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Cow genome map

           
Conread name:
           
rpldo0136_h2.y1
        

               
Conread position:
               
50-466
               

               
Cow position:
               
chr25:12778313-12778715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
27, 57
               

               
Conread position:
               
62-286
               

               
Cow position:
               
chr25:33100799-33100567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
63-466
               

               
Cow position:
               
chr25:22315423-22315018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
63-547
               

               
Cow position:
               
chr25:9989882-9990370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 126
               

               
Conread position:
               
64-404
               

               
Cow position:
               
chr25:9843397-9843052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
67-443
               

               
Cow position:
               
chr25:41150748-41151124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
71-408
               

               
Cow position:
               
chr25:4245876-4245561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 20
               

               
Conread position:
               
71-452
               

               
Cow position:
               
chr25:2136562-2136178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 77
               

               
Conread position:
               
73-283
               

               
Cow position:
               
chr25:15553109-15552911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
157, 40
               

               
Conread position:
               
73-412
               

               
Cow position:
               
chr25:18201719-18202059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
44, 98
               

               
Conread position:
               
73-466
               

               
Cow position:
               
chr25:17704955-17704566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
74-536
               

               
Cow position:
               
chr25:11436605-11437072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
42, 28
               

               
Conread position:
               
74-537
               

               
Cow position:
               
chr25:26701229-26700769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 42
               

               
Conread position:
               
75-399
               

               
Cow position:
               
chr25:30817117-30816766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
78-545
               

               
Cow position:
               
chr25:17701795-17702242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
79-394
               

               
Cow position:
               
chr25:17725252-17724940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 130
               

               
Conread position:
               
79-420
               

               
Cow position:
               
chr25:33686470-33686820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
79-466
               

               
Cow position:
               
chr25:12899970-12899571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
86, 30
               

               
Conread position:
               
80-421
               

               
Cow position:
               
chr25:22731028-22730691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
92, 36
               

               
Conread position:
               
80-428
               

               
Cow position:
               
chr25:12609546-12609196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
80-466
               

               
Cow position:
               
chr25:16921590-16921977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 94
               

               
Conread position:
               
81-391
               

               
Cow position:
               
chr25:17474311-17474627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
81-399
               

               
Cow position:
               
chr25:432836-433165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
84, 21
               

               
Conread position:
               
81-402
               

               
Cow position:
               
chr25:12932808-12932507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
145, 12
               

               
Conread position:
               
81-421
               

               
Cow position:
               
chr25:34378913-34379245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
34, 50
               

               
Conread position:
               
81-463
               

               
Cow position:
               
chr25:6473873-6474279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
13, 335
               

               
Conread position:
               
81-466
               

               
Cow position:
               
chr25:11957017-11956642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
35, 269
               

               
Conread position:
               
81-466
               

               
Cow position:
               
chr25:22203486-22203873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
81-466
               

               
Cow position:
               
chr25:33550713-33550322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
91, 37
               

               
Conread position:
               
81-467
               

               
Cow position:
               
chr25:14720942-14720568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
81-519
               

               
Cow position:
               
chr25:16400096-16400503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
348, 50
               

               
Conread position:
               
81-539
               

               
Cow position:
               
chr25:447959-448427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 117
               

               
Conread position:
               
81-542
               

               
Cow position:
               
chr25:18720926-18721378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
82-407
               

               
Cow position:
               
chr25:17119956-17119613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 217
               

               
Conread position:
               
82-424
               

               
Cow position:
               
chr25:21668449-21668101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
36, 51
               

               
Conread position:
               
82-435
               

               
Cow position:
               
chr25:36020622-36020251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
82-442
               

               
Cow position:
               
chr25:26679428-26679065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
58, 45
               

               
Conread position:
               
82-447
               

               
Cow position:
               
chr25:30462109-30462467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
82-452
               

               
Cow position:
               
chr25:27801491-27801118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
82-456
               

               
Cow position:
               
chr25:12755290-12755669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 31
               

               
Conread position:
               
82-462
               

               
Cow position:
               
chr25:7750648-7750271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
190, 42
               

               
Conread position:
               
82-462
               

               
Cow position:
               
chr25:13272770-13272390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 36
               

               
Conread position:
               
83-248
               

               
Cow position:
               
chr25:12223774-12223604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
83-405
               

               
Cow position:
               
chr25:33457939-33457604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
83-437
               

