Cow genome map

Conread name: rpldo0136_h2.y1

Conread position: 40-452
Cow position: chr11:33347959-33348374 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 39

Conread position: 48-564
Cow position: chr11:43525921-43526409 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 346
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 13, 29

Conread position: 53-466
Cow position: chr11:81300391-81300812 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 279
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 39, 258

Conread position: 53-467
Cow position: chr11:2907316-2907722 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 279
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 25, 69

Conread position: 64-466
Cow position: chr11:866484-866100 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 270
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 107, 15

Conread position: 65-460
Cow position: chr11:38334725-38334321 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 275
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 68

Conread position: 67-262
Cow position: chr11:58186073-58185886 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 163, 22

Conread position: 67-458
Cow position: chr11:8988028-8988420 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 55

Conread position: 67-466
Cow position: chr11:6233664-6234078 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 331

Conread position: 67-525
Cow position: chr11:52380669-52381146 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 315
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 47

Conread position: 67-541
Cow position: chr11:19891052-19890595 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 320
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 98

Conread position: 68-422
Cow position: chr11:6202657-6202288 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 43, 98

Conread position: 69-399
Cow position: chr11:70206514-70206189 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 101, 20

Conread position: 70-538
Cow position: chr11:17859954-17860440 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 43

Conread position: 71-452
Cow position: chr11:4207509-4207124 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 253
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 83, 38

Conread position: 71-462
Cow position: chr11:65607483-65607889 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 10

Conread position: 71-542
Cow position: chr11:22977687-22978149 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 8

Conread position: 71-559
Cow position: chr11:22931799-22932272 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 338
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 104, 34

Conread position: 72-452
Cow position: chr11:37804354-37804743 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 265
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 19, 49

Conread position: 72-466
Cow position: chr11:47899457-47899077 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 30

Conread position: 72-466
Cow position: chr11:81138410-81138026 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 265
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 103

Conread position: 73-460
Cow position: chr11:7574502-7574131 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 251
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 44, 76

Conread position: 73-463
Cow position: chr11:21843942-21844332 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 41

Conread position: 75-460
Cow position: chr11:63433862-63434252 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 25

Conread position: 75-466
Cow position: chr11:17321843-17321458 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 268
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 29, 44

Conread position: 75-539
Cow position: chr11:38236446-38235954 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 332
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 41, 17

Conread position: 75-540
Cow position: chr11:77683357-77682889 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 86

Conread position: 76-364
Cow position: chr11:50937558-50937848 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 199
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 40, 18

Conread position: 76-419
Cow position: chr11:63435726-63435362 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 210

Conread position: 76-460
Cow position: chr11:15467650-15467276 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 248
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 40, 55

Conread position: 76-461
Cow position: chr11:80923133-80923524 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 271
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 98, 44

Conread position: 76-462
Cow position: chr11:70600628-70601019 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 267
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 40, 18

Conread position: 76-466
Cow position: chr11:30476188-30475799 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 55

Conread position: 76-498
Cow position: chr11:2084351-2083899 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 76-538
Cow position: chr11:64029064-64029542 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 321
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 40, 33

Conread position: 77-270
Cow position: chr11:45671179-45671369 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 40, 20

Conread position: 77-474
Cow position: chr11:35724173-35723769 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 265
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 39, 221

Conread position: 78-287
Cow position: chr11:79884666-79884467 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 152, 41

Conread position: 78-433
Cow position: chr11:41133878-41134235 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 36, 111

Conread position: 78-537
Cow position: chr11:43646239-43646704 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 338
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 152, 40

Conread position: 79-245
Cow position: chr11:38223592-38223767 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 131

Conread position: 79-282
Cow position: chr11:9699055-9699261 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 23

Conread position: 79-289
Cow position: chr11:3797903-3797694 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 20

Conread position: 79-300
Cow position: chr11:15366775-15367007 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 202

Conread position: 79-356
Cow position: chr11:9368995-9368734 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 132, 12

Conread position: 79-370
Cow position: chr11:18785706-18785979 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 238, 39

Conread position: 79-371
Cow position: chr11:30211075-30210799 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 151, 36

Conread position: 79-372
Cow position: chr11:63998890-63999198 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 37, 23

Conread position: 79-372
Cow position: chr11:67871422-67871713 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 202
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 85

Conread position: 79-374
Cow position: chr11:42067064-42066750 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 23

Conread position: 79-390
Cow position: chr11:27719148-27719449 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 5, 37

Conread position: 79-416
Cow position: chr11:32254015-32254371 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 6, 31

Conread position: 79-423
Cow position: chr11:32693304-32693631 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 151, 47

Conread position: 79-433
Cow position: chr11:45435277-45434918 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 239
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 24, 63

Conread position: 79-433
Cow position: chr11:75874572-75874921 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 23

Conread position: 79-451
Cow position: chr11:83926221-83925855 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 264
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 198, 40

Conread position: 79-452
Cow position: chr11:62620576-62620195 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 266
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 23

Conread position: 79-462
Cow position: chr11:55053064-55052686 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 271
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 37, 47

Conread position: 79-463
Cow position: chr11:84385433-84385843 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 285
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 28, 203

Conread position: 79-466
Cow position: chr11:30192367-30191970 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 258
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 12

Conread position: 79-466
Cow position: chr11:39462819-39462418 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 30

Conread position: 79-466
Cow position: chr11:53778820-53778413 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 23

Conread position: 79-476
Cow position: chr11:19591796-19592208 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 283
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 86, 30

Conread position: 79-520
Cow position: chr11:44223071-44222630 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 297
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 95, 41

Conread position: 80-358
Cow position: chr11:67911969-67912247 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 185
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 144, 15

Conread position: 80-431
Cow position: chr11:45619552-45619182 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 243
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 222

