Cow genome map

Conread name: rpldo0136_h2.y1

Conread position: 61-295
Cow position: chr29:36781086-36781318 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 50

Conread position: 63-466
Cow position: chr29:42363789-42364201 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 270
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 34

Conread position: 63-521
Cow position: chr29:31593926-31594369 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 298
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 54, 17

Conread position: 64-463
Cow position: chr29:44988575-44988961 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 27

Conread position: 67-463
Cow position: chr29:4874661-4875076 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 268
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 14, 152

Conread position: 67-467
Cow position: chr29:1022509-1022106 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 12

Conread position: 71-387
Cow position: chr29:19250556-19250238 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 222
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 144, 39

Conread position: 71-466
Cow position: chr29:16657915-16657502 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 124

Conread position: 72-528
Cow position: chr29:22613645-22613174 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 308
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 32

Conread position: 73-310
Cow position: chr29:31934597-31934350 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 12, 25

Conread position: 73-533
Cow position: chr29:27668431-27668908 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 320
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 28, 324

Conread position: 74-453
Cow position: chr29:11366434-11366072 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 262
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 31, 6

Conread position: 75-466
Cow position: chr29:16609960-16609555 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 270
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 16, 72

Conread position: 76-538
Cow position: chr29:29057386-29056914 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 15

Conread position: 76-541
Cow position: chr29:32799496-32799977 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 17

Conread position: 77-257
Cow position: chr29:11489379-11489560 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 17

Conread position: 77-395
Cow position: chr29:8862284-8862595 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 19

Conread position: 78-545
Cow position: chr29:32733508-32733053 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 321
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 47, 38

Conread position: 79-399
Cow position: chr29:12625783-12626098 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 37, 20

Conread position: 79-452
Cow position: chr29:35442263-35442634 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 246
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 10, 84

Conread position: 79-462
Cow position: chr29:11916036-11915638 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 22

Conread position: 79-463
Cow position: chr29:30441157-30440746 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 147

Conread position: 79-479
Cow position: chr29:30188126-30188538 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 299
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 86, 34

Conread position: 79-506
Cow position: chr29:39023140-39023577 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 286
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 25, 85

Conread position: 79-521
Cow position: chr29:29769149-29769600 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 45

Conread position: 79-536
Cow position: chr29:31929203-31928710 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 80

Conread position: 79-538
Cow position: chr29:4121071-4120577 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 339
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 37, 23

Conread position: 80-288
Cow position: chr29:29308368-29308578 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 36, 22

Conread position: 80-389
Cow position: chr29:5046867-5046543 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 215
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 22

Conread position: 80-464
Cow position: chr29:23698184-23697798 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 275
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 94, 29

Conread position: 81-255
Cow position: chr29:23678915-23678736 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 35, 175

Conread position: 81-352
Cow position: chr29:23825870-23825596 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 145, 30

Conread position: 81-376
Cow position: chr29:22721556-22721277 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 149, 29

Conread position: 81-393
Cow position: chr29:7310866-7310575 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 149, 29

Conread position: 81-452
Cow position: chr29:22068528-22068920 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 271
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 35, 30

Conread position: 81-454
Cow position: chr29:22175893-22175517 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 148

Conread position: 81-458
Cow position: chr29:36531069-36530689 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 251
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 67, 38

Conread position: 81-462
Cow position: chr29:3711580-3711208 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 267
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 10, 53

Conread position: 81-462
Cow position: chr29:26275815-26275435 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 265
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 163

Conread position: 81-466
Cow position: chr29:19762466-19762090 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 39

Conread position: 81-514
Cow position: chr29:25737217-25737664 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 303
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 94, 16

Conread position: 81-519
Cow position: chr29:13028653-13028205 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 309
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 37, 93

Conread position: 81-536
Cow position: chr29:35501452-35501917 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 23

Conread position: 81-537
Cow position: chr29:23874678-23874186 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 336
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 15, 294

Conread position: 81-538
Cow position: chr29:21196441-21196919 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 331
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 35, 11

Conread position: 81-546
Cow position: chr29:35292302-35291823 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 300

Conread position: 81-568
Cow position: chr29:13634117-13634599 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 335
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 149, 37

Conread position: 81-571
Cow position: chr29:12680370-12679847 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 15

