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Cow genome map

           
Conread name:
           
rpldo0136_h2.y1
        

               
Conread position:
               
19-569
               

               
Cow position:
               
chr20:25823566-25823027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
69, 34
               

               
Conread position:
               
64-400
               

               
Cow position:
               
chr20:5078897-5078548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
51, 12
               

               
Conread position:
               
64-439
               

               
Cow position:
               
chr20:28249454-28249068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
69-229
               

               
Cow position:
               
chr20:32174756-32174605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
70-377
               

               
Cow position:
               
chr20:37919110-37919419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
103, 22
               

               
Conread position:
               
72-412
               

               
Cow position:
               
chr20:36741728-36741388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
72-414
               

               
Cow position:
               
chr20:21428413-21428071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
158, 19
               

               
Conread position:
               
72-538
               

               
Cow position:
               
chr20:10236082-10235627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
76-304
               

               
Cow position:
               
chr20:7416908-7417145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
76-363
               

               
Cow position:
               
chr20:40158172-40157862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
76-452
               

               
Cow position:
               
chr20:7658962-7659343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 164
               

               
Conread position:
               
76-466
               

               
Cow position:
               
chr20:14433156-14433566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
27, 132
               

               
Conread position:
               
77-452
               

               
Cow position:
               
chr20:2298537-2298905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
86, 14
               

               
Conread position:
               
77-466
               

               
Cow position:
               
chr20:13995062-13994671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
77-536
               

               
Cow position:
               
chr20:13493989-13493513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
26, 120
               

               
Conread position:
               
78-349
               

               
Cow position:
               
chr20:6372314-6372587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 71
               

               
Conread position:
               
78-466
               

               
Cow position:
               
chr20:16935056-16935441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
78-538
               

               
Cow position:
               
chr20:19328662-19328175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
14, 238
               

               
Conread position:
               
79-391
               

               
Cow position:
               
chr20:11548469-11548788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
79-466
               

               
Cow position:
               
chr20:26996782-26996392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
79-523
               

               
Cow position:
               
chr20:34251407-34251890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
14, 34
               

               
Conread position:
               
79-543
               

               
Cow position:
               
chr20:5950379-5950863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 226
               

               
Conread position:
               
79-571
               

               
Cow position:
               
chr20:20359553-20360033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
153, 36
               

               
Conread position:
               
80-409
               

               
Cow position:
               
chr20:5645037-5644702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
80-433
               

               
Cow position:
               
chr20:23540913-23541266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
80-463
               

               
Cow position:
               
chr20:5814826-5814435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
80-531
               

               
Cow position:
               
chr20:12581708-12582167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
93, 29
               

               
Conread position:
               
80-538
               

               
Cow position:
               
chr20:4944994-4945470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 38
               

               
Conread position:
               
80-545
               

               
Cow position:
               
chr20:11741068-11741537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 33
               

               
Conread position:
               
81-262
               

               
Cow position:
               
chr20:19746219-19746035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
81-280
               

               
Cow position:
               
chr20:27315233-27315026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
81-377
               

               
Cow position:
               
chr20:9376709-9376416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
89, 32
               

               
Conread position:
               
81-377
               

               
Cow position:
               
chr20:11359392-11359684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
70, 41
               

               
Conread position:
               
81-390
               

               
Cow position:
               
chr20:6962081-6962375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 87
               

               
Conread position:
               
81-391
               

               
Cow position:
               
chr20:38090163-38089845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
81-420
               

               
Cow position:
               
chr20:22265016-22265341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
244, 24
               

               
Conread position:
               
81-420
               

               
Cow position:
               
chr20:24712088-24711739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
10, 51
               

               
Conread position:
               
81-442
               

               
Cow position:
               
chr20:23235275-23234917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
16, 73
               

               
Conread position:
               
81-450
               

               
Cow position:
               
chr20:34097688-34098084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
81-463
               

               
Cow position:
               
chr20:27407648-27408013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
67, 51
               

               
Conread position:
               
81-463
               

               
Cow position:
               
chr20:35742031-35741618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 130
               

               
Conread position:
               
