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Cow genome map

           
Conread name:
           
rpldo0136_h2.y1
        

               
Conread position:
               
45-536
               

               
Cow position:
               
chr22:23249487-23249985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
9, 136
               

               
Conread position:
               
55-466
               

               
Cow position:
               
chr22:30572942-30573345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 108
               

               
Conread position:
               
58-378
               

               
Cow position:
               
chr22:2408889-2409220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 213
               

               
Conread position:
               
61-295
               

               
Cow position:
               
chr22:6359963-6360199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
63-536
               

               
Cow position:
               
chr22:12681572-12682063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
58, 8
               

               
Conread position:
               
65-568
               

               
Cow position:
               
chr22:29642336-29641808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
55, 30
               

               
Conread position:
               
66-460
               

               
Cow position:
               
chr22:11601263-11600856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
18, 200
               

               
Conread position:
               
67-466
               

               
Cow position:
               
chr22:10162181-10161777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
68-466
               

               
Cow position:
               
chr22:28371154-28370762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
48, 25
               

               
Conread position:
               
69-355
               

               
Cow position:
               
chr22:7832138-7832423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
69-425
               

               
Cow position:
               
chr22:24916043-24915690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
157, 58
               

               
Conread position:
               
69-466
               

               
Cow position:
               
chr22:30269617-30269229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
69-466
               

               
Cow position:
               
chr22:41970935-41971341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
104, 33
               

               
Conread position:
               
71-456
               

               
Cow position:
               
chr22:13286661-13286272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 50
               

               
Conread position:
               
71-466
               

               
Cow position:
               
chr22:25221684-25222087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 34
               

               
Conread position:
               
71-466
               

               
Cow position:
               
chr22:34441423-34441819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
72-399
               

               
Cow position:
               
chr22:31599651-31599324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
72-465
               

               
Cow position:
               
chr22:42612652-42612274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 48
               

               
Conread position:
               
72-547
               

               
Cow position:
               
chr22:37202070-37201573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 133
               

               
Conread position:
               
74-394
               

               
Cow position:
               
chr22:12829390-12829727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 146
               

               
Conread position:
               
75-359
               

               
Cow position:
               
chr22:8287397-8287110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
75-538
               

               
Cow position:
               
chr22:644574-645031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 43
               

               
Conread position:
               
76-368
               

               
Cow position:
               
chr22:14006384-14006091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 43
               

               
Conread position:
               
76-423
               

               
Cow position:
               
chr22:530363-530723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
76-437
               

               
Cow position:
               
chr22:15618813-15618455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
76-466
               

               
Cow position:
               
chr22:7165174-7164768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
43, 202
               

               
Conread position:
               
76-510
               

               
Cow position:
               
chr22:40349547-40349105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 35
               

               
Conread position:
               
76-540
               

               
Cow position:
               
chr22:11131082-11130601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
76-546
               

               
Cow position:
               
chr22:41245447-41244964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 21
               

               
Conread position:
               
77-369
               

               
Cow position:
               
chr22:17652649-17652342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
26, 191
               

               
Conread position:
               
77-377
               

               
Cow position:
               
chr22:27828593-27828285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
40, 229
               

               
Conread position:
               
77-426
               

               
Cow position:
               
chr22:16094702-16095049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
77-462
               

               
Cow position:
               
chr22:18926568-18926171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 18
               

               
Conread position:
               
77-536
               

               
Cow position:
               
chr22:15490871-15490390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 296
               

               
Conread position:
               
77-541
               

               
Cow position:
               
chr22:13866884-13866370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
39, 147
               

               
Conread position:
               
78-538
               

               
Cow position:
               
chr22:18259429-18258957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
78-539
               

               
Cow position:
               
chr22:26339968-26339487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
78-543
               

               
Cow position:
               
chr22:40387366-40386887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
38, 242
               

               
Conread position:
               
79-397
               

               
Cow position:
               
chr22:13094589-13094279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
214, 54
               

               
Conread position:
               
79-462
               

               
Cow position:
               
chr22:18838463-18838070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
79-463
               

               
Cow position:
               
chr22:3960087-3960474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
79-463
               

               
Cow position:
               
chr22:5291068-5290661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
79-466
               

               
Cow position:
               
chr22:2404084-2403688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
17, 42
               

               
Conread position:
               
79-466
               

               
Cow position:
               
chr22:18196713-18196325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
79-466
               

               
Cow position:
               
chr22:21205506-21205161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
198, 26
               

               
Conread position:
               
79-466
               

               
Cow position:
               
chr22:44717923-44717526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
79-518
               

               
Cow position:
               
chr22:6327571-6328018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
72, 52
               

               
Conread position:
               
79-521
               

               
Cow position:
               
chr22:33447865-33448331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
79-526
               

               
Cow position:
               
chr22:19652787-19653242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
80-367
               

               
Cow position:
               
chr22:25690065-25690370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
80-459
               

               
Cow position:
               
chr22:23980000-23980394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
80-464
               

               
Cow position:
               
chr22:21905670-21905312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 47
               

               
Conread position:
               
80-473
               

               
Cow position:
               
chr22:37029404-37029794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
80-531
               

               
Cow position:
               
chr22:8733134-8733588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 29
               

               
Conread position:
               
80-536
               

               
Cow position:
               
chr22:18020829-18021292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
80-538
               

               
Cow position:
               
chr22:28071759-28071283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
80-538
               

               
Cow position:
               
chr22:45271784-45271308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
80-546
               

               
Cow position:
               
chr22:40374821-40374328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
17, 205
               

               
Conread position:
               
80-562
               

               
Cow position:
               
chr22:21568193-21567709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
81-278
               

