Cow genome map
| Conread name: | rpldo0106_i5.y1 |
| Conread position: | 1-224 |
| Cow position: | chrX:29044885-29044662 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-329 |
| Cow position: | chrX:29045221-29044893 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 175 |
| Conread position: | 2-330 |
| Cow position: | chrX:13826656-13826328 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-329 |
| Cow position: | chrX:25309764-25310089 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 81 |
| Conread position: | 4-329 |
| Cow position: | chrX:25309932-25310257 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 223 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 157, 177 |
| Conread position: | 4-330 |
| Cow position: | chrX:29045700-29045375 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 157, 9 |
| Conread position: | 5-329 |
| Cow position: | chrX:29045133-29044809 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 246 |
| Conread position: | 7-314 |
| Cow position: | chrX:25310271-25310578 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-316 |
| Cow position: | chrX:13826819-13826510 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 95, 69 |
| Conread position: | 7-329 |
| Cow position: | chrX:25309850-25310173 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 251 |
| Conread position: | 7-329 |
| Cow position: | chrX:29045047-29044725 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-329 |
| Cow position: | chrX:25324953-25324632 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 109 |
| Conread position: | 13-330 |
| Cow position: | chrX:25325536-25325219 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 163 |
| Conread position: | 16-318 |
| Cow position: | chrX:29044954-29044652 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-329 |
| Cow position: | chrX:25310112-25310425 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 154, 168 |
| Conread position: | 16-329 |
| Cow position: | chrX:25310196-25310509 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 238, 251 |
| Conread position: | 16-329 |
| Cow position: | chrX:25324777-25324464 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-329 |
| Cow position: | chrX:25309697-25310005 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 232 |
| Conread position: | 23-329 |
| Cow position: | chrX:29045283-29044977 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-304 |
| Cow position: | chrX:25324517-25324237 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 117, 93 |
| Conread position: | 24-330 |
| Cow position: | chrX:25324853-25324547 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 151 |
| Conread position: | 24-330 |
| Cow position: | chrX:25325189-25324883 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 134 |
| Conread position: | 24-330 |
| Cow position: | chrX:25325357-25325051 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 152 |
| Conread position: | 25-324 |
| Cow position: | chrX:25324600-25324301 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 209 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 71, 51 |
| Conread position: | 25-329 |
| Cow position: | chrX:25310037-25310341 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-329 |
| Cow position: | chrX:25325776-25325472 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 147, 151 |
| Conread position: | 25-330 |
| Cow position: | chrX:25325272-25324967 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 30-329 |
| Cow position: | chrX:25325435-25325136 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 31-325 |
| Cow position: | chrX:29045758-29045464 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 145 |
| Conread position: | 41-329 |
| Cow position: | chrX:25325592-25325304 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 134 |
| Conread position: | 76-329 |
| Cow position: | chrX:25309668-25309921 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 26, 16 |
Show alignments to all cow chromosomes.