81-466
               

               
Cow position:
               
chr20:13829521-13829126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
81-466
               

               
Cow position:
               
chr20:14980260-14980653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 50
               

               
Conread position:
               
81-466
               

               
Cow position:
               
chr20:15312911-15312521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
81-466
               

               
Cow position:
               
chr20:23846409-23846810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
81-466
               

               
Cow position:
               
chr20:30710396-30710788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 38
               

               
Conread position:
               
81-468
               

               
Cow position:
               
chr20:28982956-28982557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
81-483
               

               
Cow position:
               
chr20:21929150-21928746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 98
               

               
Conread position:
               
81-523
               

               
Cow position:
               
chr20:20984244-20983795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 22
               

               
Conread position:
               
81-529
               

               
Cow position:
               
chr20:40257197-40256752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
241, 38
               

               
Conread position:
               
81-531
               

               
Cow position:
               
chr20:38818236-38817791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
149, 29
               

               
Conread position:
               
81-536
               

               
Cow position:
               
chr20:13269861-13269400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
37, 53
               

               
Conread position:
               
81-537
               

               
Cow position:
               
chr20:22235546-22235090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
254, 29
               

               
Conread position:
               
81-543
               

               
Cow position:
               
chr20:8702683-8703137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
158, 35
               

               
Conread position:
               
82-424
               

               
Cow position:
               
chr20:18379623-18379282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
82-466
               

               
Cow position:
               
chr20:21345685-21345268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
82-466
               

               
Cow position:
               
chr20:41704420-41704016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
9, 177
               

               
Conread position:
               
82-471
               

               
Cow position:
               
chr20:4755577-4755969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 244
               

               
Conread position:
               
82-520
               

               
Cow position:
               
chr20:14807129-14806677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
82-537
               

               
Cow position:
               
chr20:3599156-3599614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 37
               

               
Conread position:
               
83-395
               

               
Cow position:
               
chr20:16941027-16941362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
83-446
               

               
Cow position:
               
chr20:28594537-28594162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
83-463
               

               
Cow position:
               
chr20:34221737-34221341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
83-466
               

               
Cow position:
               
chr20:8578500-8578106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
82, 30
               

               
Conread position:
               
83-474
               

               
Cow position:
               
chr20:35146270-35145862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 114
               

               
Conread position:
               
83-541
               

               
Cow position:
               
chr20:15548647-15549127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
45, 60
               

               
Conread position:
               
84-469
               

               
Cow position:
               
chr20:14917525-14917153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
84-536
               

               
Cow position:
               
chr20:21019802-21019340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
47, 34
               

               
Conread position:
               
84-545
               

               
Cow position:
               
chr20:31739973-31740448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 127
               

               
Conread position:
               
85-463
               

               
Cow position:
               
chr20:23792843-23792472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
145, 26
               

               
Conread position:
               
85-466
               

               
Cow position:
               
chr20:13876466-13876846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
85-467
               

               
Cow position:
               
chr20:38551620-38551232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 115
               

               
Conread position:
               
85-534
               

               
Cow position:
               
chr20:398059-398515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
85-536
               

               
Cow position:
               
chr20:10469303-10468846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
27, 148
               

               
Conread position:
               
85-545
               

               
Cow position:
               
chr20:29845298-29844821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
86-255
               

               
Cow position:
               
chr20:33781112-33780941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
86-466
               

               
Cow position:
               
chr20:5024713-5025081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
30, 95
               

               
Conread position:
               
86-538
               

               
Cow position:
               
chr20:14620053-14620497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 174
               

               
Conread position:
               
86-585
               

               
Cow position:
               
chr20:8556028-8556539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 32
               

               
Conread position:
               
88-333
               

               
Cow position:
               
chr20:1824381-1824641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
88-399
               

               
Cow position:
               
chr20:11008425-11008096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 269
               

               
Conread position:
               
88-507
               

               
Cow position:
               
chr20:20739045-20739485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
91-421
               

               
Cow position:
               
chr20:7737986-7738323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
25, 228
               

               
Conread position:
               