               
Cow position:
               
chr22:12777183-12777375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
92, 37
               

               
Conread position:
               
81-305
               

               
Cow position:
               
chr22:1552109-1551873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
81-364
               

               
Cow position:
               
chr22:12678220-12678506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
59, 37
               

               
Conread position:
               
81-400
               

               
Cow position:
               
chr22:34619010-34618674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 111
               

               
Conread position:
               
81-407
               

               
Cow position:
               
chr22:12929067-12929404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
81-415
               

               
Cow position:
               
chr22:27681937-27681578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
81-452
               

               
Cow position:
               
chr22:12803187-12803559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
81-459
               

               
Cow position:
               
chr22:36562814-36563200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
84, 118
               

               
Conread position:
               
81-460
               

               
Cow position:
               
chr22:11696993-11697386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
10, 91
               

               
Conread position:
               
81-460
               

               
Cow position:
               
chr22:25764291-25764666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
67, 41
               

               
Conread position:
               
81-460
               

               
Cow position:
               
chr22:46665285-46665680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
81-462
               

               
Cow position:
               
chr22:12316008-12315631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
81-463
               

               
Cow position:
               
chr22:1309526-1309913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
81-463
               

               
Cow position:
               
chr22:4535121-4535508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 118
               

               
Conread position:
               
81-463
               

               
Cow position:
               
chr22:14690758-14691157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
81-463
               

               
Cow position:
               
chr22:15567811-15568199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
81-463
               

               
Cow position:
               
chr22:37066587-37066979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
18, 237
               

               
Conread position:
               
81-466
               

               
Cow position:
               
chr22:1289329-1289703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
84, 37
               

               
Conread position:
               
81-466
               

               
Cow position:
               
chr22:4075673-4076083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
81-466
               

               
Cow position:
               
chr22:7882751-7882366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
81-466
               

               
Cow position:
               
chr22:12313621-12313235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
81-466
               

               
Cow position:
               
chr22:16291722-16292105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
81-468
               

               
Cow position:
               
chr22:34895167-34894786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
91, 28
               

               
Conread position:
               
81-506
               

               
Cow position:
               
chr22:5384835-5384414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 32
               

               
Conread position:
               
81-510
               

               
Cow position:
               
chr22:12800889-12800429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
81-521
               

               
Cow position:
               
chr22:41982522-41982971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
81-524
               

               
Cow position:
               
chr22:32698971-32698528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 16
               

               
Conread position:
               
81-531
               

               
Cow position:
               
chr22:4060747-4061205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
34, 52
               

               
Conread position:
               
81-531
               

               
Cow position:
               
chr22:25247120-25246644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
81-532
               

               
Cow position:
               
chr22:14142913-14143373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
81-534
               

               
Cow position:
               
chr22:32661722-32661245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
81-536
               

               
Cow position:
               
chr22:10684886-10685353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
35, 149
               

               
Conread position:
               
81-538
               

               
Cow position:
               
chr22:10122579-10122117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
81-538
               

               
Cow position:
               
chr22:11613627-11613157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 24
               

               
Conread position:
               
81-538
               

               
Cow position:
               
chr22:13687903-13688383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
91, 28
               

               
Conread position:
               
81-539
               

               
Cow position:
               
chr22:534690-534219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 27
               

               
Conread position:
               
81-562
               

               
Cow position:
               
chr22:23833499-23832998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
35, 80
               

               
Conread position:
               
81-562
               

               
Cow position:
               
chr22:40048759-40048265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
82-277
               

               
Cow position:
               
chr22:30687227-30687029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
82-373
               

               
Cow position:
               
chr22:25809070-25809365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 113
               

               
Conread position:
               
82-390
               

               
Cow position:
               
chr22:24903791-24903478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
83, 32
               

               
Conread position:
               
82-414
               

               
Cow position:
               
chr22:44410916-44410590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
82-452
               

               
Cow position:
               
chr22:6096806-6097197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
82-460
               

               
Cow position:
               
chr22:3987733-3987334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
34, 182
               

               
Conread position:
               
82-466
               

               
Cow position:
               
chr22:5616505-5616116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 109
               

               
Conread position:
               
82-466
               

               
Cow position:
               
chr22:16621392-16620989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 368
               

               
Conread position:
               
82-510
               

               
Cow position:
               
chr22:8090335-8090743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
82-518
               

               
Cow position:
               
chr22:40120665-40121132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
82-521
               

               
Cow position:
               
chr22:4563566-4563106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
82-543
               

               
Cow position:
               
chr22:8324448-8323971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 126
               

               
Conread position:
               
82-566
               

               
Cow position:
               
chr22:3325787-3325281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 33
               

               
Conread position:
               
83-297
               

               
Cow position:
               
chr22:2876599-2876814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
81, 25
               

               
Conread position:
               
83-389
               

               
Cow position:
               
chr22:27508840-27508539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
187, 28
               

               
Conread position:
               
83-399
               

               
Cow position:
               
chr22:43237202-43237528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
83-444
               

               
Cow position:
               
chr22:22908378-22908025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
85, 41
               

               
Conread position:
               
83-461
               

               
Cow position:
               
chr22:38438959-38439337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
68, 37
               

               
Conread position:
               
83-466
               

               
Cow position:
               
chr22:13957437-13957834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
83-466
               

               
Cow position:
               
chr22:27577954-27577549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 26
               

               
Conread position:
               
83-466
               

               
Cow position:
               
chr22:36432764-36433154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
82, 19
               

               
Conread position:
               
83-531
               

               
Cow position:
               
chr22:39507841-39508300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
83-533
               