Conread position: 80-466
Cow position: chr11:36647516-36647161 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 35

Conread position: 80-466
Cow position: chr11:58588528-58588145 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 73

Conread position: 80-466
Cow position: chr11:80819822-80820198 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 254
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 37, 20

Conread position: 80-466
Cow position: chr11:81162249-81162631 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 266
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 40, 26

Conread position: 80-536
Cow position: chr11:1485661-1486155 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 324
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 36, 126

Conread position: 80-541
Cow position: chr11:35882080-35881619 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 33

Conread position: 80-543
Cow position: chr11:65826565-65827025 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 309
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 37, 69

Conread position: 81-311
Cow position: chr11:30172498-30172264 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 172

Conread position: 81-311
Cow position: chr11:77013968-77013739 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 35, 21

Conread position: 81-375
Cow position: chr11:29659761-29659451 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 205
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 51

Conread position: 81-377
Cow position: chr11:39060406-39060714 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 203
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 36, 134

Conread position: 81-391
Cow position: chr11:40608405-40608724 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 208
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 80, 41

Conread position: 81-391
Cow position: chr11:47837509-47837186 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 214
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 60

Conread position: 81-399
Cow position: chr11:70756675-70756345 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 237
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 11, 183

Conread position: 81-402
Cow position: chr11:52690336-52690661 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 10, 42

Conread position: 81-411
Cow position: chr11:27907969-27907640 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 231
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 134

Conread position: 81-421
Cow position: chr11:40395638-40395282 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 237
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 205

Conread position: 81-437
Cow position: chr11:67600966-67600609 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 27

Conread position: 81-450
Cow position: chr11:69402083-69402434 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 254
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 145, 26

Conread position: 81-452
Cow position: chr11:25620202-25620585 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 264
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 82, 37

Conread position: 81-459
Cow position: chr11:31413655-31413258 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 260
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 21

Conread position: 81-460
Cow position: chr11:59903089-59902694 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 256
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 78, 126

Conread position: 81-463
Cow position: chr11:15772515-15772919 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 21

Conread position: 81-466
Cow position: chr11:27404883-27405268 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 270
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 37, 52

Conread position: 81-466
Cow position: chr11:27747106-27746721 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 92, 37

Conread position: 81-466
Cow position: chr11:58102569-58102974 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 280
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 68

Conread position: 81-466
Cow position: chr11:63065850-63065454 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 274
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 35, 21

Conread position: 81-467
Cow position: chr11:42083641-42083279 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 29

Conread position: 81-467
Cow position: chr11:63156756-63157113 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 264
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 149, 34

Conread position: 81-474
Cow position: chr11:45276960-45277365 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 266
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 170

Conread position: 81-485
Cow position: chr11:11558356-11557947 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 257
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 67, 28

Conread position: 81-487
Cow position: chr11:2917395-2917817 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 282
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 25, 127

Conread position: 81-504
Cow position: chr11:49153128-49152699 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 38

Conread position: 81-507
Cow position: chr11:31228141-31227737 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 284
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 149, 26

Conread position: 81-520
Cow position: chr11:19247006-19247466 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 54

Conread position: 81-529
Cow position: chr11:83043179-83043640 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 311
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 84, 27

Conread position: 81-536
Cow position: chr11:17889539-17890009 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 314
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 69, 33

Conread position: 81-536
Cow position: chr11:18699069-18698588 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 81-536
Cow position: chr11:44032204-44031713 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 326
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 35, 21

Conread position: 81-536
Cow position: chr11:48672902-48672422 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 315
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 93

Conread position: 81-539
Cow position: chr11:11125853-11125375 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 39

Conread position: 81-542
Cow position: chr11:77745048-77745546 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 338
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 20, 210

Conread position: 81-571
Cow position: chr11:18484013-18484480 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 32

Conread position: 82-234
Cow position: chr11:82732963-82733116 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 83, 30

Conread position: 82-366
Cow position: chr11:80412822-80413114 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 200
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 35

Conread position: 82-389
Cow position: chr11:13940385-13940066 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 223
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 34, 71

Conread position: 82-436
Cow position: chr11:70978548-70978907 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 257
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 88, 36

Conread position: 82-466
Cow position: chr11:20238863-20238474 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 266
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 36, 51

Conread position: 82-466
Cow position: chr11:43360600-43360996 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 37

Conread position: 82-466
Cow position: chr11:50152626-50153018 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 274
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 36, 51

Conread position: 82-466
Cow position: chr11:68913341-68912943 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 266
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 34, 186

Conread position: 82-483
Cow position: chr11:41272305-41271925 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 31

Conread position: 82-521
Cow position: chr11:46746823-46746364 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 310
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 66, 36

Conread position: 82-524
Cow position: chr11:17278496-17278936 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 40

Conread position: 82-531
Cow position: chr11:84775289-84774836 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 300
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 76, 40

Conread position: 82-536
Cow position: chr11:42016440-42016925 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 185

Conread position: 83-352
Cow position: chr11:32398827-32398548 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 132

Conread position: 83-423
Cow position: chr11:71390378-71390723 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 233
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 33, 15

Conread position: 83-431
Cow position: chr11:80556404-80556053 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 230
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 46

Conread position: 83-437
Cow position: chr11:76890236-76889875 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 239
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 99, 10

Conread position: 83-444
Cow position: chr11:9270552-9270908 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 36

Conread position: 83-458
Cow position: chr11:75479828-75480222 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 275
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 33, 11

Conread position: 83-462
Cow position: chr11:258987-259376 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 263
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 82, 26

Conread position: 83-463
Cow position: chr11:65762399-65762793 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 266
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 78, 17

Conread position: 83-466
Cow position: chr11:52297037-52297423 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 29

Conread position: 83-467
Cow position: chr11:11752350-11752720 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 262
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 222, 32