91-466
               

               
Cow position:
               
chr20:29755026-29754648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
25, 109
               

               
Conread position:
               
91-467
               

               
Cow position:
               
chr20:14880034-14879648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 319
               

               
Conread position:
               
96-534
               

               
Cow position:
               
chr20:40303639-40304073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
20, 186
               

               
Conread position:
               
97-293
               

               
Cow position:
               
chr20:22923156-22922952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
19, 191
               

               
Conread position:
               
97-381
               

               
Cow position:
               
chr20:39016628-39016934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
19, 12
               

               
Conread position:
               
97-521
               

               
Cow position:
               
chr20:38578529-38578964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
98-452
               

               
Cow position:
               
chr20:40782188-40781841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
38, 46
               

               
Conread position:
               
99-399
               

               
Cow position:
               
chr20:28818696-28819005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 128
               

               
Conread position:
               
100-261
               

               
Cow position:
               
chr20:11499242-11499073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
16, 95
               

               
Conread position:
               
100-537
               

               
Cow position:
               
chr20:14572138-14572580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
101-428
               

               
Cow position:
               
chr20:7624021-7624347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
102-273
               

               
Cow position:
               
chr20:13617448-13617282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
14, 65
               

               
Conread position:
               
102-363
               

               
Cow position:
               
chr20:4781825-4781571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
15, 71
               

               
Conread position:
               
102-393
               

               
Cow position:
               
chr20:5576425-5576149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
102-395
               

               
Cow position:
               
chr20:23506243-23506540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
102-399
               

               
Cow position:
               
chr20:35192996-35192704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
102-412
               

               
Cow position:
               
chr20:38868858-38868557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
102-441
               

               
Cow position:
               
chr20:11045911-11045556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 103
               

               
Conread position:
               
102-451
               

               
Cow position:
               
chr20:7438620-7438979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
14, 321
               

               
Conread position:
               
102-455
               

               
Cow position:
               
chr20:6240283-6240652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 182
               

               
Conread position:
               
102-462
               

               
Cow position:
               
chr20:33434922-33435301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
102-463
               

               
Cow position:
               
chr20:25009396-25009778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 197
               

               
Conread position:
               
102-533
               

               
Cow position:
               
chr20:7441905-7442346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 20
               

               
Conread position:
               
102-536
               

               
Cow position:
               
chr20:6903531-6903104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
102-541
               

               
Cow position:
               
chr20:33532527-33532081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
102-568
               

               
Cow position:
               
chr20:15568726-15569196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
103-311
               

               
Cow position:
               
chr20:11101638-11101429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
13, 102
               

               
Conread position:
               
103-374
               

               
Cow position:
               
chr20:20898353-20898640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
13, 247
               

               
Conread position:
               
103-467
               

               
Cow position:
               
chr20:25686130-25686491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 60
               

               
Conread position:
               
103-545
               

               
Cow position:
               
chr20:24070038-24069584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
70, 19
               

               
Conread position:
               
106-524
               

               
Cow position:
               
chr20:13752446-13752028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
124, 85
               

               
Conread position:
               
109-536
               

               
Cow position:
               
chr20:7550464-7550030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
7, 105
               

               
Conread position:
               
113-460
               

               
Cow position:
               
chr20:8429963-8429609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
114-466
               

               
Cow position:
               
chr20:17251942-17251569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 167
               

               
Conread position:
               
115-302
               

               
Cow position:
               
chr20:28899306-28899118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
115, 51
               

               
Conread position:
               
115-348
               

               
Cow position:
               
chr20:12126079-12126328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
115-389
               

               
Cow position:
               
chr20:354676-354961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
47, 163
               

               
Conread position:
               
115-389
               

               
Cow position:
               
chr20:30119370-30119638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
114, 11
               

               
Conread position:
               
115-431
               

               
Cow position:
               
chr20:23103414-23103112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
164, 50
               

               
Conread position:
               
115-451
               

               
Cow position:
               
chr20:34108311-34107988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 51
               

               
Conread position:
               
115-452
               

               
Cow position:
               
chr20:3141797-3141455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
48, 11
               

               
Conread position:
               