               
Cow position:
               
chr22:10338907-10339380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
35, 196
               

               
Conread position:
               
83-536
               

               
Cow position:
               
chr22:10567509-10567958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
83-541
               

               
Cow position:
               
chr22:19341401-19340928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
84-311
               

               
Cow position:
               
chr22:17184506-17184717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
146, 27
               

               
Conread position:
               
84-313
               

               
Cow position:
               
chr22:12447657-12447423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
84-439
               

               
Cow position:
               
chr22:33399281-33399642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
84-467
               

               
Cow position:
               
chr22:12573414-12573018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
32, 120
               

               
Conread position:
               
84-499
               

               
Cow position:
               
chr22:10962758-10963193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
34, 89
               

               
Conread position:
               
84-500
               

               
Cow position:
               
chr22:25236931-25237376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 117
               

               
Conread position:
               
84-538
               

               
Cow position:
               
chr22:3842815-3842355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
49, 66
               

               
Conread position:
               
85-311
               

               
Cow position:
               
chr22:23372662-23372895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
85-377
               

               
Cow position:
               
chr22:13222322-13222013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 176
               

               
Conread position:
               
85-388
               

               
Cow position:
               
chr22:47556058-47555741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
85-452
               

               
Cow position:
               
chr22:16533269-16532906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
43, 61
               

               
Conread position:
               
85-466
               

               
Cow position:
               
chr22:4993719-4994105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
85-466
               

               
Cow position:
               
chr22:5016696-5016324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
85-466
               

               
Cow position:
               
chr22:14178626-14179016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 14
               

               
Conread position:
               
85-466
               

               
Cow position:
               
chr22:19787504-19787864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
230, 28
               

               
Conread position:
               
85-551
               

               
Cow position:
               
chr22:24583864-24584333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
31, 175
               

               
Conread position:
               
85-561
               

               
Cow position:
               
chr22:2623325-2623811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 16
               

               
Conread position:
               
86-466
               

               
Cow position:
               
chr22:9977990-9977635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
140, 26
               

               
Conread position:
               
86-466
               

               
Cow position:
               
chr22:10303211-10302826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
46, 84
               

               
Conread position:
               
86-466
               

               
Cow position:
               
chr22:27171064-27171442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
86-467
               

               
Cow position:
               
chr22:44835843-44835457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
86-526
               

               
Cow position:
               
chr22:10295224-10294789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
79, 21
               

               
Conread position:
               
86-543
               

               
Cow position:
               
chr22:33485429-33485880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
87-454
               

               
Cow position:
               
chr22:30818415-30818035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 117
               

               
Conread position:
               
87-461
               

               
Cow position:
               
chr22:14844749-14844391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
89-366
               

               
Cow position:
               
chr22:26123101-26122809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 176
               

               
Conread position:
               
90-546
               

               
Cow position:
               
chr22:34726867-34726396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 66
               

               
Conread position:
               
91-311
               

               
Cow position:
               
chr22:4156614-4156848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
91-538
               

               
Cow position:
               
chr22:38978044-38977577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 226
               

               
Conread position:
               
92-375
               

               
Cow position:
               
chr22:14509292-14509563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
134, 71
               

               
Conread position:
               
96-291
               

               
Cow position:
               
chr22:1830240-1830039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 162
               

               
Conread position:
               
97-364
               

               
Cow position:
               
chr22:1858517-1858247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 5
               

               
Conread position:
               
97-391
               

               
Cow position:
               
chr22:5837456-5837155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
19, 12
               

               
Conread position:
               
97-438
               

               
Cow position:
               
chr22:43131359-43131708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
19, 12
               

               
Conread position:
               
97-461
               

               
Cow position:
               
chr22:33386333-33386687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
97-462
               

               
Cow position:
               
chr22:22860716-22861092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 12
               

               
Conread position:
               
97-466
               

               
Cow position:
               
chr22:9127594-9127218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
19, 41
               

               
Conread position:
               
97-531
               

               
Cow position:
               
chr22:27819192-27818737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
19, 5
               

               
Conread position:
               
97-533
               

               
Cow position:
               
chr22:27224304-27223866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
97-537
               

               
Cow position:
               
chr22:9372721-9372248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 12
               

               
Conread position:
               
99-452
               

               
Cow position:
               
chr22:41854096-41853722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
17, 162
               

               
Conread position:
               
99-536
               

               
Cow position:
               
chr22:21746831-21746368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
10, 108
               

               
Conread position:
               
100-315
               

               
Cow position:
               
chr22:17129196-17128978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
100-466
               

               
Cow position:
               
chr22:30471505-30471872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
16, 132
               

               
Conread position:
               
101-467
               

               
Cow position:
               
chr22:19738402-19738763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 12
               

               
Conread position:
               
102-354
               

               
Cow position:
               
chr22:26017569-26017816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
102-385
               

               
Cow position:
               
chr22:12892170-12892477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 205
               

               
Conread position:
               
102-424
               

               
Cow position:
               
chr22:14372358-14372039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
14, 157
               

               
Conread position:
               
102-453
               

               
Cow position:
               
chr22:30699356-30699004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
102-461
               

               
Cow position:
               
chr22:17852447-17852802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
14, 100
               

               
Conread position:
               
102-462
               

               
Cow position:
               
chr22:2524141-2523782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 65
               

               
Conread position:
               
102-471
               

               
Cow position:
               
chr22:8412721-8412334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
102-527
               

               
Cow position:
               
chr22:39696488-39696034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
14, 113
               

               
Conread position:
               
102-535
               

               
Cow position:
               
chr22:32480276-32480733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 268
               

               
Conread position:
               