               
Cow position:
               
chr25:31732133-31732492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 35
               

               
Conread position:
               
83-456
               

               
Cow position:
               
chr25:34768538-34768897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
83-466
               

               
Cow position:
               
chr25:10643116-10643493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 35
               

               
Conread position:
               
83-466
               

               
Cow position:
               
chr25:12098044-12097659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
83-510
               

               
Cow position:
               
chr25:22242161-22241757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
83-531
               

               
Cow position:
               
chr25:18448997-18448572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
147, 28
               

               
Conread position:
               
83-536
               

               
Cow position:
               
chr25:21245393-21245876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
83-538
               

               
Cow position:
               
chr25:26655092-26654637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 27
               

               
Conread position:
               
84-466
               

               
Cow position:
               
chr25:36746249-36746629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
81, 43
               

               
Conread position:
               
84-530
               

               
Cow position:
               
chr25:10504136-10504600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
84-534
               

               
Cow position:
               
chr25:14791953-14791483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 23
               

               
Conread position:
               
85-431
               

               
Cow position:
               
chr25:30619267-30618914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 172
               

               
Conread position:
               
85-463
               

               
Cow position:
               
chr25:7641247-7641634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
85-466
               

               
Cow position:
               
chr25:26089618-26089997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 43
               

               
Conread position:
               
86-363
               

               
Cow position:
               
chr25:35052421-35052705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
86-441
               

               
Cow position:
               
chr25:9056362-9056027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
86-452
               

               
Cow position:
               
chr25:20785390-20785757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
86-455
               

               
Cow position:
               
chr25:27532476-27532849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
40, 86
               

               
Conread position:
               
87-443
               

               
Cow position:
               
chr25:21893539-21893174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
87-538
               

               
Cow position:
               
chr25:30319242-30319719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
89-466
               

               
Cow position:
               
chr25:7581228-7581611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 216
               

               
Conread position:
               
90-269
               

               
Cow position:
               
chr25:10817233-10817407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
85, 26
               

               
Conread position:
               
97-521
               

               
Cow position:
               
chr25:1838439-1837985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 12
               

               
Conread position:
               
97-537
               

               
Cow position:
               
chr25:7217013-7216557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 140
               

               
Conread position:
               
99-392
               

               
Cow position:
               
chr25:36555504-36555802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
99-453
               

               
Cow position:
               
chr25:13295058-13294727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
101-414
               

               
Cow position:
               
chr25:12509828-12510144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 69
               

               
Conread position:
               
101-515
               

               
Cow position:
               
chr25:24405559-24405985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
102-237
               

               
Cow position:
               
chr25:27916193-27916056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
102-351
               

               
Cow position:
               
chr25:33555800-33555536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 104
               

               
Conread position:
               
102-394
               

               
Cow position:
               
chr25:25716835-25716537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
71, 97
               

               
Conread position:
               
102-461
               

               
Cow position:
               
chr25:20069905-20069542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 118
               

               
Conread position:
               
102-464
               

               
Cow position:
               
chr25:26457504-26457865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
102-467
               

               
Cow position:
               
chr25:20076671-20076313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
102-478
               

               
Cow position:
               
chr25:19130046-19129655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
14, 116
               

               
Conread position:
               
102-518
               

               
Cow position:
               
chr25:24669260-24669682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
14, 124
               

               
Conread position:
               
102-521
               

               
Cow position:
               
chr25:14513298-14512861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 417
               

               
Conread position:
               
102-524
               

               
Cow position:
               
chr25:9269532-9269115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 159
               

               
Conread position:
               
102-538
               

               
Cow position:
               
chr25:2111228-2110813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
14, 96
               

               
Conread position:
               
102-538
               

               
Cow position:
               
chr25:4521649-4522087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
14, 154
               

               
Conread position:
               
102-546
               

               
Cow position:
               
chr25:17975207-17975644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
103-312
               

               
Cow position:
               
chr25:26072372-26072588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 171
               

               
Conread position:
               
107-534
               

               
Cow position:
               
chr25:13325756-13325332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
9, 64
               

               
Conread position:
               
108-467
               

               
Cow position:
               
chr25:25753839-25754181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
9, 59
               

               
Conread position:
               
108-546
               

               
Cow position:
               
chr25:33663723-33664173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
8, 94
               

               
Conread position:
               