115-453
               

               
Cow position:
               
chr20:311525-311214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
115-463
               

               
Cow position:
               
chr20:4334316-4334655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 221
               

               
Conread position:
               
115-463
               

               
Cow position:
               
chr20:36779497-36779866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 332
               

               
Conread position:
               
115-463
               

               
Cow position:
               
chr20:41089570-41089929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
50, 92
               

               
Conread position:
               
115-465
               

               
Cow position:
               
chr20:31081243-31080906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 47
               

               
Conread position:
               
115-466
               

               
Cow position:
               
chr20:6603253-6602903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
115-466
               

               
Cow position:
               
chr20:10200571-10200209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
57, 266
               

               
Conread position:
               
115-466
               

               
Cow position:
               
chr20:12420397-12420759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 277
               

               
Conread position:
               
115-467
               

               
Cow position:
               
chr20:4204489-4204153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
198, 46
               

               
Conread position:
               
115-467
               

               
Cow position:
               
chr20:14540549-14540213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
102, 46
               

               
Conread position:
               
115-467
               

               
Cow position:
               
chr20:21372518-21372177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
115, 14
               

               
Conread position:
               
115-474
               

               
Cow position:
               
chr20:40177466-40177104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 85
               

               
Conread position:
               
115-503
               

               
Cow position:
               
chr20:20967541-20967148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
22, 240
               

               
Conread position:
               
115-517
               

               
Cow position:
               
chr20:25161909-25162315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
115-518
               

               
Cow position:
               
chr20:39417680-39418101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
56, 147
               

               
Conread position:
               
115-520
               

               
Cow position:
               
chr20:13023280-13023687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
58, 82
               

               
Conread position:
               
115-521
               

               
Cow position:
               
chr20:30817743-30817327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
74, 112
               

               
Conread position:
               
115-522
               

               
Cow position:
               
chr20:6424176-6423753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 48
               

               
Conread position:
               
115-524
               

               
Cow position:
               
chr20:28296520-28296077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
49, 201
               

               
Conread position:
               
115-531
               

               
Cow position:
               
chr20:40422876-40423310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
50, 239
               

               
Conread position:
               
115-538
               

               
Cow position:
               
chr20:34001195-34001621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 50
               

               
Conread position:
               
115-546
               

               
Cow position:
               
chr20:6054285-6054744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
115-569
               

               
Cow position:
               
chr20:14759452-14759921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 200
               

               
Conread position:
               
115-591
               

               
Cow position:
               
chr20:40511550-40512030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 51
               

               
Conread position:
               
116-452
               

               
Cow position:
               
chr20:33067138-33067502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
116-457
               

               
Cow position:
               
chr20:38847006-38847368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 94
               

               
Conread position:
               
116-547
               

               
Cow position:
               
chr20:34596882-34597344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
117-385
               

               
Cow position:
               
chr20:11135532-11135821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 272
               

               
Conread position:
               
117-435
               

               
Cow position:
               
chr20:16492275-16491961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
99, 42
               

               
Conread position:
               
117-538
               

               
Cow position:
               
chr20:9433802-9433377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 272
               

               
Conread position:
               
118-434
               

               
Cow position:
               
chr20:10188494-10188165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
55, 87
               

               
Conread position:
               
118-452
               

               
Cow position:
               
chr20:3739790-3740128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
89, 229
               

               
Conread position:
               
118-466
               

               
Cow position:
               
chr20:36011007-36010651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 8
               

               
Conread position:
               
119-463
               

               
Cow position:
               
chr20:10818034-10818360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
111, 14
               

               
Conread position:
               
121-539
               

               
Cow position:
               
chr20:4206176-4205737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 69
               

               
Conread position:
               
122-249
               

               
Cow position:
               
chr20:32555498-32555367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
123-377
               

               
Cow position:
               
chr20:10772414-10772151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
125-534
               

               
Cow position:
               
chr20:13967070-13967481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 55
               

               
Conread position:
               
132-439
               

               
Cow position:
               
chr20:11188609-11188920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 134
               

               
Conread position:
               