Conread position: 81-579
Cow position: chr29:34773536-34774038 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 337
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 35, 19

Conread position: 82-310
Cow position: chr29:396613-396384 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 34, 12

Conread position: 82-311
Cow position: chr29:4070834-4070598 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 17, 189

Conread position: 82-460
Cow position: chr29:9709905-9709518 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 269
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 34, 20

Conread position: 82-461
Cow position: chr29:32963739-32963377 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 47

Conread position: 82-466
Cow position: chr29:10818258-10818619 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 260
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 59, 36

Conread position: 82-466
Cow position: chr29:19949517-19949127 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 274
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 20

Conread position: 83-339
Cow position: chr29:17236635-17236376 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 11, 120

Conread position: 83-343
Cow position: chr29:5770000-5769732 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 33, 21

Conread position: 83-358
Cow position: chr29:8004722-8005001 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 51, 188

Conread position: 83-358
Cow position: chr29:22518920-22519208 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 132

Conread position: 83-368
Cow position: chr29:28994068-28993772 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 33, 251

Conread position: 83-404
Cow position: chr29:14758660-14758987 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 212
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 80

Conread position: 83-451
Cow position: chr29:5408930-5409318 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 256
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 33, 187

Conread position: 83-453
Cow position: chr29:27858989-27858619 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 259
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 71, 54

Conread position: 83-466
Cow position: chr29:4479966-4480358 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 260
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 70

Conread position: 83-507
Cow position: chr29:16309933-16309510 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 48

Conread position: 83-531
Cow position: chr29:40583986-40583533 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 310
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 59, 53

Conread position: 84-466
Cow position: chr29:17222627-17222226 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 264
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 13, 19

Conread position: 84-466
Cow position: chr29:31489534-31489137 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 10

Conread position: 84-466
Cow position: chr29:41112681-41113043 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 256
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 12

Conread position: 84-536
Cow position: chr29:45005433-45005883 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 316
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 49, 23

Conread position: 85-441
Cow position: chr29:2056259-2055899 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 252
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 88, 27

Conread position: 85-463
Cow position: chr29:25092314-25091929 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 260
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 31, 203

Conread position: 85-466
Cow position: chr29:27009626-27009236 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 263
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 6, 33

Conread position: 86-538
Cow position: chr29:17110151-17109699 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 307
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 65, 38

Conread position: 90-530
Cow position: chr29:10153610-10154024 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 294
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 136, 15

Conread position: 91-466
Cow position: chr29:28195329-28195699 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 76

Conread position: 91-531
Cow position: chr29:35281676-35281239 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 305
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 25, 125

Conread position: 97-262
Cow position: chr29:37293225-37293054 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 97-452
Cow position: chr29:41531048-41530677 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 12

Conread position: 97-461
Cow position: chr29:26259674-26259297 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 242
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 19, 372

Conread position: 97-466
Cow position: chr29:29475056-29475438 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 254
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 19, 168

Conread position: 97-527
Cow position: chr29:18021504-18021935 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 67

Conread position: 99-297
Cow position: chr29:19176719-19176928 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 163

Conread position: 100-466
Cow position: chr29:26779071-26778702 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 254
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 152

Conread position: 101-466
Cow position: chr29:37618502-37618123 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 263

Conread position: 101-521
Cow position: chr29:42771818-42771408 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 273
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 17, 9

Conread position: 102-343
Cow position: chr29:31651595-31651349 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 65

Conread position: 102-358
Cow position: chr29:43183125-43183386 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 42

Conread position: 102-444
Cow position: chr29:10653515-10653181 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 244
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 14, 135

Conread position: 102-444
Cow position: chr29:17297331-17296967 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 248
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 14, 107

Conread position: 102-451
Cow position: chr29:4085489-4085148 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 58

Conread position: 102-452
Cow position: chr29:11434305-11433950 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 36

Conread position: 102-456
Cow position: chr29:44681939-44682273 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 239
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 15, 73

Conread position: 102-466
Cow position: chr29:38581156-38580793 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 35

Conread position: 103-326
Cow position: chr29:27819397-27819174 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 57

Conread position: 103-339
Cow position: chr29:1011401-1011633 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 134

Conread position: 103-400
Cow position: chr29:11677289-11677581 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 61

Conread position: 103-452
Cow position: chr29:22895900-22895554 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 239
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 49

