Cow genome map


           Conread name:
           rpldo0106_i5.y1
        

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               4-327
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 12
               

               Conread position:
               4-329
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               222
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               166, 6
               

               Conread position:
               4-330
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 172
               

               Conread position:
               5-325
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               12, 172
               

               Conread position:
               5-329
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 172
               

               Conread position:
               6-308
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               11, 250
               

               Conread position:
               6-325
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               216
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               11, 6
               

               Conread position:
               7-329
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               10, 91
               

               Conread position:
               7-330
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               88, 69
               

               Conread position:
               8-330
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               10, 76
               

               Conread position:
               13-330
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 161
               

               Conread position:
               13-330
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 72
               

               Conread position:
               16-246
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               16-325
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 160
               

               Conread position:
               16-325
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               61, 83
               

               Conread position:
               16-329
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 160
               

               Conread position:
               16-330
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               262, 243
               

               Conread position:
               17-330
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               153, 159
               

               Conread position:
               21-211
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               21-329
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               74, 64
               

               Conread position:
               23-329
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               23-329
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               139, 157
               

               Conread position:
               24-326
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               24-329
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               243, 235
               

               Conread position:
               24-330
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 91
               

               Conread position:
               24-330
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 67
               

               Conread position:
               24-330
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 99
               

               Conread position:
               24-330
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 61
               

               Conread position:
               25-329
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 136
               

               Conread position:
               25-329
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-329
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 229
               

               Conread position:
               29-324
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               59, 47
               

               Conread position:
               29-329
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               226, 231
               

               Conread position:
               30-329
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               237, 229
               

               Conread position:
               45-330
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.