102-540
               

               
Cow position:
               
chr22:6215366-6215829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
14, 161
               

               
Conread position:
               
102-541
               

               
Cow position:
               
chr22:6610167-6610626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
14, 102
               

               
Conread position:
               
102-543
               

               
Cow position:
               
chr22:8418655-8418191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 167
               

               
Conread position:
               
102-546
               

               
Cow position:
               
chr22:25477219-25476786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
102-568
               

               
Cow position:
               
chr22:19047641-19048105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 61
               

               
Conread position:
               
108-339
               

               
Cow position:
               
chr22:15737415-15737171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
109-543
               

               
Cow position:
               
chr22:38939768-38940226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 64
               

               
Conread position:
               
111-400
               

               
Cow position:
               
chr22:10609539-10609232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
5, 19
               

               
Conread position:
               
113-325
               

               
Cow position:
               
chr22:3945535-3945333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
117, 50
               

               
Conread position:
               
114-396
               

               
Cow position:
               
chr22:23750724-23751008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
114-455
               

               
Cow position:
               
chr22:17126624-17126277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
56, 161
               

               
Conread position:
               
115-262
               

               
Cow position:
               
chr22:6793704-6793856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
115-306
               

               
Cow position:
               
chr22:28937766-28937958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 79
               

               
Conread position:
               
115-310
               

               
Cow position:
               
chr22:18847795-18847994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
59, 83
               

               
Conread position:
               
115-329
               

               
Cow position:
               
chr22:23675797-23676017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 141
               

               
Conread position:
               
115-344
               

               
Cow position:
               
chr22:28672311-28672078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
115, 65
               

               
Conread position:
               
115-352
               

               
Cow position:
               
chr22:35029435-35029191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
115-363
               

               
Cow position:
               
chr22:10553523-10553770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
115, 36
               

               
Conread position:
               
115-372
               

               
Cow position:
               
chr22:25254350-25254081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 221
               

               
Conread position:
               
115-374
               

               
Cow position:
               
chr22:9597409-9597676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 142
               

               
Conread position:
               
115-376
               

               
Cow position:
               
chr22:18933535-18933820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
115-394
               

               
Cow position:
               
chr22:1911826-1911554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
111, 43
               

               
Conread position:
               
115-399
               

               
Cow position:
               
chr22:4135769-4135498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
40, 95
               

               
Conread position:
               
115-419
               

               
Cow position:
               
chr22:21325560-21325875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
47, 28
               

               
Conread position:
               
115-421
               

               
Cow position:
               
chr22:11766872-11767193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
115-452
               

               
Cow position:
               
chr22:7913630-7913306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
68, 132
               

               
Conread position:
               
115-466
               

               
Cow position:
               
chr22:10532669-10532310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
59, 202
               

               
Conread position:
               
115-466
               

               
Cow position:
               
chr22:13300564-13300225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
115, 35
               

               
Conread position:
               
115-466
               

               
Cow position:
               
chr22:14378516-14378868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
50, 164
               

               
Conread position:
               
115-466
               

               
Cow position:
               
chr22:22023080-22022702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
115-466
               

               
Cow position:
               
chr22:25361653-25361306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
68, 140
               

               
Conread position:
               
115-466
               

               
Cow position:
               
chr22:26150940-26151304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
50, 98
               

               
Conread position:
               
115-466
               

               
Cow position:
               
chr22:30484080-30483728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 50
               

               
Conread position:
               
115-466
               

               
Cow position:
               
chr22:36539483-36539857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 82
               

               
Conread position:
               
115-466
               

               
Cow position:
               
chr22:41829059-41829414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
60, 136
               

               
Conread position:
               
115-486
               

               
Cow position:
               
chr22:20862588-20862970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
57, 112
               

               
Conread position:
               
115-524
               

               
Cow position:
               
chr22:4583737-4583311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 330
               

               
Conread position:
               
115-524
               

               
Cow position:
               
chr22:23180870-23181293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 88
               

               
Conread position:
               
115-530
               

               
Cow position:
               
chr22:590495-590077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
115, 45
               

               
Conread position:
               
115-530
               

               
Cow position:
               
chr22:45513348-45513785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
50, 123
               

               
Conread position:
               
115-533
               

               
Cow position:
               
chr22:29954840-29955267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 65
               

               
Conread position:
               
115-534
               

               
Cow position:
               
chr22:20627009-20626571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 252
               

               
Conread position:
               
115-536
               

               
Cow position:
               
chr22:43398175-43397748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
115-538
               

               
Cow position:
               
chr22:25943635-25943210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 37
               

               
Conread position:
               
115-541
               

               
Cow position:
               
chr22:16251389-16251837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 155
               

               
Conread position:
               
115-541
               

               
Cow position:
               
chr22:31870079-31870523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
57, 131
               

               
Conread position:
               
115-544
               

               
Cow position:
               
chr22:4651337-4650903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
97, 32
               

               
Conread position:
               
115-545
               

               
Cow position:
               
chr22:5467189-5467647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
126, 65
               

               
Conread position:
               
115-546
               

               
Cow position:
               
chr22:31646659-31646214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
116-388
               

               
Cow position:
               
chr22:37030349-37030631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 182
               

               
Conread position:
               
116-441
               

               
Cow position:
               
chr22:3534106-3533781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
40, 150
               

               
Conread position:
               
116-461
               

               
Cow position:
               
chr22:12389277-12388908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 326
               

               
Conread position:
               
116-466
               

               
Cow position:
               
chr22:1849250-1848880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 348
               

               
Conread position:
               
116-473
               

               
Cow position:
               
chr22:4989993-4990364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
116-538
               