Conread position: 103-466
Cow position: chr29:2644129-2644491 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 218
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 13, 57

Conread position: 105-531
Cow position: chr29:39111134-39111572 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 94

Conread position: 108-311
Cow position: chr29:8686496-8686300 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 9, 57

Conread position: 113-535
Cow position: chr29:356482-356058 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 49

Conread position: 114-536
Cow position: chr29:34745483-34745923 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 300
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 100

Conread position: 115-248
Cow position: chr29:10191867-10192007 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 115-286
Cow position: chr29:2135350-2135522 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 50, 142

Conread position: 115-302
Cow position: chr29:415182-414993 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 50

Conread position: 115-306
Cow position: chr29:4423272-4423464 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 115, 62

Conread position: 115-324
Cow position: chr29:31982000-31981788 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 115-339
Cow position: chr29:43544427-43544661 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 168

Conread position: 115-366
Cow position: chr29:32894435-32894182 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 47

Conread position: 115-400
Cow position: chr29:30227102-30227393 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 191
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 57, 111

Conread position: 115-421
Cow position: chr29:18462376-18462696 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 62, 123

Conread position: 115-430
Cow position: chr29:3685343-3685661 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 57, 200

Conread position: 115-437
Cow position: chr29:17154940-17154610 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 242
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 115, 64

Conread position: 115-454
Cow position: chr29:10018746-10018399 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 227
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 115, 102

Conread position: 115-458
Cow position: chr29:6337829-6337483 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 36

Conread position: 115-462
Cow position: chr29:26017322-26017692 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 254
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 57, 168

Conread position: 115-463
Cow position: chr29:43328810-43328459 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 223
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 115, 27

Conread position: 115-466
Cow position: chr29:23845018-23844649 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 238
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 115-466
Cow position: chr29:24952865-24952502 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 122

Conread position: 115-466
Cow position: chr29:31674809-31674444 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 240
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 57, 243

Conread position: 115-466
Cow position: chr29:44236620-44236283 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 240
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 115, 63

Conread position: 115-487
Cow position: chr29:1395750-1395385 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 278
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 58, 17

Conread position: 115-511
Cow position: chr29:4520510-4520091 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 157

Conread position: 115-533
Cow position: chr29:32655265-32655690 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 282
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 22, 57

Conread position: 115-534
Cow position: chr29:6926159-6925753 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 294
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 190, 47

Conread position: 115-538
Cow position: chr29:16960-17374 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 313
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 112, 50

Conread position: 115-538
Cow position: chr29:34359648-34360063 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 142

Conread position: 115-543
Cow position: chr29:31926139-31926565 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 46

Conread position: 115-562
Cow position: chr29:2744091-2744564 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 310
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 77, 436

Conread position: 116-346
Cow position: chr29:30350773-30351001 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 153, 32

Conread position: 116-538
Cow position: chr29:10456403-10456821 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 273
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 117, 63

Conread position: 117-431
Cow position: chr29:44008631-44008933 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 196, 48

Conread position: 117-452
Cow position: chr29:27826681-27826353 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 229
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 105, 47

Conread position: 117-467
Cow position: chr29:708974-709306 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 248
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 72, 35

Conread position: 117-467
Cow position: chr29:19907508-19907172 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 242
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 198, 14

Conread position: 118-424
Cow position: chr29:35084048-35084367 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 206
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 18

Conread position: 118-467
Cow position: chr29:40097128-40096773 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 5

Conread position: 119-524
Cow position: chr29:34297397-34297822 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 281
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 229

Conread position: 121-438
Cow position: chr29:12025304-12025629 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 105

Conread position: 122-466
Cow position: chr29:22778007-22778364 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 133

Conread position: 123-546
Cow position: chr29:28775293-28775730 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 312
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 31, 152

Conread position: 126-539
Cow position: chr29:19428823-19428396 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 384

Conread position: 127-371
Cow position: chr29:30713551-30713800 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 217

Conread position: 127-452
Cow position: chr29:28979347-28979652 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 44

Conread position: 127-468
Cow position: chr29:8669521-8669182 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 64, 130

Conread position: 127-521
Cow position: chr29:45589434-45589838 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 264
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 36, 84