Conread position: 83-571
Cow position: chr11:71805969-71806443 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 84

Conread position: 84-399
Cow position: chr11:62789321-62788993 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 210
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 9

Conread position: 84-458
Cow position: chr11:74316902-74316519 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 258
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 32, 223

Conread position: 84-536
Cow position: chr11:34963253-34962776 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 320
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 21, 30

Conread position: 84-542
Cow position: chr11:23251403-23251892 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 338
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 33, 51

Conread position: 84-546
Cow position: chr11:13500195-13499718 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 77

Conread position: 85-228
Cow position: chr11:3267473-3267616 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 98

Conread position: 85-278
Cow position: chr11:48900665-48900857 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 31, 17

Conread position: 85-421
Cow position: chr11:55494859-55494522 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 234
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 31, 50

Conread position: 85-456
Cow position: chr11:6245518-6245120 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 272
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 13, 198

Conread position: 85-463
Cow position: chr11:35153636-35154024 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 261
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 28, 57

Conread position: 85-524
Cow position: chr11:64044412-64043974 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 96

Conread position: 85-538
Cow position: chr11:78380874-78381330 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 320
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 31, 189

Conread position: 85-540
Cow position: chr11:48932405-48932873 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 22

Conread position: 86-466
Cow position: chr11:77758577-77758960 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 265
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 5, 28

Conread position: 87-460
Cow position: chr11:2874584-2874192 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 249
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 87-463
Cow position: chr11:45646406-45646790 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 261
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 78, 12

Conread position: 87-474
Cow position: chr11:12111283-12111675 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 81

Conread position: 88-545
Cow position: chr11:30708696-30708204 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 339
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 28, 21

Conread position: 89-466
Cow position: chr11:41215923-41215544 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 277
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 27, 13

Conread position: 91-462
Cow position: chr11:27248666-27248296 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 247
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 42

Conread position: 91-562
Cow position: chr11:10992447-10991968 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 319
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 80, 26

Conread position: 95-466
Cow position: chr11:24602148-24601771 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 259
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 23, 231

Conread position: 97-394
Cow position: chr11:57873991-57873699 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 81

Conread position: 97-405
Cow position: chr11:48429300-48428964 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 226
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 97-463
Cow position: chr11:81143362-81143755 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 259
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 12

Conread position: 97-537
Cow position: chr11:48474881-48474423 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 449

Conread position: 99-354
Cow position: chr11:41603520-41603780 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 17, 68

Conread position: 99-371
Cow position: chr11:6194569-6194300 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 207
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 17, 96

Conread position: 99-406
Cow position: chr11:61349032-61348745 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 32

Conread position: 99-506
Cow position: chr11:19268930-19269327 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 273
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 69

Conread position: 99-534
Cow position: chr11:65495163-65495610 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 144

Conread position: 100-536
Cow position: chr11:21852136-21852570 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 67

Conread position: 102-274
Cow position: chr11:46784641-46784466 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 143

Conread position: 102-314
Cow position: chr11:63485110-63484898 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 14, 157

Conread position: 102-372
Cow position: chr11:21136972-21136704 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 14, 62

Conread position: 102-374
Cow position: chr11:249327-249595 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 51

Conread position: 102-421
Cow position: chr11:17493660-17493321 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 236
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 23, 50

Conread position: 102-426
Cow position: chr11:51729452-51729126 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 60

Conread position: 102-452
Cow position: chr11:21728111-21728457 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 233
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 15, 121

Conread position: 102-462
Cow position: chr11:35580439-35580058 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 250
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 102-463
Cow position: chr11:71492686-71493057 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 176

Conread position: 102-466
Cow position: chr11:66188143-66188520 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 29

Conread position: 102-466
Cow position: chr11:77546574-77546219 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 241
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 128, 17

Conread position: 102-515
Cow position: chr11:32438794-32439214 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 281
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 58

Conread position: 102-524
Cow position: chr11:51687558-51688000 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 286
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 14, 36

Conread position: 103-534
Cow position: chr11:13061077-13061506 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 295
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 13, 46

Conread position: 106-411
Cow position: chr11:85703863-85703558 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 119

Conread position: 108-320
Cow position: chr11:39250136-39249918 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 102

Conread position: 108-435
Cow position: chr11:30209651-30209992 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 224
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 155

Conread position: 109-466
Cow position: chr11:34144748-34145116 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 80

Conread position: 112-460
Cow position: chr11:63202081-63202433 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 247
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 240

Conread position: 114-375
Cow position: chr11:84890565-84890834 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 6

Conread position: 114-561
Cow position: chr11:17227487-17227950 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 143

Conread position: 115-288
Cow position: chr11:64409129-64408954 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 84

Conread position: 115-291
Cow position: chr11:80586429-80586248 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 139

Conread position: 115-314
Cow position: chr11:27449469-27449659 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 162, 45

Conread position: 115-347
Cow position: chr11:41313499-41313740 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 49, 18

Conread position: 115-354
Cow position: chr11:19586604-19586364 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 42

Conread position: 115-354
Cow position: chr11:69696784-69697016 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 27

Conread position: 115-357
Cow position: chr11:4199437-4199179 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 55, 144

Conread position: 115-373
Cow position: chr11:54133944-54134181 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 115, 47

Conread position: 115-387
Cow position: chr11:62742485-62742760 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 144

Conread position: 115-392
Cow position: chr11:31506991-31506717 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 99, 26

Conread position: 115-410
Cow position: chr11:49057546-49057256 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 217
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 49, 121

Conread position: 115-428
Cow position: chr11:80756627-80756948 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 206
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 115-437
Cow position: chr11:70951030-70950709 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 215
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 163

Conread position: 115-438
Cow position: chr11:71009270-71008961 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 243
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 115, 41

Conread position: 115-439
Cow position: chr11:16232791-16233111 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 222
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 115, 47