115-247
               

               
Cow position:
               
chr25:10303704-10303568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
115-294
               

               
Cow position:
               
chr25:36155988-36155809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 105
               

               
Conread position:
               
115-295
               

               
Cow position:
               
chr25:36872878-36873070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
115-313
               

               
Cow position:
               
chr25:6259061-6258851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
115-327
               

               
Cow position:
               
chr25:35109101-35109313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
111, 156
               

               
Conread position:
               
115-335
               

               
Cow position:
               
chr25:24863045-24862820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
50, 138
               

               
Conread position:
               
115-347
               

               
Cow position:
               
chr25:17403653-17403416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
50, 156
               

               
Conread position:
               
115-355
               

               
Cow position:
               
chr25:34788092-34788339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
115, 45
               

               
Conread position:
               
115-365
               

               
Cow position:
               
chr25:12807220-12806958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
50, 141
               

               
Conread position:
               
115-442
               

               
Cow position:
               
chr25:6996962-6996619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 154
               

               
Conread position:
               
115-448
               

               
Cow position:
               
chr25:24651280-24651617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
102, 64
               

               
Conread position:
               
115-452
               

               
Cow position:
               
chr25:11316079-11315737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 82
               

               
Conread position:
               
115-458
               

               
Cow position:
               
chr25:23053740-23053381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 237
               

               
Conread position:
               
115-463
               

               
Cow position:
               
chr25:16867422-16867049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
50, 268
               

               
Conread position:
               
115-465
               

               
Cow position:
               
chr25:13387964-13387630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
136, 11
               

               
Conread position:
               
115-466
               

               
Cow position:
               
chr25:17190577-17190927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 138
               

               
Conread position:
               
115-466
               

               
Cow position:
               
chr25:17342638-17342266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
115-466
               

               
Cow position:
               
chr25:19679529-19679159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
50, 79
               

               
Conread position:
               
115-466
               

               
Cow position:
               
chr25:36082044-36081690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 51
               

               
Conread position:
               
115-474
               

               
Cow position:
               
chr25:1823914-1824290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
46, 252
               

               
Conread position:
               
115-475
               

               
Cow position:
               
chr25:13443230-13443607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
50, 157
               

               
Conread position:
               
115-504
               

               
Cow position:
               
chr25:1763261-1762869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
58, 146
               

               
Conread position:
               
115-519
               

               
Cow position:
               
chr25:26087695-26087262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 140
               

               
Conread position:
               
115-520
               

               
Cow position:
               
chr25:38135930-38135493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 304
               

               
Conread position:
               
115-535
               

               
Cow position:
               
chr25:26224859-26225306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
59, 210
               

               
Conread position:
               
115-562
               

               
Cow position:
               
chr25:20008311-20007845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 235
               

               
Conread position:
               
116-377
               

               
Cow position:
               
chr25:6928340-6928606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 137
               

               
Conread position:
               
116-452
               

               
Cow position:
               
chr25:23244828-23245182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
53, 143
               

               
Conread position:
               
116-466
               

               
Cow position:
               
chr25:5846629-5846990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
49, 276
               

               
Conread position:
               
117-395
               

               
Cow position:
               
chr25:26240695-26240422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
113, 43
               

               
Conread position:
               
117-408
               

               
Cow position:
               
chr25:3373212-3373501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
48, 70
               

               
Conread position:
               
117-414
               

               
Cow position:
               
chr25:19363885-19364193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 285
               

               
Conread position:
               
117-439
               

               
Cow position:
               
chr25:23779158-23779478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 203
               

               
Conread position:
               
117-462
               

               
Cow position:
               
chr25:7306465-7306119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
48, 78
               

               
Conread position:
               
117-467
               

               
Cow position:
               
chr25:8120956-8120592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 153
               

               
Conread position:
               
118-562
               

               
Cow position:
               
chr25:17658786-17658322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 272
               

               
Conread position:
               
119-463
               

               
Cow position:
               
chr25:36535245-36535616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
120-460
               

               
Cow position:
               
chr25:8157337-8157687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 120
               

               
Conread position:
               
120-531
               

               
Cow position:
               
chr25:16065054-16064632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
125-466
               

               
Cow position:
               
chr25:11661660-11662003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 44
               

               
Conread position:
               
125-531
               

               
Cow position:
               
chr25:788424-788004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 141
               

               
Conread position:
               