Conread position: 127-535
Cow position: chr29:21443170-21443614 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 294
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 127-536
Cow position: chr29:32290764-32290333 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 288
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 62, 10

Conread position: 132-463
Cow position: chr29:24624408-24624068 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 246
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 33, 154

Conread position: 133-516
Cow position: chr29:706806-707194 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 55

Conread position: 134-368
Cow position: chr29:31814089-31813860 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 146

Conread position: 134-533
Cow position: chr29:12783817-12784220 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 14

Conread position: 140-437
Cow position: chr29:40959707-40960005 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 192
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 90, 29

Conread position: 140-466
Cow position: chr29:11705253-11704940 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 84, 7

Conread position: 143-467
Cow position: chr29:13554276-13553949 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 51, 27

Conread position: 143-533
Cow position: chr29:109830-109444 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 277
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 45, 94

Conread position: 147-475
Cow position: chr29:28166086-28166410 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 119

Conread position: 150-377
Cow position: chr29:24578994-24578761 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 28

Conread position: 151-452
Cow position: chr29:11053730-11054027 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 14

Conread position: 152-534
Cow position: chr29:19821413-19821027 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 26

Conread position: 153-395
Cow position: chr29:13373431-13373187 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 77, 166

Conread position: 153-399
Cow position: chr29:42886670-42886433 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 77, 13

Conread position: 153-463
Cow position: chr29:32210939-32211239 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 21, 108

Conread position: 154-355
Cow position: chr29:7103687-7103480 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 140
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 155-536
Cow position: chr29:6293353-6293736 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 25

Conread position: 156-452
Cow position: chr29:6286034-6286330 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 201
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 74, 161

Conread position: 157-544
Cow position: chr29:9912302-9911899 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 40

Conread position: 158-446
Cow position: chr29:29559596-29559886 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 9

Conread position: 158-463
Cow position: chr29:26985351-26985045 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 206
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 10

Conread position: 158-467
Cow position: chr29:11071561-11071888 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 72, 40

Conread position: 158-538
Cow position: chr29:86887-87286 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 29

Conread position: 158-570
Cow position: chr29:26317976-26317557 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 267
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 11

Conread position: 160-538
Cow position: chr29:39567803-39567417 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 20

Conread position: 161-389
Cow position: chr29:847520-847750 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 69, 102

Conread position: 161-396
Cow position: chr29:40994769-40995005 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 86

Conread position: 161-435
Cow position: chr29:29314524-29314810 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 193
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 118

Conread position: 161-437
Cow position: chr29:11647216-11646940 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 69, 92

Conread position: 161-466
Cow position: chr29:19339123-19338797 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 228
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 69, 92

Conread position: 161-529
Cow position: chr29:39329481-39329836 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 258
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 69, 91

Conread position: 161-571
Cow position: chr29:6844510-6844930 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 121

Conread position: 164-467
Cow position: chr29:11005853-11005527 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 218
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 16

Conread position: 165-466
Cow position: chr29:4194010-4194305 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 65, 87

Conread position: 166-353
Cow position: chr29:5210608-5210413 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 77

Conread position: 166-442
Cow position: chr29:43251048-43251328 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 186
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 30

Conread position: 166-461
Cow position: chr29:23243759-23244061 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 203
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 8, 130

Conread position: 166-466
Cow position: chr29:40298903-40299195 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 130

Conread position: 166-536
Cow position: chr29:749790-750167 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 206

Conread position: 166-544
Cow position: chr29:25333344-25333729 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 268
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 64, 79

Conread position: 167-465
Cow position: chr29:12451490-12451189 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 27, 32

Conread position: 167-530
Cow position: chr29:22936387-22936018 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 261
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 44, 102

Conread position: 167-533
Cow position: chr29:16195956-16195586 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 268
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 63, 92

Conread position: 167-582
Cow position: chr29:6217429-6217862 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 67

Conread position: 169-466
Cow position: chr29:26334278-26334572 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 12

Conread position: 170-466
Cow position: chr29:17409446-17409148 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 60, 21

Conread position: 170-513
Cow position: chr29:10235024-10235361 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 170-547
Cow position: chr29:6015239-6014825 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 280
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 391

Conread position: 171-424
Cow position: chr29:11397815-11398067 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 9

Conread position: 171-466
Cow position: chr29:25475035-25474725 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 13, 23