Conread position: 115-439
Cow position: chr11:28993585-28993904 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 179

Conread position: 115-451
Cow position: chr11:66572329-66572688 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 171

Conread position: 115-452
Cow position: chr11:40818469-40818828 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 256
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 60, 187

Conread position: 115-458
Cow position: chr11:13592902-13592542 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 58, 269

Conread position: 115-460
Cow position: chr11:5486179-5485814 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 200

Conread position: 115-460
Cow position: chr11:8496196-8495843 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 75, 185

Conread position: 115-460
Cow position: chr11:30638789-30639142 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 248
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 48, 223

Conread position: 115-461
Cow position: chr11:26535947-26535580 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 223

Conread position: 115-463
Cow position: chr11:14470524-14470174 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 251
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 58, 158

Conread position: 115-463
Cow position: chr11:56729098-56728750 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 230
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 65

Conread position: 115-466
Cow position: chr11:10095506-10095145 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 148

Conread position: 115-466
Cow position: chr11:38639262-38638921 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 61

Conread position: 115-466
Cow position: chr11:39115636-39115294 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 231
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 138, 94

Conread position: 115-466
Cow position: chr11:45631617-45631964 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 46

Conread position: 115-466
Cow position: chr11:55744632-55744274 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 248
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 92

Conread position: 115-466
Cow position: chr11:69811044-69810704 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 254
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 112, 64

Conread position: 115-506
Cow position: chr11:68904925-68905319 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 45

Conread position: 115-518
Cow position: chr11:62573865-62574267 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 274
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 88, 46

Conread position: 115-521
Cow position: chr11:47193657-47193252 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 287
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 118, 47

Conread position: 115-531
Cow position: chr11:18572946-18572522 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 51

Conread position: 115-534
Cow position: chr11:15504272-15503815 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 298
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 91, 145

Conread position: 115-534
Cow position: chr11:18508866-18509295 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 150

Conread position: 115-534
Cow position: chr11:47755217-47755649 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 283
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 47, 172

Conread position: 115-534
Cow position: chr11:73353904-73354340 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 152

Conread position: 115-535
Cow position: chr11:30934555-30934144 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 304
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 115, 30

Conread position: 115-535
Cow position: chr11:60301814-60302241 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 287
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 58, 30

Conread position: 115-536
Cow position: chr11:77705913-77705478 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 114

Conread position: 115-537
Cow position: chr11:8524955-8525393 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 290
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 60, 221

Conread position: 115-537
Cow position: chr11:41985885-41986331 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 268

Conread position: 115-540
Cow position: chr11:68909690-68910139 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 239

Conread position: 115-540
Cow position: chr11:86925800-86926205 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 300
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 280, 78

Conread position: 115-543
Cow position: chr11:13042985-13043440 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 262

Conread position: 115-543
Cow position: chr11:42359256-42358837 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 304
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 114, 12

Conread position: 115-561
Cow position: chr11:49149209-49148739 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 244

Conread position: 115-575
Cow position: chr11:55762020-55761553 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 75

Conread position: 116-229
Cow position: chr11:67344659-67344771 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 50

Conread position: 116-269
Cow position: chr11:62566990-62566835 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 116-374
Cow position: chr11:63919905-63920159 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 114, 31

Conread position: 116-415
Cow position: chr11:84228561-84228865 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 205
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 54, 125

Conread position: 116-427
Cow position: chr11:64048552-64048255 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 114, 15

Conread position: 116-452
Cow position: chr11:48544598-48544253 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 246
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 245

Conread position: 116-463
Cow position: chr11:29960455-29960108 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 49, 143

Conread position: 116-466
Cow position: chr11:67345497-67345842 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 243
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 49, 152

Conread position: 116-504
Cow position: chr11:34467724-34467348 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 283
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 54, 155

Conread position: 116-510
Cow position: chr11:83398069-83397644 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 286
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 68, 0

Conread position: 117-232
Cow position: chr11:2310228-2310111 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 117-413
Cow position: chr11:62663081-62663370 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 12

Conread position: 117-437
Cow position: chr11:8544855-8545186 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 242
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 48, 145

Conread position: 118-278
Cow position: chr11:79707863-79707701 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 103

Conread position: 118-355
Cow position: chr11:30370262-30370016 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 142

Conread position: 118-370
Cow position: chr11:8584475-8584214 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 169
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 195, 0

Conread position: 118-537
Cow position: chr11:63519154-63518728 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 287
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 88, 156

Conread position: 120-305
Cow position: chr11:58927731-58927544 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 82

Conread position: 120-467
Cow position: chr11:38071502-38071153 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 224
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 179, 27

Conread position: 122-349
Cow position: chr11:27565477-27565250 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 11, 129

Conread position: 122-439
Cow position: chr11:82940469-82940797 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 11, 80

Conread position: 124-402
Cow position: chr11:48660084-48659793 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 79

Conread position: 124-466
Cow position: chr11:87155675-87155315 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 147

Conread position: 125-466
Cow position: chr11:11469500-11469833 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 236
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 132

Conread position: 126-439
Cow position: chr11:30830466-30830791 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 49, 0

Conread position: 126-483
Cow position: chr11:26143942-26144318 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 81

Conread position: 126-544
Cow position: chr11:49934591-49935038 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 52

Conread position: 127-545
Cow position: chr11:68206695-68207131 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 300
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 48, 176

Conread position: 129-463
Cow position: chr11:65409022-65409354 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 47

Conread position: 129-545
Cow position: chr11:41549184-41549623 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 297
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 41, 160

Conread position: 130-443
Cow position: chr11:47004481-47004171 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 50, 14

Conread position: 132-313
Cow position: chr11:35669811-35670000 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 90

Conread position: 132-354
Cow position: chr11:35536730-35536497 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 33, 121