132-555
               

               
Cow position:
               
chr20:12205532-12205955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 68
               

               
Conread position:
               
136-466
               

               
Cow position:
               
chr20:42197503-42197189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
94, 30
               

               
Conread position:
               
143-462
               

               
Cow position:
               
chr20:13025425-13025744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
87, 208
               

               
Conread position:
               
151-533
               

               
Cow position:
               
chr20:14735851-14735455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
152-545
               

               
Cow position:
               
chr20:17846134-17845726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
78, 35
               

               
Conread position:
               
153-441
               

               
Cow position:
               
chr20:32988657-32988955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
153-451
               

               
Cow position:
               
chr20:6890883-6890589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
62, 41
               

               
Conread position:
               
153-466
               

               
Cow position:
               
chr20:3320969-3321276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
77, 100
               

               
Conread position:
               
153-530
               

               
Cow position:
               
chr20:19363190-19363581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
153-543
               

               
Cow position:
               
chr20:4621180-4621572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
126, 41
               

               
Conread position:
               
155-467
               

               
Cow position:
               
chr20:19266331-19266018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
10, 69
               

               
Conread position:
               
158-447
               

               
Cow position:
               
chr20:40692232-40691934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
158-452
               

               
Cow position:
               
chr20:28067252-28067554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 42
               

               
Conread position:
               
161-392
               

               
Cow position:
               
chr20:20056319-20056552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 134
               

               
Conread position:
               
161-452
               

               
Cow position:
               
chr20:22485026-22484732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 98
               

               
Conread position:
               
161-462
               

               
Cow position:
               
chr20:19751474-19751175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 251
               

               
Conread position:
               
161-466
               

               
Cow position:
               
chr20:11038741-11038465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 5
               

               
Conread position:
               
161-530
               

               
Cow position:
               
chr20:39728618-39728230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
161-545
               

               
Cow position:
               
chr20:5827107-5826703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 85
               

               
Conread position:
               
161-571
               

               
Cow position:
               
chr20:34777347-34776925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 209
               

               
Conread position:
               
162-413
               

               
Cow position:
               
chr20:41883896-41883647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 121
               

               
Conread position:
               
165-449
               

               
Cow position:
               
chr20:35408014-35407738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
102, 81
               

               
Conread position:
               
166-419
               

               
Cow position:
               
chr20:15822709-15822457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
166-463
               

               
Cow position:
               
chr20:20099437-20099732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
8, 132
               

               
Conread position:
               
166-466
               

               
Cow position:
               
chr20:23870657-23870954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 109
               

               
Conread position:
               
166-473
               

               
Cow position:
               
chr20:9266945-9267246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
166-538
               

               
Cow position:
               
chr20:21714930-21714524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
166-547
               

               
Cow position:
               
chr20:18392109-18392476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
60, 100
               

               
Conread position:
               
166-566
               

               
Cow position:
               
chr20:38768301-38768705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 89
               

               
Conread position:
               
167-452
               

               
Cow position:
               
chr20:33144392-33144683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
167-463
               

               
Cow position:
               
chr20:36207975-36207667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
61, 117
               

               
Conread position:
               
167-466
               

               
Cow position:
               
chr20:11481974-11482277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 36
               

               
Conread position:
               
167-545
               

               
Cow position:
               
chr20:6096332-6096716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 265
               

               
Conread position:
               
167-571
               

               
Cow position:
               
chr20:29805498-29805914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
47, 217
               

               
Conread position:
               
168-443
               

               
Cow position:
               
chr20:24834249-24833975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
47, 78
               

               
Conread position:
               
171-394
               

               
Cow position:
               
chr20:16548121-16548347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 115
               

               
Conread position:
               
171-453
               

               
Cow position:
               
chr20:1576254-1575970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
59, 195
               

               
Conread position:
               
171-466
               

               
Cow position:
               
chr20:18320637-18320933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
59, 82
               

               
Conread position:
               
171-538
               

               
Cow position:
               
chr20:26077239-26076860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
59, 88
               

               
Conread position:
               
172-358
               

               
Cow position:
               
chr20:7709625-7709819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 81
               

               
Conread position:
               