               
Cow position:
               
chr22:41044734-41045185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
108, 10
               

               
Conread position:
               
116-571
               

               
Cow position:
               
chr22:46610602-46611088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 91
               

               
Conread position:
               
117-428
               

               
Cow position:
               
chr22:15668309-15668624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 137
               

               
Conread position:
               
117-444
               

               
Cow position:
               
chr22:15024935-15025271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
48, 146
               

               
Conread position:
               
117-471
               

               
Cow position:
               
chr22:8397671-8398004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
113, 45
               

               
Conread position:
               
117-536
               

               
Cow position:
               
chr22:1651663-1651247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 190
               

               
Conread position:
               
117-543
               

               
Cow position:
               
chr22:13669993-13670447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
53, 98
               

               
Conread position:
               
120-546
               

               
Cow position:
               
chr22:5337445-5337876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 53
               

               
Conread position:
               
121-432
               

               
Cow position:
               
chr22:40789730-40789415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
121-460
               

               
Cow position:
               
chr22:4373207-4372863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
49, 135
               

               
Conread position:
               
121-466
               

               
Cow position:
               
chr22:17294779-17295115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 17
               

               
Conread position:
               
121-466
               

               
Cow position:
               
chr22:28357200-28356851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
44, 190
               

               
Conread position:
               
121-467
               

               
Cow position:
               
chr22:40072135-40071788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
109, 12
               

               
Conread position:
               
122-451
               

               
Cow position:
               
chr22:36633374-36633057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
183, 43
               

               
Conread position:
               
125-364
               

               
Cow position:
               
chr22:12749744-12749985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
105, 147
               

               
Conread position:
               
125-458
               

               
Cow position:
               
chr22:6622082-6622422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
49, 102
               

               
Conread position:
               
125-466
               

               
Cow position:
               
chr22:1326587-1326233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
125-538
               

               
Cow position:
               
chr22:7154041-7153616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
44, 138
               

               
Conread position:
               
127-455
               

               
Cow position:
               
chr22:34609165-34608822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 5
               

               
Conread position:
               
128-466
               

               
Cow position:
               
chr22:15039021-15039369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
41, 227
               

               
Conread position:
               
132-314
               

               
Cow position:
               
chr22:14381807-14381625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
98, 33
               

               
Conread position:
               
132-435
               

               
Cow position:
               
chr22:10293099-10292805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
167, 47
               

               
Conread position:
               
132-449
               

               
Cow position:
               
chr22:22553079-22553405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 101
               

               
Conread position:
               
132-523
               

               
Cow position:
               
chr22:27581593-27581191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 190
               

               
Conread position:
               
132-538
               

               
Cow position:
               
chr22:27322466-27322048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
134-462
               

               
Cow position:
               
chr22:1563104-1563434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 120
               

               
Conread position:
               
134-462
               

               
Cow position:
               
chr22:27274553-27274873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
96, 14
               

               
Conread position:
               
134-546
               

               
Cow position:
               
chr22:30515405-30514975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
85, 382
               

               
Conread position:
               
136-466
               

               
Cow position:
               
chr22:17764523-17764193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
94, 11
               

               
Conread position:
               
140-463
               

               
Cow position:
               
chr22:10421174-10420850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
70, 7
               

               
Conread position:
               
142-311
               

               
Cow position:
               
chr22:11344643-11344479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
88, 23
               

               
Conread position:
               
150-535
               

               
Cow position:
               
chr22:14924599-14924992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 281
               

               
Conread position:
               
150-542
               

               
Cow position:
               
chr22:13769612-13769209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
21, 157
               

               
Conread position:
               
152-461
               

               
Cow position:
               
chr22:1067782-1068095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 104
               

               
Conread position:
               
152-466
               

               
Cow position:
               
chr22:10919727-10920048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 17
               

               
Conread position:
               
152-534
               

               
Cow position:
               
chr22:8840735-8840316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
152-538
               

               
Cow position:
               
chr22:24610965-24611347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
153-463
               

               
Cow position:
               
chr22:4017602-4017294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
77, 94
               

               
Conread position:
               
153-466
               

               
Cow position:
               
chr22:4119435-4119752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
153-466
               

               
Cow position:
               
chr22:23806414-23806730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
154-466
               

               
Cow position:
               
chr22:23176312-23176629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 182
               

               
Conread position:
               
154-540
               

               
Cow position:
               
chr22:24175768-24176149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
76, 97
               

               
Conread position:
               
156-506
               

               
Cow position:
               
chr22:23403516-23403882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 219
               

               
Conread position:
               
157-467
               

               
Cow position:
               
chr22:7301716-7302028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
157-532
               

               
Cow position:
               
chr22:32651614-32651238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
153, 12
               

               
Conread position:
               
158-436
               

               
Cow position:
               
chr22:7102955-7102674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
72, 11
               

               
Conread position:
               
158-537
               

               
Cow position:
               
chr22:22997599-22997205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
158-543
               

               
Cow position:
               
chr22:32188730-32189115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
72, 101
               

               
Conread position:
               
160-466
               

               
Cow position:
               
chr22:34750793-34750493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
160-470
               

               
Cow position:
               
chr22:7852086-7851771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 137
               

               
Conread position:
               
160-534
               

               
Cow position:
               
chr22:14638353-14638732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
5, 104
               

               
Conread position:
               
160-536
               

               
Cow position:
               
chr22:17814354-17813957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 90
               

               
Conread position:
               
161-368
               

               
Cow position:
               
chr22:10286091-10285876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 44
               

               
Conread position:
               