Conread position: 132-463
Cow position: chr11:36112564-36112221 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 143

Conread position: 132-466
Cow position: chr11:4662908-4663238 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 31, 63

Conread position: 132-547
Cow position: chr11:13040036-13040457 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 295
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 94, 120

Conread position: 133-309
Cow position: chr11:84977220-84977402 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 133-536
Cow position: chr11:20602363-20601953 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 214

Conread position: 134-416
Cow position: chr11:48306223-48306496 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 96, 31

Conread position: 134-439
Cow position: chr11:63909532-63909833 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 14, 133

Conread position: 134-535
Cow position: chr11:34113406-34112988 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 275

Conread position: 138-461
Cow position: chr11:59873063-59872736 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 295

Conread position: 142-533
Cow position: chr11:46580493-46580083 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 266
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 122

Conread position: 145-437
Cow position: chr11:39118878-39118585 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 31

Conread position: 145-444
Cow position: chr11:70086461-70086144 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 20, 112

Conread position: 145-470
Cow position: chr11:7590311-7589987 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 36

Conread position: 147-466
Cow position: chr11:38874285-38874602 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 46

Conread position: 153-447
Cow position: chr11:30955115-30954815 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 207
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 77, 106

Conread position: 153-452
Cow position: chr11:59702606-59702295 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 208
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 19, 213

Conread position: 153-460
Cow position: chr11:61958630-61958943 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 41

Conread position: 153-507
Cow position: chr11:77128775-77128411 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 212

Conread position: 153-536
Cow position: chr11:70609911-70609503 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 281
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 81, 27

Conread position: 153-562
Cow position: chr11:67246899-67246514 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 292
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 77, 5

Conread position: 155-392
Cow position: chr11:83033127-83033366 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 156, 52

Conread position: 155-470
Cow position: chr11:36238890-36238578 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 98

Conread position: 156-452
Cow position: chr11:77750660-77750957 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 40

Conread position: 157-567
Cow position: chr11:21497633-21497224 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 242
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 253

Conread position: 158-423
Cow position: chr11:35775446-35775179 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 175
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 72, 11

Conread position: 158-467
Cow position: chr11:64905106-64904795 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 11

Conread position: 158-533
Cow position: chr11:20491676-20491290 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 264
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 67, 12

Conread position: 158-537
Cow position: chr11:19238057-19238442 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 269
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 23

Conread position: 159-431
Cow position: chr11:16540972-16540695 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 17, 223

Conread position: 159-467
Cow position: chr11:8840648-8840941 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 21

Conread position: 160-450
Cow position: chr11:33311087-33310783 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 14, 189

Conread position: 160-466
Cow position: chr11:9221626-9221925 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 8

Conread position: 160-518
Cow position: chr11:34032092-34032464 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 263
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 24, 7

Conread position: 160-524
Cow position: chr11:25331637-25332003 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 255
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 30, 40

Conread position: 161-340
Cow position: chr11:70826055-70825874 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 161-413
Cow position: chr11:4652866-4653126 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 68, 208

Conread position: 161-431
Cow position: chr11:40478746-40479022 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 134

Conread position: 161-431
Cow position: chr11:63917368-63917634 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 148

Conread position: 161-435
Cow position: chr11:16906942-16907214 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 94

Conread position: 161-438
Cow position: chr11:36658717-36658992 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 69, 26

Conread position: 161-441
Cow position: chr11:71501025-71501312 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 11, 27

Conread position: 161-444
Cow position: chr11:38577672-38577949 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 69, 84

Conread position: 161-450
Cow position: chr11:70278004-70278296 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 25, 135

Conread position: 161-463
Cow position: chr11:32436441-32436132 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 19, 130

Conread position: 161-463
Cow position: chr11:72375569-72375885 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 161-466
Cow position: chr11:70838183-70838502 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 222
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 144, 47

Conread position: 161-467
Cow position: chr11:48650892-48650592 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 131, 37

Conread position: 161-534
Cow position: chr11:54334435-54334050 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 154

Conread position: 161-535
Cow position: chr11:62150787-62151165 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 256
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 69, 90

Conread position: 161-536
Cow position: chr11:63847951-63847565 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 27

Conread position: 161-537
Cow position: chr11:80530465-80530083 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 81

Conread position: 161-547
Cow position: chr11:17831114-17831523 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 110

Conread position: 161-562
Cow position: chr11:60470092-60470493 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 303
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 69, 26

Conread position: 161-568
Cow position: chr11:67804849-67804439 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 52

Conread position: 162-535
Cow position: chr11:76114748-76114369 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 53

Conread position: 163-390
Cow position: chr11:33345554-33345317 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 92

Conread position: 164-466
Cow position: chr11:61454413-61454734 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 66, 84

Conread position: 164-467
Cow position: chr11:14308742-14308437 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 35

Conread position: 166-352
Cow position: chr11:62778543-62778358 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 86

Conread position: 166-370
Cow position: chr11:14466385-14466595 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 87

Conread position: 166-394
Cow position: chr11:64867920-64868145 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 64, 14

Conread position: 166-423
Cow position: chr11:63499213-63499483 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 166-445
Cow position: chr11:71341363-71341633 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 210

Conread position: 166-452
Cow position: chr11:48650074-48649788 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 214
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 59, 149

Conread position: 166-461
Cow position: chr11:23232418-23232708 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 58

Conread position: 166-462
Cow position: chr11:5031673-5031973 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 88

Conread position: 166-466
Cow position: chr11:83230299-83230587 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 60, 87

Conread position: 166-533
Cow position: chr11:53147430-53147823 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 275
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 70

Conread position: 166-536
Cow position: chr11:44636651-44637047 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 94

Conread position: 166-537
Cow position: chr11:73512342-73512707 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 27

Conread position: 166-543
Cow position: chr11:83066589-83066202 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 86