172-396
               

               
Cow position:
               
chr20:24902137-24902371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 99
               

               
Conread position:
               
172-444
               

               
Cow position:
               
chr20:41627185-41627467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
172-450
               

               
Cow position:
               
chr20:31323943-31323672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 94
               

               
Conread position:
               
172-463
               

               
Cow position:
               
chr20:42458700-42458988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
58, 143
               

               
Conread position:
               
172-466
               

               
Cow position:
               
chr20:5636637-5636342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 157
               

               
Conread position:
               
172-524
               

               
Cow position:
               
chr20:9537288-9536921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 74
               

               
Conread position:
               
172-532
               

               
Cow position:
               
chr20:42469915-42469545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
58, 82
               

               
Conread position:
               
172-536
               

               
Cow position:
               
chr20:12995850-12996234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
55, 231
               

               
Conread position:
               
172-585
               

               
Cow position:
               
chr20:14679773-14679346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
22, 30
               

               
Conread position:
               
173-449
               

               
Cow position:
               
chr20:36633967-36633692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
51, 72
               

               
Conread position:
               
173-462
               

               
Cow position:
               
chr20:15565674-15565965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 0
               

               
Conread position:
               
174-412
               

               
Cow position:
               
chr20:26077514-26077745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
56, 141
               

               
Conread position:
               
179-436
               

               
Cow position:
               
chr20:39266809-39267071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
51, 80
               

               
Conread position:
               
179-439
               

               
Cow position:
               
chr20:33438831-33439087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 157
               

               
Conread position:
               
179-452
               

               
Cow position:
               
chr20:35906901-35907175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
47, 90
               

               
Conread position:
               
179-456
               

               
Cow position:
               
chr20:36040624-36040341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 163
               

               
Conread position:
               
179-462
               

               
Cow position:
               
chr20:15235901-15235631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
51, 67
               

               
Conread position:
               
179-466
               

               
Cow position:
               
chr20:23064686-23064967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
51, 69
               

               
Conread position:
               
180-453
               

               
Cow position:
               
chr20:21761921-21761647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
48, 11
               

               
Conread position:
               
180-461
               

               
Cow position:
               
chr20:40450171-40449873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
13, 149
               

               
Conread position:
               
180-467
               

               
Cow position:
               
chr20:13821431-13821725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
31, 40
               

               
Conread position:
               
180-467
               

               
Cow position:
               
chr20:38858275-38858547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 33
               

               
Conread position:
               
182-467
               

               
Cow position:
               
chr20:35797755-35797466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
183-377
               

               
Cow position:
               
chr20:39962718-39962523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
183-402
               

               
Cow position:
               
chr20:33976625-33976405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 8
               

               
Conread position:
               
190-546
               

               
Cow position:
               
chr20:28955563-28955908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
40, 56
               

               
Conread position:
               
191-462
               

               
Cow position:
               
chr20:11542150-11542417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 113
               

               
Conread position:
               
195-399
               

               
Cow position:
               
chr20:17765198-17765404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
195-571
               

               
Cow position:
               
chr20:34918404-34918020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
15, 9
               

               
Conread position:
               
196-438
               

               
Cow position:
               
chr20:12430667-12430908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 44
               

               
Conread position:
               
197-437
               

               
Cow position:
               
chr20:19339750-19339986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
198-515
               

               
Cow position:
               
chr20:24000666-24000981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
25, 234
               

               
Conread position:
               
198-531
               

               
Cow position:
               
chr20:20471913-20471570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
199-444
               

               
Cow position:
               
chr20:7622935-7623178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
67, 204
               

               
Conread position:
               
199-479
               

               
Cow position:
               
chr20:16585502-16585787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
203-439
               

               
Cow position:
               
chr20:34085193-34084954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
28, 219
               

               
Conread position:
               
203-536
               

               
Cow position:
               
chr20:24398521-24398857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
33, 51
               

               
Conread position:
               
205-466
               

               
Cow position:
               
chr20:37165833-37165588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
210-541
               

               
Cow position:
               
chr20:5998555-5998894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
103, 162
               