127-331
               

               
Cow position:
               
chr25:21594556-21594755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 93
               

               
Conread position:
               
127-543
               

               
Cow position:
               
chr25:24573228-24572796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
6, 143
               

               
Conread position:
               
128-466
               

               
Cow position:
               
chr25:40321130-40321476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
42, 67
               

               
Conread position:
               
133-502
               

               
Cow position:
               
chr25:12840571-12840954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 18
               

               
Conread position:
               
143-457
               

               
Cow position:
               
chr25:32277465-32277778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 88
               

               
Conread position:
               
152-466
               

               
Cow position:
               
chr25:18988512-18988193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 38
               

               
Conread position:
               
153-394
               

               
Cow position:
               
chr25:36872488-36872247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 162
               

               
Conread position:
               
153-555
               

               
Cow position:
               
chr25:28187815-28188235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 141
               

               
Conread position:
               
154-419
               

               
Cow position:
               
chr25:16691784-16691523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
160, 16
               

               
Conread position:
               
157-467
               

               
Cow position:
               
chr25:14466968-14467270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
5, 25
               

               
Conread position:
               
158-519
               

               
Cow position:
               
chr25:18266288-18265911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 11
               

               
Conread position:
               
158-527
               

               
Cow position:
               
chr25:24136317-24136696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
161-375
               

               
Cow position:
               
chr25:5920201-5919987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
161-376
               

               
Cow position:
               
chr25:12252687-12252909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
65, 98
               

               
Conread position:
               
161-441
               

               
Cow position:
               
chr25:12319233-12319506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
142, 15
               

               
Conread position:
               
161-452
               

               
Cow position:
               
chr25:36762227-36761933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
69, 85
               

               
Conread position:
               
161-458
               

               
Cow position:
               
chr25:36017655-36017359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
161-466
               

               
Cow position:
               
chr25:4547596-4547903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 133
               

               
Conread position:
               
161-537
               

               
Cow position:
               
chr25:22531403-22531016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 92
               

               
Conread position:
               
161-555
               

               
Cow position:
               
chr25:23917964-23917554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 93
               

               
Conread position:
               
162-536
               

               
Cow position:
               
chr25:6424499-6424855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
105, 34
               

               
Conread position:
               
166-366
               

               
Cow position:
               
chr25:23817724-23817935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
166-373
               

               
Cow position:
               
chr25:36120615-36120408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 145
               

               
Conread position:
               
166-416
               

               
Cow position:
               
chr25:24202896-24203129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
166-467
               

               
Cow position:
               
chr25:11585635-11585334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 215
               

               
Conread position:
               
166-467
               

               
Cow position:
               
chr25:18906002-18905697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
166-536
               

               
Cow position:
               
chr25:13569059-13569437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
167-422
               

               
Cow position:
               
chr25:12997721-12997449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
167-456
               

               
Cow position:
               
chr25:22750892-22751190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
167-463
               

               
Cow position:
               
chr25:13672519-13672208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
167-463
               

               
Cow position:
               
chr25:14196977-14196676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
168-467
               

               
Cow position:
               
chr25:40956873-40957172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
169-441
               

               
Cow position:
               
chr25:6961037-6961315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
17, 247
               

               
Conread position:
               
170-443
               

               
Cow position:
               
chr25:32191777-32191507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
47, 79
               

               
Conread position:
               
171-412
               

               
Cow position:
               
chr25:14157737-14157489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
59, 216
               

               
Conread position:
               
171-452
               

               
Cow position:
               
chr25:17144547-17144254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
49, 96
               

               
Conread position:
               
171-466
               

               
Cow position:
               
chr25:20133204-20133498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
171-466
               

               
Cow position:
               
chr25:25051265-25051567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
171-466
               

               
Cow position:
               
chr25:25861239-25861543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
171-537
               

               
Cow position:
               
chr25:18161394-18161035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
153, 34
               

               
Conread position:
               
172-366
               

               
Cow position:
               
chr25:26052013-26051814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
172-449
               

               
Cow position:
               
chr25:41363041-41363317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
172-466
               

               
Cow position:
               
chr25:61761-61474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
58, 83
               

               
Conread position:
               
172-534
               

               
Cow position:
               
chr25:18564597-18564225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
58, 81
               

               
Conread position:
               
172-544
               

               
Cow position:
               
chr25:21267098-21266730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
179, 52
               