Conread position: 167-446
Cow position: chr11:40573235-40573516 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 69, 96

Conread position: 167-452
Cow position: chr11:63482328-63482615 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 29

Conread position: 167-455
Cow position: chr11:77118800-77118521 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 96

Conread position: 167-524
Cow position: chr11:62155739-62155356 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 274
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 64, 92

Conread position: 167-534
Cow position: chr11:76606773-76606405 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 266
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 64, 150

Conread position: 167-543
Cow position: chr11:33414337-33413941 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 265
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 63, 256

Conread position: 167-545
Cow position: chr11:1362367-1362777 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 168-462
Cow position: chr11:30879766-30879484 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 65, 12

Conread position: 168-466
Cow position: chr11:56518212-56518512 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 29

Conread position: 168-539
Cow position: chr11:50073037-50072681 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 266
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 62, 146

Conread position: 169-314
Cow position: chr11:34692951-34692805 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 9

Conread position: 169-466
Cow position: chr11:43898236-43897938 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 61, 11

Conread position: 171-394
Cow position: chr11:46953044-46952820 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 45, 135

Conread position: 171-463
Cow position: chr11:377545-377845 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 171-466
Cow position: chr11:35684405-35684697 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 59, 20

Conread position: 171-515
Cow position: chr11:1157740-1157405 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 238
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 54, 82

Conread position: 171-538
Cow position: chr11:36849013-36848656 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 250
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 23

Conread position: 171-546
Cow position: chr11:21894066-21894447 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 264
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 25

Conread position: 171-591
Cow position: chr11:8147802-8148234 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 127

Conread position: 172-371
Cow position: chr11:46999074-46998877 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 98

Conread position: 172-413
Cow position: chr11:86720322-86720561 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 12, 45

Conread position: 172-463
Cow position: chr11:23586734-23586438 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 183

Conread position: 172-466
Cow position: chr11:23128444-23128739 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 258

Conread position: 172-537
Cow position: chr11:18086252-18086625 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 155, 70

Conread position: 172-538
Cow position: chr11:71868507-71868890 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 268
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 33, 38

Conread position: 172-540
Cow position: chr11:29946818-29947217 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 245

Conread position: 172-545
Cow position: chr11:23137958-23138357 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 65

Conread position: 173-521
Cow position: chr11:44234450-44234087 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 247
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 57, 213

Conread position: 173-535
Cow position: chr11:40258317-40258681 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 74

Conread position: 173-538
Cow position: chr11:25387163-25386784 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 255
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 57, 369

Conread position: 174-452
Cow position: chr11:36799214-36799488 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 52, 24

Conread position: 178-535
Cow position: chr11:64638436-64638809 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 52, 72

Conread position: 179-466
Cow position: chr11:36987038-36986762 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 217
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 51, 73

Conread position: 179-545
Cow position: chr11:33527141-33526783 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 256
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 51, 166

Conread position: 180-524
Cow position: chr11:33341057-33341420 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 114

Conread position: 180-528
Cow position: chr11:34829698-34830058 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 258
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 70

Conread position: 180-531
Cow position: chr11:66424792-66425155 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 243
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 49, 27

Conread position: 180-533
Cow position: chr11:55333997-55333626 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 253
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 46, 365

Conread position: 180-540
Cow position: chr11:35873915-35874273 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 248
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 70

Conread position: 180-543
Cow position: chr11:48496505-48496859 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 45, 151

Conread position: 181-466
Cow position: chr11:50778454-50778171 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 50, 114

Conread position: 181-467
Cow position: chr11:45897962-45898256 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 181-520
Cow position: chr11:11232369-11232725 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 254
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 45, 72

Conread position: 182-455
Cow position: chr11:60143218-60143491 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 195
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 48, 12

Conread position: 182-466
Cow position: chr11:64090011-64090286 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 48, 77

Conread position: 182-467
Cow position: chr11:80521034-80520768 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 7

Conread position: 183-466
Cow position: chr11:27932365-27932066 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 47, 10

Conread position: 183-531
Cow position: chr11:3833280-3833629 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 47, 11

Conread position: 183-544
Cow position: chr11:8428595-8428202 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 267
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 19, 8

Conread position: 184-435
Cow position: chr11:21438292-21438044 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 42, 130

Conread position: 184-537
Cow position: chr11:44642208-44642573 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 14

Conread position: 184-546
Cow position: chr11:35363565-35363202 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 270
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 46, 110

Conread position: 184-562
Cow position: chr11:62226070-62225687 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 256
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 167

Conread position: 186-472
Cow position: chr11:27765235-27764947 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 44, 175

Conread position: 187-462
Cow position: chr11:70273388-70273105 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 8, 250

Conread position: 187-466
Cow position: chr11:952349-952069 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 189
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 60

Conread position: 187-520
Cow position: chr11:32378266-32377917 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 20

Conread position: 187-531
Cow position: chr11:26256332-26256677 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 239
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 81, 11

Conread position: 187-533
Cow position: chr11:43430376-43430730 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 66

Conread position: 188-463
Cow position: chr11:49231953-49231677 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 194
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 42, 65

Conread position: 189-520
Cow position: chr11:68423140-68422810 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 223
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 265, 9

Conread position: 190-591
Cow position: chr11:51144791-51144375 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 191-415
Cow position: chr11:52983752-52983525 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 191-466
Cow position: chr11:47545208-47544928 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 59

Conread position: 192-371
Cow position: chr11:75965576-75965757 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 192-452
Cow position: chr11:48383596-48383341 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 38, 52

Conread position: 193-474
Cow position: chr11:16261950-16262240 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 206

Conread position: 195-466
Cow position: chr11:57724752-57725028 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 36, 148

Conread position: 195-546
Cow position: chr11:32595530-32595173 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 250
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 35, 58

