Cow genome map
| Conread name: | rpldo0106_i5.y1 |
| Conread position: | 1-326 |
| Cow position: | chr8:55580776-55581102 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 4-327 |
| Cow position: | chr8:45201481-45201803 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 12 |
| Conread position: | 4-329 |
| Cow position: | chr8:45201649-45201973 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 222 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 166, 6 |
| Conread position: | 4-330 |
| Cow position: | chr8:46816087-46816413 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 172 |
| Conread position: | 5-325 |
| Cow position: | chr8:55581116-55581437 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 12, 172 |
| Conread position: | 5-329 |
| Cow position: | chr8:46816423-46816748 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 172 |
| Conread position: | 6-308 |
| Cow position: | chr8:6958037-6957735 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 250 |
| Conread position: | 6-325 |
| Cow position: | chr8:45201146-45201465 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 11, 6 |
| Conread position: | 7-329 |
| Cow position: | chr8:48406830-48406507 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 10, 91 |
| Conread position: | 7-330 |
| Cow position: | chr8:46816762-46817085 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 88, 69 |
| Conread position: | 8-330 |
| Cow position: | chr8:48407417-48407094 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 224 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 10, 76 |
| Conread position: | 13-330 |
| Cow position: | chr8:46816012-46816329 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 161 |
| Conread position: | 13-330 |
| Cow position: | chr8:46816348-46816665 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 72 |
| Conread position: | 16-246 |
| Cow position: | chr8:45201744-45201974 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-325 |
| Cow position: | chr8:45201408-45201717 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 160 |
| Conread position: | 16-325 |
| Cow position: | chr8:48406568-48406259 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 61, 83 |
| Conread position: | 16-329 |
| Cow position: | chr8:45201324-45201637 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 160 |
| Conread position: | 16-330 |
| Cow position: | chr8:45201072-45201386 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 262, 243 |
| Conread position: | 17-330 |
| Cow position: | chr8:55581381-55581694 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 153, 159 |
| Conread position: | 21-211 |
| Cow position: | chr8:46817196-46817386 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-329 |
| Cow position: | chr8:48407151-48406843 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 74, 64 |
| Conread position: | 23-329 |
| Cow position: | chr8:48407569-48407263 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-329 |
| Cow position: | chr8:55581219-55581525 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 139, 157 |
| Conread position: | 24-326 |
| Cow position: | chr8:45201248-45201550 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-329 |
| Cow position: | chr8:55580968-55581273 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 243, 235 |
| Conread position: | 24-330 |
| Cow position: | chr8:46815936-46816245 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 91 |
| Conread position: | 24-330 |
| Cow position: | chr8:46816527-46816833 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 24-330 |
| Cow position: | chr8:46816863-46817169 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 99 |
| Conread position: | 24-330 |
| Cow position: | chr8:46816947-46817253 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 61 |
| Conread position: | 25-329 |
| Cow position: | chr8:46816276-46816580 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 136 |
| Conread position: | 25-329 |
| Cow position: | chr8:46816612-46816916 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-329 |
| Cow position: | chr8:46817032-46817336 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 229 |
| Conread position: | 29-324 |
| Cow position: | chr8:48407647-48407352 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 59, 47 |
| Conread position: | 29-329 |
| Cow position: | chr8:45200917-45201217 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 226, 231 |
| Conread position: | 30-329 |
| Cow position: | chr8:55580890-55581189 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 237, 229 |
| Conread position: | 45-330 |
| Cow position: | chr8:48406707-48406422 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.