               
Conread position:
               
213-423
               

               
Cow position:
               
chr20:28804682-28804464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 6
               

               
Conread position:
               
215-536
               

               
Cow position:
               
chr20:22313049-22313385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
98, 131
               

               
Conread position:
               
217-466
               

               
Cow position:
               
chr20:22704404-22704150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 15
               

               
Conread position:
               
217-569
               

               
Cow position:
               
chr20:35009626-35009996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 313
               

               
Conread position:
               
218-569
               

               
Cow position:
               
chr20:39019805-39019439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
9, 191
               

               
Conread position:
               
220-423
               

               
Cow position:
               
chr20:15118384-15118177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
10, 97
               

               
Conread position:
               
220-431
               

               
Cow position:
               
chr20:19616600-19616379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
220-460
               

               
Cow position:
               
chr20:9014239-9014480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
10, 49
               

               
Conread position:
               
220-466
               

               
Cow position:
               
chr20:7211147-7210898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
225-369
               

               
Cow position:
               
chr20:11514790-11514923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
225-538
               

               
Cow position:
               
chr20:9473511-9473839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
226-460
               

               
Cow position:
               
chr20:11176147-11176379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
98, 151
               

               
Conread position:
               
228-437
               

               
Cow position:
               
chr20:34901670-34901459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
228-538
               

               
Cow position:
               
chr20:35958746-35958424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
83, 301
               

               
Conread position:
               
229-460
               

               
Cow position:
               
chr20:10884260-10884498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
229-461
               

               
Cow position:
               
chr20:13795078-13794849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
213, 37
               

               
Conread position:
               
230-421
               

               
Cow position:
               
chr20:21698490-21698290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
234-444
               

               
Cow position:
               
chr20:30992234-30992019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 94
               

               
Conread position:
               
241-474
               

               
Cow position:
               
chr20:19146962-19146723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
244-466
               

               
Cow position:
               
chr20:3331203-3331432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 7
               

               
Conread position:
               
252-535
               

               
Cow position:
               
chr20:11923171-11923463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
253-463
               

               
Cow position:
               
chr20:39247986-39247774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 147
               

               
Conread position:
               
253-538
               

               
Cow position:
               
chr20:22445574-22445861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
201, 39
               

               
Conread position:
               
256-463
               

               
Cow position:
               
chr20:28832041-28831829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
257-535
               

               
Cow position:
               
chr20:18100478-18100195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
12, 52
               

               
Conread position:
               
257-538
               

               
Cow position:
               
chr20:18185636-18185354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 59
               

               
Conread position:
               
258-449
               

               
Cow position:
               
chr20:27003656-27003854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 173
               

               
Conread position:
               
258-531
               

               
Cow position:
               
chr20:5104382-5104654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
133, 46
               

               
Conread position:
               
258-543
               

               
Cow position:
               
chr20:17904227-17903925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
59, 286
               

               
Conread position:
               
261-539
               

               
Cow position:
               
chr20:7132420-7132122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
267-463
               

               
Cow position:
               
chr20:23936345-23936552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
268-399
               

               
Cow position:
               
chr20:37357666-37357532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
268-443
               

               
Cow position:
               
chr20:18500265-18500096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
268-463
               

               
Cow position:
               
chr20:34240596-34240390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 26
               

               
Conread position:
               
268-466
               

               
Cow position:
               
chr20:21016542-21016338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
92, 39
               

               
Conread position:
               
268-520
               

               
Cow position:
               
chr20:9379464-9379200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
127, 50
               

               
Conread position:
               
268-535
               

               
Cow position:
               
chr20:31261782-31261511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
269-466
               

               
Cow position:
               
chr20:15760892-15761086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
269-543
               

               
Cow position:
               
chr20:20312690-20312968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 262
               

               
Conread position:
               
270-460
               

               
Cow position:
               
chr20:3035162-3034961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
270-463
               

               
Cow position:
               
chr20:32068795-32068992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
270-466
               

               
Cow position:
               
chr20:282869-283067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
270-466
               

               
Cow position:
               
chr20:37272771-37272574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
39, 162
               