Conread position: 198-534
Cow position: chr11:2092404-2092061 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 231
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 52

Conread position: 199-436
Cow position: chr11:41175880-41176122 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 31, 92

Conread position: 200-452
Cow position: chr11:51043865-51044119 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 7, 45

Conread position: 200-459
Cow position: chr11:36286763-36286506 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 53

Conread position: 200-533
Cow position: chr11:62880564-62880908 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 244
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 51

Conread position: 201-562
Cow position: chr11:33753843-33754211 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 260
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 29, 7

Conread position: 202-543
Cow position: chr11:42002881-42003247 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 259
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 5, 81

Conread position: 203-463
Cow position: chr11:61858838-61859096 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 176

Conread position: 204-462
Cow position: chr11:70745467-70745734 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 100

Conread position: 207-466
Cow position: chr11:3720314-3720052 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 23, 53

Conread position: 208-535
Cow position: chr11:71168530-71168861 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 164

Conread position: 209-437
Cow position: chr11:53512140-53511908 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 7, 31

Conread position: 210-460
Cow position: chr11:30764548-30764286 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 20, 201

Conread position: 213-421
Cow position: chr11:21427938-21428151 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 220-457
Cow position: chr11:20684524-20684770 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 220-466
Cow position: chr11:32750158-32749908 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 46

Conread position: 220-466
Cow position: chr11:36114201-36113958 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 158, 10

Conread position: 220-466
Cow position: chr11:61203213-61202963 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 174

Conread position: 220-538
Cow position: chr11:41811867-41812198 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 10, 101

Conread position: 220-539
Cow position: chr11:4436367-4436045 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 218
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 10, 39

Conread position: 220-543
Cow position: chr11:4323406-4323074 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 229
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 10, 39

Conread position: 220-552
Cow position: chr11:43524656-43524321 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 233
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 31

Conread position: 221-460
Cow position: chr11:13191281-13191026 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 132

Conread position: 222-466
Cow position: chr11:33349655-33349901 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 8, 37

Conread position: 224-452
Cow position: chr11:57170788-57171015 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 82, 200

Conread position: 224-537
Cow position: chr11:14649272-14649600 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 224
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 94, 79

Conread position: 225-447
Cow position: chr11:2811689-2811912 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 85, 143

Conread position: 225-537
Cow position: chr11:42232647-42232328 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 234
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 45, 26

Conread position: 226-444
Cow position: chr11:38670721-38670502 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 81, 31

Conread position: 226-458
Cow position: chr11:16910319-16910558 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 226-466
Cow position: chr11:3726328-3726086 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 46, 31

Conread position: 226-466
Cow position: chr11:3780378-3780624 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 73, 110

Conread position: 226-466
Cow position: chr11:18341001-18341238 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 87, 40

Conread position: 226-466
Cow position: chr11:45872271-45872518 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 25

Conread position: 226-470
Cow position: chr11:30120622-30120865 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 84, 32

Conread position: 226-510
Cow position: chr11:30597033-30596736 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 91, 0

Conread position: 226-530
Cow position: chr11:9088258-9088575 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 220

Conread position: 229-452
Cow position: chr11:48041996-48042228 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 229-466
Cow position: chr11:14094383-14094623 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 11, 18

Conread position: 229-531
Cow position: chr11:8339369-8339686 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 20, 42

Conread position: 229-538
Cow position: chr11:9837059-9837387 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 239
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 52, 253

Conread position: 229-538
Cow position: chr11:27386302-27386626 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 81, 314

Conread position: 230-460
Cow position: chr11:18591398-18591628 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 20

Conread position: 230-537
Cow position: chr11:21798965-21798664 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 165, 27

Conread position: 231-466
Cow position: chr11:6835568-6835329 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 37

Conread position: 231-545
Cow position: chr11:10076803-10076482 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 81, 206

Conread position: 236-443
Cow position: chr11:24585211-24585000 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 86, 76

Conread position: 238-541
Cow position: chr11:18388849-18389148 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 227, 26

Conread position: 239-467
Cow position: chr11:62739245-62739015 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 69, 21

Conread position: 240-524
Cow position: chr11:59155850-59156145 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 201
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 103

Conread position: 241-536
Cow position: chr11:17112603-17112913 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 25, 133

Conread position: 243-451
Cow position: chr11:7458259-7458474 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 243-540
Cow position: chr11:2309896-2309587 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 157

Conread position: 247-452
Cow position: chr11:32610017-32609814 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 67, 0

Conread position: 248-546
Cow position: chr11:37068298-37068597 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 89

Conread position: 249-535
Cow position: chr11:37347496-37347192 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 21, 283

Conread position: 253-413
Cow position: chr11:51626978-51626813 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 253-517
Cow position: chr11:57769350-57769620 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 180
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 13

Conread position: 254-462
Cow position: chr11:38194170-38193956 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 15, 0

Conread position: 255-538
Cow position: chr11:81174900-81174604 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 18, 57

Conread position: 256-441
Cow position: chr11:33468721-33468535 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 13, 178

Conread position: 256-455
Cow position: chr11:65843086-65843280 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 57, 26

Conread position: 256-466
Cow position: chr11:36672034-36672250 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 55, 68

Conread position: 256-470
Cow position: chr11:18243930-18244145 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 78

Conread position: 258-522
Cow position: chr11:83196505-83196227 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 55, 18

Conread position: 258-534
Cow position: chr11:53130821-53130526 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 56, 260

Conread position: 258-535
Cow position: chr11:59430153-59430425 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 12

Conread position: 263-463
Cow position: chr11:42792969-42793172 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 7, 0

Conread position: 265-521
Cow position: chr11:77208042-77207777 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 189, 5

Conread position: 266-528
Cow position: chr11:71455793-71455509 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 6, 29