               
Conread position:
               
172-546
               

               
Cow position:
               
chr25:21894774-21895164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 352
               

               
Conread position:
               
174-540
               

               
Cow position:
               
chr25:5407851-5407477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
56, 85
               

               
Conread position:
               
179-433
               

               
Cow position:
               
chr25:8961874-8961620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 85
               

               
Conread position:
               
181-429
               

               
Cow position:
               
chr25:6688047-6687800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
49, 71
               

               
Conread position:
               
181-472
               

               
Cow position:
               
chr25:18894627-18894912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
181-533
               

               
Cow position:
               
chr25:36036677-36037047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
49, 72
               

               
Conread position:
               
182-436
               

               
Cow position:
               
chr25:5474131-5474383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
192-452
               

               
Cow position:
               
chr25:38425448-38425192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
123, 23
               

               
Conread position:
               
192-507
               

               
Cow position:
               
chr25:15377417-15377092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
192-535
               

               
Cow position:
               
chr25:35612222-35612570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
38, 106
               

               
Conread position:
               
192-537
               

               
Cow position:
               
chr25:9349193-9349528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
193-533
               

               
Cow position:
               
chr25:33978130-33978468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
120, 58
               

               
Conread position:
               
194-466
               

               
Cow position:
               
chr25:16714180-16714457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
197-461
               

               
Cow position:
               
chr25:11989428-11989696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
198-456
               

               
Cow position:
               
chr25:15440692-15440957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 70
               

               
Conread position:
               
198-536
               

               
Cow position:
               
chr25:14118176-14117839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
198-555
               

               
Cow position:
               
chr25:22296941-22297303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
56, 38
               

               
Conread position:
               
203-516
               

               
Cow position:
               
chr25:20019923-20020237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
27, 49
               

               
Conread position:
               
210-545
               

               
Cow position:
               
chr25:17566660-17566311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
20, 119
               

               
Conread position:
               
215-533
               

               
Cow position:
               
chr25:12081256-12081582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
85, 51
               

               
Conread position:
               
220-466
               

               
Cow position:
               
chr25:12293684-12293934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
220-535
               

               
Cow position:
               
chr25:18294251-18294581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
220-536
               

               
Cow position:
               
chr25:33959189-33959530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 52
               

               
Conread position:
               
220-537
               

               
Cow position:
               
chr25:6463968-6464300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
90, 211
               

               
Conread position:
               
225-466
               

               
Cow position:
               
chr25:1735266-1735499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
226-447
               

               
Cow position:
               
chr25:19317320-19317094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 17
               

               
Conread position:
               
226-466
               

               
Cow position:
               
chr25:21289401-21289157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
226-543
               

               
Cow position:
               
chr25:12260834-12261170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
226-546
               

               
Cow position:
               
chr25:6803601-6803287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
228, 103
               

               
Conread position:
               
231-545
               

               
Cow position:
               
chr25:9754046-9754352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
165, 84
               

               
Conread position:
               
233-537
               

               
Cow position:
               
chr25:9956990-9957303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
81, 63
               

               
Conread position:
               
238-452
               

               
Cow position:
               
chr25:8560912-8560694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 186
               

               
Conread position:
               
244-524
               

               
Cow position:
               
chr25:12239110-12239397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
67, 264
               

               
Conread position:
               
247-466
               

               
Cow position:
               
chr25:25827506-25827279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
248-538
               

               
Cow position:
               
chr25:12204510-12204200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
11, 188
               

               
Conread position:
               
249-452
               

               
Cow position:
               
chr25:11319035-11318837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
253-413
               

               
Cow position:
               
chr25:7299184-7299355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
254-540
               

               
Cow position:
               
chr25:6891503-6891791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
255-510
               

               
Cow position:
               
chr25:11054929-11054680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
58, 7
               

               
Conread position:
               
256-429
               

               
Cow position:
               
chr25:22332786-22332612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
43, 10
               

               
Conread position:
               
258-403
               

               
Cow position:
               
chr25:13640404-13640260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
258-466
               

               
Cow position:
               
chr25:36779524-36779309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
259-452
               

               
Cow position:
               
chr25:31705025-31704820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
259-535
               

               
Cow position:
               
chr25:35333182-35332904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
7, 220
               

               
Conread position:
               
261-466
               

               
Cow position:
               
chr25:31732711-31732919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
10, 162
               