161-419
               

               
Cow position:
               
chr22:31154076-31153815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
23, 195
               

               
Conread position:
               
161-439
               

               
Cow position:
               
chr22:2912467-2912743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
12, 49
               

               
Conread position:
               
161-447
               

               
Cow position:
               
chr22:1265803-1266098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
161-449
               

               
Cow position:
               
chr22:26969909-26969611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
67, 15
               

               
Conread position:
               
161-456
               

               
Cow position:
               
chr22:13841261-13840959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 110
               

               
Conread position:
               
161-462
               

               
Cow position:
               
chr22:3950373-3950066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
161-466
               

               
Cow position:
               
chr22:3965307-3965001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 114
               

               
Conread position:
               
161-466
               

               
Cow position:
               
chr22:16044297-16044609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 8
               

               
Conread position:
               
161-466
               

               
Cow position:
               
chr22:36560536-36560845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 136
               

               
Conread position:
               
161-514
               

               
Cow position:
               
chr22:3252838-3253185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
161-520
               

               
Cow position:
               
chr22:8115967-8116337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
161-520
               

               
Cow position:
               
chr22:12967949-12968324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
161-531
               

               
Cow position:
               
chr22:877636-877257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 259
               

               
Conread position:
               
161-536
               

               
Cow position:
               
chr22:1609651-1610027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
161-539
               

               
Cow position:
               
chr22:27328772-27329157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
55, 120
               

               
Conread position:
               
161-540
               

               
Cow position:
               
chr22:38981007-38980632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
162-467
               

               
Cow position:
               
chr22:14119095-14118789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
164-435
               

               
Cow position:
               
chr22:45846258-45845989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 16
               

               
Conread position:
               
166-401
               

               
Cow position:
               
chr22:6936372-6936143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
166-423
               

               
Cow position:
               
chr22:25540115-25539846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
64, 238
               

               
Conread position:
               
166-439
               

               
Cow position:
               
chr22:34606704-34606422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
70, 12
               

               
Conread position:
               
166-444
               

               
Cow position:
               
chr22:27047296-27047567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
166-447
               

               
Cow position:
               
chr22:27741006-27740719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
64, 118
               

               
Conread position:
               
166-455
               

               
Cow position:
               
chr22:28665399-28665110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
64, 155
               

               
Conread position:
               
166-466
               

               
Cow position:
               
chr22:21502860-21502555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
166-520
               

               
Cow position:
               
chr22:26659159-26658800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 87
               

               
Conread position:
               
166-560
               

               
Cow position:
               
chr22:37324659-37324254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 173
               

               
Conread position:
               
166-562
               

               
Cow position:
               
chr22:2216925-2216525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
64, 83
               

               
Conread position:
               
166-571
               

               
Cow position:
               
chr22:28351553-28351938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
84, 50
               

               
Conread position:
               
167-437
               

               
Cow position:
               
chr22:32895332-32895057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 87
               

               
Conread position:
               
167-533
               

               
Cow position:
               
chr22:8481759-8481378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 92
               

               
Conread position:
               
167-536
               

               
Cow position:
               
chr22:1279270-1279657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
63, 301
               

               
Conread position:
               
169-479
               

               
Cow position:
               
chr22:42945935-42946257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
169-533
               

               
Cow position:
               
chr22:19775321-19775693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
47, 38
               

               
Conread position:
               
169-536
               

               
Cow position:
               
chr22:26184048-26184431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 109
               

               
Conread position:
               
171-442
               

               
Cow position:
               
chr22:24628548-24628814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
171-467
               

               
Cow position:
               
chr22:18126624-18126920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
59, 38
               

               
Conread position:
               
171-531
               

               
Cow position:
               
chr22:34475888-34476266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
23, 348
               

               
Conread position:
               
171-536
               

               
Cow position:
               
chr22:21012494-21012119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
172-368
               

               
Cow position:
               
chr22:13878287-13878094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 81
               

               
Conread position:
               
172-377
               

               
Cow position:
               
chr22:26075031-26074823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
172-390
               

               
Cow position:
               
chr22:23735905-23736123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
58, 79
               

               
Conread position:
               
172-391
               

               
Cow position:
               
chr22:6852475-6852696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
172-452
               

               
Cow position:
               
chr22:16823200-16822929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
64, 41
               

               
Conread position:
               
172-462
               

               
Cow position:
               
chr22:34712835-34712533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 28
               

               
Conread position:
               
172-466
               

               
Cow position:
               
chr22:30049457-30049757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
172-466
               

               
Cow position:
               
chr22:44180703-44180409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
58, 100
               

               
Conread position:
               
172-519
               

               
Cow position:
               
chr22:2627690-2627322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
58, 270
               

               
Conread position:
               
172-535
               

               
Cow position:
               
chr22:28057940-28058311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 100
               

               
Conread position:
               
172-536
               

               
Cow position:
               
chr22:2502935-2502567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
58, 79
               

               
Conread position:
               
172-536
               

               
Cow position:
               
chr22:26316566-26316208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
58, 80
               

               
Conread position:
               
172-537
               

               
Cow position:
               
chr22:34616416-34616035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
58, 80
               

               
Conread position:
               
172-546
               

               
Cow position:
               
chr22:23857156-23856770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 122
               

               
Conread position:
               
173-452
               

               
Cow position:
               
chr22:21530250-21530525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
53, 120
               

               
Conread position:
               
178-466
               

               
Cow position:
               
chr22:9521247-9520962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
179-385
               

               
Cow position:
               
chr22:28704287-28704082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 183
               

               
Conread position:
               
179-471
               

               
Cow position:
               
chr22:11458918-11458634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
180-452
               