Conread position: 268-413
Cow position: chr11:65435852-65435704 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 43, 28

Conread position: 268-461
Cow position: chr11:18210350-18210543 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 268-466
Cow position: chr11:62979488-62979278 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 164
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 268-467
Cow position: chr11:35668713-35668919 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 268-470
Cow position: chr11:2514596-2514796 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 61

Conread position: 268-536
Cow position: chr11:68570671-68570958 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 106, 44

Conread position: 268-538
Cow position: chr11:26483710-26483433 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 205
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 124, 182

Conread position: 269-459
Cow position: chr11:47639030-47639223 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 28

Conread position: 269-463
Cow position: chr11:4412025-4412214 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 269-466
Cow position: chr11:1485362-1485560 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 18, 56

Conread position: 269-466
Cow position: chr11:16251247-16251448 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 164

Conread position: 270-463
Cow position: chr11:37100361-37100556 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 122, 172

Conread position: 270-466
Cow position: chr11:9463832-9463629 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 270-466
Cow position: chr11:47165145-47165337 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 70

Conread position: 270-466
Cow position: chr11:62045392-62045199 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 111

Conread position: 270-466
Cow position: chr11:62808656-62808848 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 125, 43

Conread position: 270-466
Cow position: chr11:62965552-62965753 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 44, 164

Conread position: 270-466
Cow position: chr11:63516823-63516624 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 270-496
Cow position: chr11:36301082-36301311 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 122, 0

Conread position: 270-521
Cow position: chr11:8105781-8105511 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 39, 74

Conread position: 270-524
Cow position: chr11:62016285-62016544 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 171, 63

Conread position: 270-536
Cow position: chr11:41577024-41577291 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 178, 42

Conread position: 270-537
Cow position: chr11:41983461-41983732 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 156, 27

Conread position: 270-538
Cow position: chr11:47586354-47586634 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 35, 73

Conread position: 270-539
Cow position: chr11:30110958-30110682 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 45, 129

Conread position: 270-546
Cow position: chr11:41239273-41239565 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 202
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 48, 275

Conread position: 271-453
Cow position: chr11:18373070-18372889 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 28, 58

Conread position: 271-521
Cow position: chr11:81614645-81614903 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 42, 73

Conread position: 271-533
Cow position: chr11:85764930-85764669 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 139, 44

Conread position: 274-545
Cow position: chr11:77241362-77241086 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 39, 139

Conread position: 274-546
Cow position: chr11:81605621-81605344 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 43, 260

Conread position: 275-447
Cow position: chr11:17574342-17574509 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 81

Conread position: 276-461
Cow position: chr11:40860724-40860906 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 117, 37

Conread position: 276-538
Cow position: chr11:65857850-65857571 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 269

Conread position: 277-555
Cow position: chr11:35149150-35148864 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 114, 206

Conread position: 278-467
Cow position: chr11:71846357-71846549 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 6, 0

Conread position: 280-460
Cow position: chr11:5526585-5526768 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 280-466
Cow position: chr11:59371000-59370815 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 125

Conread position: 280-467
Cow position: chr11:25320042-25319850 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 104

Conread position: 280-543
Cow position: chr11:49106043-49105768 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 125

Conread position: 281-522
Cow position: chr11:75748419-75748163 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 25, 98

Conread position: 282-520
Cow position: chr11:48901098-48901348 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 32, 97

Conread position: 284-547
Cow position: chr11:43914197-43913928 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 32, 218

Conread position: 299-447
Cow position: chr11:36058767-36058621 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 301-466
Cow position: chr11:34121157-34120998 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 304-470
Cow position: chr11:21830393-21830556 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 122, 0

Conread position: 305-546
Cow position: chr11:35276257-35276002 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 164, 8

Conread position: 309-439
Cow position: chr11:18399372-18399507 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 92, 118

Conread position: 309-471
Cow position: chr11:21819490-21819649 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 133

Conread position: 312-467
Cow position: chr11:84924143-84924299 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 128
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 83, 25

Conread position: 313-444
Cow position: chr11:78543886-78543754 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 313-555
Cow position: chr11:57111356-57111615 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 95, 85

Conread position: 313-565
Cow position: chr11:58614614-58614345 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 314-462
Cow position: chr11:53719893-53719749 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 314-462
Cow position: chr11:74929733-74929584 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 315-434
Cow position: chr11:29266490-29266370 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 315-531
Cow position: chr11:67931542-67931776 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 315-571
Cow position: chr11:34121712-34121433 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 255

Conread position: 317-466
Cow position: chr11:25337023-25336875 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 319-467
Cow position: chr11:73478564-73478420 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 123, 0

Conread position: 320-467
Cow position: chr11:65693894-65694038 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 321-458
Cow position: chr11:875653-875787 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 321-467
Cow position: chr11:877042-876899 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 53, 75

Conread position: 323-466
Cow position: chr11:84890809-84890952 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 123
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 323-591
Cow position: chr11:25165383-25165099 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 210
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 159, 137

Conread position: 324-467
Cow position: chr11:70399800-70399658 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 325-535
Cow position: chr11:56796803-56797024 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 49, 74

Conread position: 325-538
Cow position: chr11:37752445-37752647 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 325-538
Cow position: chr11:40467179-40467410 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 74, 221

Conread position: 327-536
Cow position: chr11:2788320-2788093 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 328-452
Cow position: chr11:31417367-31417244 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 328-466
Cow position: chr11:10686951-10687087 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 334-524
Cow position: chr11:48232663-48232468 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 125

Conread position: 338-463
Cow position: chr11:27722289-27722165 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 338-554
Cow position: chr11:79019597-79019821 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 122, 218

Conread position: 345-466
Cow position: chr11:33293866-33293991 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 362-521
Cow position: chr11:85384553-85384396 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 101, 0

Show alignments to all cow chromosomes.