               
Conread position:
               
268-443
               

               
Cow position:
               
chr25:6121756-6121931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
121, 40
               

               
Conread position:
               
268-463
               

               
Cow position:
               
chr25:13736300-13736491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 93
               

               
Conread position:
               
268-571
               

               
Cow position:
               
chr25:35625171-35625477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
48, 75
               

               
Conread position:
               
269-452
               

               
Cow position:
               
chr25:26058597-26058415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
269-460
               

               
Cow position:
               
chr25:36033450-36033259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
269-534
               

               
Cow position:
               
chr25:7801153-7800866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 104
               

               
Conread position:
               
270-436
               

               
Cow position:
               
chr25:32587867-32588036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
270-470
               

               
Cow position:
               
chr25:9961162-9961364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
114, 43
               

               
Conread position:
               
270-493
               

               
Cow position:
               
chr25:23323211-23322993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
125, 38
               

               
Conread position:
               
270-535
               

               
Cow position:
               
chr25:13642301-13642585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
270-538
               

               
Cow position:
               
chr25:36124696-36124429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 188
               

               
Conread position:
               
270-546
               

               
Cow position:
               
chr25:5515025-5514723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
43, 253
               

               
Conread position:
               
270-554
               

               
Cow position:
               
chr25:12824006-12824305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 158
               

               
Conread position:
               
272-441
               

               
Cow position:
               
chr25:14945441-14945610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
38, 155
               

               
Conread position:
               
274-535
               

               
Cow position:
               
chr25:22549640-22549881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
275-530
               

               
Cow position:
               
chr25:10138100-10137834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
35, 89
               

               
Conread position:
               
276-463
               

               
Cow position:
               
chr25:8918271-8918455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
40, 86
               

               
Conread position:
               
276-466
               

               
Cow position:
               
chr25:3983045-3982861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
276-539
               

               
Cow position:
               
chr25:35345036-35344765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
277-536
               

               
Cow position:
               
chr25:14224799-14225065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
36, 87
               

               
Conread position:
               
280-466
               

               
Cow position:
               
chr25:12520963-12521144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
19, 7
               

               
Conread position:
               
280-536
               

               
Cow position:
               
chr25:9634900-9634650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
283-466
               

               
Cow position:
               
chr25:7329547-7329361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
30, 79
               

               
Conread position:
               
292-524
               

               
Cow position:
               
chr25:16001536-16001779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
293-466
               

               
Cow position:
               
chr25:20060042-20060214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
294-529
               

               
Cow position:
               
chr25:24452187-24452431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 71
               

               
Conread position:
               
296-532
               

               
Cow position:
               
chr25:36026993-36026740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
298-448
               

               
Cow position:
               
chr25:36138665-36138811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
303-447
               

               
Cow position:
               
chr25:13333402-13333256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
309-443
               

               
Cow position:
               
chr25:21042352-21042219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
309-449
               

               
Cow position:
               
chr25:8485522-8485667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
311-466
               

               
Cow position:
               
chr25:15286574-15286723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
313-458
               

               
Cow position:
               
chr25:27504211-27504359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
313-467
               

               
Cow position:
               
chr25:4002767-4002612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
88, 117
               

               
Conread position:
               
313-519
               

               
Cow position:
               
chr25:395319-395102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
139, 61
               

               
Conread position:
               
313-519
               

               
Cow position:
               
chr25:10365786-10366005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 35
               

               
Conread position:
               
315-453
               

               
Cow position:
               
chr25:2596150-2596004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
316-566
               

               
Cow position:
               
chr25:33839343-33839091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
77, 151
               

               
Conread position:
               
319-466
               

               
Cow position:
               
chr25:35110165-35110313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
319-481
               

               
Cow position:
               
chr25:6255976-6256139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
323-463
               

               
Cow position:
               
chr25:35607764-35607902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 41
               

               
Conread position:
               
324-467
               

               
Cow position:
               
chr25:18237713-18237571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
326-537
               

               
Cow position:
               
chr25:15319872-15319652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
136, 24
               

               
Conread position:
               
330-452
               

               
Cow position:
               
chr25:14931810-14931936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 71
               

               
Conread position:
               
330-466
               

               
Cow position:
               
chr25:37562659-37562524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
344-538
               

               
Cow position:
               
chr25:20348797-20348588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 198
               
Show alignments to all cow chromosomes.