               
Cow position:
               
chr22:17125684-17125408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
50, 95
               

               
Conread position:
               
180-460
               

               
Cow position:
               
chr22:46567792-46568067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
243, 63
               

               
Conread position:
               
180-466
               

               
Cow position:
               
chr22:10633016-10632731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
50, 91
               

               
Conread position:
               
180-466
               

               
Cow position:
               
chr22:26141376-26141088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
180-538
               

               
Cow position:
               
chr22:4645873-4645506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
181-463
               

               
Cow position:
               
chr22:21355040-21355326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
181-531
               

               
Cow position:
               
chr22:12946081-12946432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
209, 47
               

               
Conread position:
               
181-569
               

               
Cow position:
               
chr22:15090843-15090433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
52, 78
               

               
Conread position:
               
183-462
               

               
Cow position:
               
chr22:24734220-24734490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
183-467
               

               
Cow position:
               
chr22:4161524-4161798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 5
               

               
Conread position:
               
184-370
               

               
Cow position:
               
chr22:18293667-18293853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 96
               

               
Conread position:
               
186-439
               

               
Cow position:
               
chr22:139205-139465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
41, 109
               

               
Conread position:
               
187-467
               

               
Cow position:
               
chr22:39293649-39293932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
44, 32
               

               
Conread position:
               
188-467
               

               
Cow position:
               
chr22:5622624-5622904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
190-525
               

               
Cow position:
               
chr22:1975701-1975352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 75
               

               
Conread position:
               
192-439
               

               
Cow position:
               
chr22:27835624-27835369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
7, 81
               

               
Conread position:
               
192-536
               

               
Cow position:
               
chr22:34398366-34398726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
193-463
               

               
Cow position:
               
chr22:22160815-22160539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
194-537
               

               
Cow position:
               
chr22:30955105-30954767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
253, 39
               

               
Conread position:
               
195-534
               

               
Cow position:
               
chr22:1484950-1484591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
35, 206
               

               
Conread position:
               
196-466
               

               
Cow position:
               
chr22:43291816-43292085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 49
               

               
Conread position:
               
197-537
               

               
Cow position:
               
chr22:11257663-11258008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
198-532
               

               
Cow position:
               
chr22:42605721-42605365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
32, 350
               

               
Conread position:
               
200-452
               

               
Cow position:
               
chr22:3367268-3367018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 147
               

               
Conread position:
               
201-526
               

               
Cow position:
               
chr22:7838671-7838344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
203-431
               

               
Cow position:
               
chr22:15760441-15760215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
204-466
               

               
Cow position:
               
chr22:31592778-31593045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
26, 62
               

               
Conread position:
               
206-455
               

               
Cow position:
               
chr22:3241627-3241873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 60
               

               
Conread position:
               
206-466
               

               
Cow position:
               
chr22:13849377-13849634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
24, 64
               

               
Conread position:
               
208-531
               

               
Cow position:
               
chr22:30964202-30963866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
22, 209
               

               
Conread position:
               
209-543
               

               
Cow position:
               
chr22:17992958-17993307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
210-466
               

               
Cow position:
               
chr22:26134152-26134419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
215-467
               

               
Cow position:
               
chr22:14882051-14882295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 29
               

               
Conread position:
               
215-532
               

               
Cow position:
               
chr22:912165-911835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
220-466
               

               
Cow position:
               
chr22:10983412-10983160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 155
               

               
Conread position:
               
220-474
               

               
Cow position:
               
chr22:38930445-38930707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
221-452
               

               
Cow position:
               
chr22:27825901-27825662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
224-466
               

               
Cow position:
               
chr22:10677935-10678169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
225-452
               

               
Cow position:
               
chr22:23689149-23689380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
226-467
               

               
Cow position:
               
chr22:39302945-39303192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
81, 70
               

               
Conread position:
               
226-521
               

               
Cow position:
               
chr22:23855027-23854725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
90, 40
               

               
Conread position:
               
226-533
               

               
Cow position:
               
chr22:26097566-26097881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
226-538
               

               
Cow position:
               
chr22:3993664-3993339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 100
               

               
Conread position:
               
226-557
               

               
Cow position:
               
chr22:29013934-29013588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
229-466
               

               
Cow position:
               
chr22:30689687-30689447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
84, 47
               

               
Conread position:
               
229-471
               

               
Cow position:
               
chr22:1640249-1640499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
229-536
               

               
Cow position:
               
chr22:14376361-14376662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
172, 90
               

               
Conread position:
               
230-534
               

               
Cow position:
               
chr22:30710455-30710134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
36, 181
               

               
Conread position:
               
230-536
               

               
Cow position:
               
chr22:226404-226707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 116
               

               
Conread position:
               
235-460
               

               
Cow position:
               
chr22:26041644-26041417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 153
               

               
Conread position:
               
244-463
               

               
Cow position:
               
chr22:25629728-25629948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
245-460
               

               
Cow position:
               
chr22:6202950-6202735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 134
               

               
Conread position:
               
251-538
               

               
Cow position:
               
chr22:853051-852758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
5, 42
               

               
Conread position:
               
253-455
               

               
Cow position:
               
chr22:43938126-43937926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
253-543
               

               
Cow position:
               
chr22:6122876-6123171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
16, 103
               

               
Conread position:
               
254-541
               

               
Cow position:
               
chr22:26490493-26490187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
52, 293
               

               
Conread position:
               
256-463
               

               
Cow position:
               
chr22:22146259-22146045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
256-537
               

               
Cow position:
               
chr22:16057727-16057431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
258-422
               

               
Cow position:
               
chr22:4564504-4564663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
259-555
               