               
Conread position:
               
270-466
               

               
Cow position:
               
chr20:41403633-41403431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
270-536
               

               
Cow position:
               
chr20:24002372-24002101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
42, 101
               

               
Conread position:
               
270-538
               

               
Cow position:
               
chr20:5078254-5077971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
109, 248
               

               
Conread position:
               
271-466
               

               
Cow position:
               
chr20:26469009-26469203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
272-537
               

               
Cow position:
               
chr20:29632945-29633217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 90
               

               
Conread position:
               
274-460
               

               
Cow position:
               
chr20:15069192-15069012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
41, 103
               

               
Conread position:
               
275-521
               

               
Cow position:
               
chr20:6848682-6848412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 94
               

               
Conread position:
               
276-536
               

               
Cow position:
               
chr20:17733731-17733998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
14, 18
               

               
Conread position:
               
277-466
               

               
Cow position:
               
chr20:9988629-9988449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
105, 55
               

               
Conread position:
               
277-466
               

               
Cow position:
               
chr20:27314719-27314542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
277-524
               

               
Cow position:
               
chr20:3781374-3781640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
277-546
               

               
Cow position:
               
chr20:27340112-27339831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
283-462
               

               
Cow position:
               
chr20:24392022-24391846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 6
               

               
Conread position:
               
285-456
               

               
Cow position:
               
chr20:9701527-9701709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
289-462
               

               
Cow position:
               
chr20:37200400-37200218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
292-471
               

               
Cow position:
               
chr20:41309574-41309392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
19, 113
               

               
Conread position:
               
293-460
               

               
Cow position:
               
chr20:26680157-26679990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
107, 149
               

               
Conread position:
               
296-463
               

               
Cow position:
               
chr20:19410331-19410499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
19, 121
               

               
Conread position:
               
299-462
               

               
Cow position:
               
chr20:8020926-8020760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
299-466
               

               
Cow position:
               
chr20:11340773-11340943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
301-545
               

               
Cow position:
               
chr20:21325141-21324892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
6, 70
               

               
Conread position:
               
304-524
               

               
Cow position:
               
chr20:38935216-38935425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
97, 33
               

               
Conread position:
               
304-527
               

               
Cow position:
               
chr20:15576866-15577107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
304-538
               

               
Cow position:
               
chr20:6045410-6045623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
309-524
               

               
Cow position:
               
chr20:12334391-12334169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
309-536
               

               
Cow position:
               
chr20:18399777-18399536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
60, 6
               

               
Conread position:
               
310-466
               

               
Cow position:
               
chr20:33177204-33177044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
65, 120
               

               
Conread position:
               
311-461
               

               
Cow position:
               
chr20:22722037-22721887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 138
               

               
Conread position:
               
312-534
               

               
Cow position:
               
chr20:33169860-33170099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
313-444
               

               
Cow position:
               
chr20:361307-361441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
313-463
               

               
Cow position:
               
chr20:11355230-11355078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
5, 100
               

               
Conread position:
               
313-543
               

               
Cow position:
               
chr20:23679136-23679377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 115
               

               
Conread position:
               
314-534
               

               
Cow position:
               
chr20:12048404-12048183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
316-552
               

               
Cow position:
               
chr20:14831606-14831854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
319-463
               

               
Cow position:
               
chr20:18837151-18837296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
319-466
               

               
Cow position:
               
chr20:3569061-3569202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
320-467
               

               
Cow position:
               
chr20:27977703-27977849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 52
               

               
Conread position:
               
322-541
               

               
Cow position:
               
chr20:17363684-17363916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
52, 217
               

               
Conread position:
               
324-458
               

               
Cow position:
               
chr20:4892819-4892956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
324-466
               

               
Cow position:
               
chr20:7806557-7806700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
325-534
               

               
Cow position:
               
chr20:15582038-15582260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
129, 64
               

               
Conread position:
               
326-466
               

               
Cow position:
               
chr20:35760668-35760533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
354-522
               

               
Cow position:
               
chr20:9730056-9729890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 137
               
Show alignments to all cow chromosomes.