

Conread position: 16-329
Cow position:
Alignm length: 315
Alignm identity: 206
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 251, 244

Conread position: 16-329
Cow position:
Alignm length: 317
Alignm identity: 217
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 78, 69

Conread position: 16-329
Cow position:
Alignm length: 316
Alignm identity: 215
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 149, 159

Conread position: 16-329
Cow position:
Alignm length: 315
Alignm identity: 205
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 80, 69

Conread position: 16-330
Cow position:
Alignm length: 318
Alignm identity: 217
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 79, 69

Conread position: 17-329
Cow position:
Alignm length: 319
Alignm identity: 215
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 151, 155

Conread position: 20-314
Cow position:
Alignm length: 295
Alignm identity: 196
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 23-273
Cow position:
Alignm length: 252
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 147, 153

Conread position: 23-306
Cow position:
Alignm length: 285
Alignm identity: 182
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 243, 230

Conread position: 23-329
Cow position:
Alignm length: 309
Alignm identity: 203
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 158, 162

Conread position: 23-329
Cow position:
Alignm length: 309
Alignm identity: 213
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 159, 171

Conread position: 24-262
Cow position:
Alignm length: 239
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 24-325
Cow position:
Alignm length: 302
Alignm identity: 206
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 24-325
Cow position:
Alignm length: 302
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 24-329
Cow position:
Alignm length: 307
Alignm identity: 192
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 208, 212

Conread position: 24-329
Cow position:
Alignm length: 308
Alignm identity: 190
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 72

Conread position: 24-329
Cow position:
Alignm length: 309
Alignm identity: 194
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 67, 82

Conread position: 24-329
Cow position:
Alignm length: 311
Alignm identity: 201
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 78, 61

Conread position: 24-329
Cow position:
Alignm length: 310
Alignm identity: 202
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 74, 68

Conread position: 24-330
Cow position:
Alignm length: 307
Alignm identity: 197
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 24-330
Cow position:
Alignm length: 308
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 231

Conread position: 25-329
Cow position:
Alignm length: 306
Alignm identity: 209
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 230, 241

Conread position: 25-329
Cow position:
Alignm length: 307
Alignm identity: 205
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 70, 63

Conread position: 25-329
Cow position:
Alignm length: 306
Alignm identity: 200
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 238, 230

Conread position: 25-329
Cow position:
Alignm length: 306
Alignm identity: 198
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 145, 151

Conread position: 30-330
Cow position:
Alignm length: 302
Alignm identity: 192
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 237, 230

Conread position: 36-304
Cow position:
Alignm length: 270
Alignm identity: 176
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 129, 139

Conread position: 41-329
Cow position:
Alignm length: 292
Alignm identity: 187
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 50

Conread position: 43-314
Cow position:
Alignm length: 274
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 147

Conread position: 45-329
Cow position:
Alignm length: 286
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 40

Conread position: 52-329
Cow position:
Alignm length: 279
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 12, 7

Show alignments to all cow chromosomes.