               
Cow position:
               
chr22:26749023-26749344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 95
               

               
Conread position:
               
260-466
               

               
Cow position:
               
chr22:1602210-1601999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
115, 73
               

               
Conread position:
               
268-424
               

               
Cow position:
               
chr22:26506712-26506870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
40, 127
               

               
Conread position:
               
268-452
               

               
Cow position:
               
chr22:33415009-33415197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 49
               

               
Conread position:
               
268-506
               

               
Cow position:
               
chr22:4974411-4974651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
45, 78
               

               
Conread position:
               
268-536
               

               
Cow position:
               
chr22:11500791-11500511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
133, 161
               

               
Conread position:
               
268-538
               

               
Cow position:
               
chr22:5042326-5042048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
194, 40
               

               
Conread position:
               
269-433
               

               
Cow position:
               
chr22:15020387-15020557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
269-446
               

               
Cow position:
               
chr22:11497212-11497025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
269-467
               

               
Cow position:
               
chr22:28179869-28179658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
53, 176
               

               
Conread position:
               
269-537
               

               
Cow position:
               
chr22:6360475-6360758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 274
               

               
Conread position:
               
270-445
               

               
Cow position:
               
chr22:12599097-12598920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 127
               

               
Conread position:
               
270-455
               

               
Cow position:
               
chr22:1727884-1727705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
270-466
               

               
Cow position:
               
chr22:10363078-10362870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
270-466
               

               
Cow position:
               
chr22:30712770-30712567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
270-507
               

               
Cow position:
               
chr22:12777581-12777825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
270-522
               

               
Cow position:
               
chr22:28731687-28731429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 238
               

               
Conread position:
               
270-533
               

               
Cow position:
               
chr22:25342026-25341752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
131, 22
               

               
Conread position:
               
270-562
               

               
Cow position:
               
chr22:4632015-4631712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 195
               

               
Conread position:
               
272-521
               

               
Cow position:
               
chr22:14601512-14601258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
42, 161
               

               
Conread position:
               
276-450
               

               
Cow position:
               
chr22:18218885-18219059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
119, 159
               

               
Conread position:
               
276-462
               

               
Cow position:
               
chr22:10403497-10403676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
280-441
               

               
Cow position:
               
chr22:27292090-27291932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
280-462
               

               
Cow position:
               
chr22:20687302-20687113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
90, 156
               

               
Conread position:
               
280-535
               

               
Cow position:
               
chr22:2010802-2010528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
281-536
               

               
Cow position:
               
chr22:39472377-39472647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
282-465
               

               
Cow position:
               
chr22:29256312-29256498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
284-463
               

               
Cow position:
               
chr22:1821875-1822056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
284-534
               

               
Cow position:
               
chr22:26107055-26106787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
292-536
               

               
Cow position:
               
chr22:9734841-9734585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
299-461
               

               
Cow position:
               
chr22:26123347-26123509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 128
               

               
Conread position:
               
304-463
               

               
Cow position:
               
chr22:30107138-30106982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
304-467
               

               
Cow position:
               
chr22:33917923-33918084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 114
               

               
Conread position:
               
304-546
               

               
Cow position:
               
chr22:30473022-30472767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
14, 237
               

               
Conread position:
               
304-571
               

               
Cow position:
               
chr22:19848420-19848702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
20, 124
               

               
Conread position:
               
309-453
               

               
Cow position:
               
chr22:3945145-3944999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
309-531
               

               
Cow position:
               
chr22:11837238-11837467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
66, 117
               

               
Conread position:
               
310-568
               

               
Cow position:
               
chr22:4026574-4026306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
150, 101
               

               
Conread position:
               
312-521
               

               
Cow position:
               
chr22:27401502-27401289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
313-463
               

               
Cow position:
               
chr22:3541757-3541901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
79, 111
               

               
Conread position:
               
313-534
               

               
Cow position:
               
chr22:15959802-15960042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
314-466
               

               
Cow position:
               
chr22:37554658-37554810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-474
               

               
Cow position:
               
chr22:1081467-1081311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
134, 22
               

               
Conread position:
               
314-522
               

               
Cow position:
               
chr22:1991440-1991232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
133, 18
               

               
Conread position:
               
319-536
               

               
Cow position:
               
chr22:34666006-34665781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
82, 23
               

               
Conread position:
               
319-571
               

               
Cow position:
               
chr22:7252683-7252937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
91, 148
               

               
Conread position:
               
320-538
               

               
Cow position:
               
chr22:13016837-13017052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
134, 40
               

               
Conread position:
               
323-466
               

               
Cow position:
               
chr22:22148033-22147887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
323-543
               

               
Cow position:
               
chr22:33949044-33949281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
324-464
               

               
Cow position:
               
chr22:25783969-25784109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 119
               

               
Conread position:
               
324-510
               

               
Cow position:
               
chr22:19376663-19376465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
328-463
               

               
Cow position:
               
chr22:44386456-44386583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
330-466
               

               
Cow position:
               
chr22:11987266-11987401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 96
               

               
Conread position:
               
330-531
               

               
Cow position:
               
chr22:11200984-11200777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
331-534
               

               
Cow position:
               
chr22:8302905-8303115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
64, 165
               

               
Conread position:
               
344-542
               

               
Cow position:
               
chr22:34930810-34931025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
346-463
               

               
Cow position:
               
chr22:12974457-12974574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
350-533
               

               
Cow position:
               
chr22:11489461-11489276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
98, 153
               

               
Conread position:
               
360-453
               

               
Cow position:
               
chr22:34986188-34986280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               
Show alignments to all cow chromosomes.