Cow genome map
| Conread name: | rpldo0124_d6.y1 |
| Conread position: | 3-259 |
| Cow position: | chrX:25341326-25341052 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 137, 93 |
| Conread position: | 3-263 |
| Cow position: | chrX:41920031-41919776 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 122, 22 |
| Conread position: | 7-269 |
| Cow position: | chrX:20655049-20654774 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 44 |
| Conread position: | 14-268 |
| Cow position: | chrX:39288012-39288274 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 64, 115 |
| Conread position: | 14-269 |
| Cow position: | chrX:29024611-29024340 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 15-254 |
| Cow position: | chrX:489246-489003 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 77 |
| Conread position: | 15-259 |
| Cow position: | chrX:31785580-31785333 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 7, 118 |
| Conread position: | 16-267 |
| Cow position: | chrX:40323278-40323019 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 123, 78 |
| Conread position: | 21-269 |
| Cow position: | chrX:40509988-40509743 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 119, 46 |
| Conread position: | 22-268 |
| Cow position: | chrX:23683329-23683071 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 23-269 |
| Cow position: | chrX:46092281-46092538 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 6 |
| Conread position: | 29-253 |
| Cow position: | chrX:11184739-11184503 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 29-269 |
| Cow position: | chrX:16554255-16554005 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 32-269 |
| Cow position: | chrX:874089-873838 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 107, 125 |
| Conread position: | 38-268 |
| Cow position: | chrX:19557139-19556898 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 102, 182 |
| Conread position: | 50-256 |
| Cow position: | chrX:39315765-39315981 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 126 |
| Conread position: | 52-269 |
| Cow position: | chrX:17968732-17968955 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 73, 54 |
Show alignments to all cow chromosomes.