Conread position: 171-466
Cow position: chr29:40853040-40852750 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 59, 171

Conread position: 171-483
Cow position: chr29:4334830-4334524 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 155, 48

Conread position: 171-531
Cow position: chr29:43496151-43495800 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 252
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 59, 74

Conread position: 172-358
Cow position: chr29:13867099-13867290 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 122

Conread position: 172-375
Cow position: chr29:2262884-2263092 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 81

Conread position: 172-456
Cow position: chr29:13639255-13639544 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 173

Conread position: 172-466
Cow position: chr29:20903179-20903470 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 58, 110

Conread position: 172-471
Cow position: chr29:44378308-44378606 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 137, 64

Conread position: 172-524
Cow position: chr29:13372774-13372406 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 247
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 58, 22

Conread position: 172-531
Cow position: chr29:5947695-5948051 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 252
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 55, 97

Conread position: 172-538
Cow position: chr29:36217223-36216849 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 255
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 143, 74

Conread position: 179-378
Cow position: chr29:27873705-27873506 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 112

Conread position: 179-462
Cow position: chr29:1229711-1229429 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 116

Conread position: 180-439
Cow position: chr29:26416454-26416201 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 50, 73

Conread position: 180-466
Cow position: chr29:17607519-17607234 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 50, 26

Conread position: 180-467
Cow position: chr29:11787898-11787609 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 14, 19

Conread position: 180-540
Cow position: chr29:26615614-26616000 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 257
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 269

Conread position: 182-466
Cow position: chr29:7966345-7966063 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 44, 9

Conread position: 182-535
Cow position: chr29:9638221-9638578 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 254
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 44, 9

Conread position: 183-419
Cow position: chr29:27329991-27329753 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 10

Conread position: 183-462
Cow position: chr29:9139517-9139230 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 8, 31

Conread position: 184-462
Cow position: chr29:28446157-28446438 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 80

Conread position: 184-466
Cow position: chr29:28868742-28868450 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 75

Conread position: 184-543
Cow position: chr29:2984989-2984609 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 265
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 46, 61

Conread position: 186-451
Cow position: chr29:19549130-19549397 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 112

Conread position: 187-462
Cow position: chr29:6870669-6870963 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 43, 260

Conread position: 187-463
Cow position: chr29:23983859-23984142 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 38, 72

Conread position: 190-447
Cow position: chr29:26319259-26319019 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 19

Conread position: 190-467
Cow position: chr29:15940537-15940820 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 40, 65

Conread position: 191-368
Cow position: chr29:693917-694089 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 14

Conread position: 191-453
Cow position: chr29:4805321-4805060 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 14

Conread position: 191-453
Cow position: chr29:24252327-24252065 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 39, 83

Conread position: 191-463
Cow position: chr29:463566-463833 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 120, 18

Conread position: 191-466
Cow position: chr29:32521962-32521686 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 120, 35

Conread position: 193-466
Cow position: chr29:41365199-41364927 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 58

Conread position: 194-462
Cow position: chr29:26653955-26654219 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 122

Conread position: 194-466
Cow position: chr29:868864-868590 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 36, 237

Conread position: 194-530
Cow position: chr29:26330287-26329955 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 237
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 32, 14

Conread position: 194-537
Cow position: chr29:94480-94813 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 118, 43

Conread position: 198-471
Cow position: chr29:11562698-11562426 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 32, 61

Conread position: 199-427
Cow position: chr29:4051907-4052131 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 116, 27

Conread position: 201-532
Cow position: chr29:9937998-9938332 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 220
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 25, 18

Conread position: 201-543
Cow position: chr29:34736397-34736740 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 237
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 22, 50

Conread position: 204-463
Cow position: chr29:17668566-17668316 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 202
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 22, 67

Conread position: 208-462
Cow position: chr29:40166319-40166063 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 140

Conread position: 215-487
Cow position: chr29:26986995-26986722 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 190
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 15, 26

Conread position: 217-466
Cow position: chr29:18735576-18735825 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 9

Conread position: 220-460
Cow position: chr29:27618942-27618701 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 161
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 31

Conread position: 220-466
Cow position: chr29:3100204-3100444 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 26

Conread position: 220-466
Cow position: chr29:20673747-20673987 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 95

Conread position: 226-462
Cow position: chr29:17301589-17301346 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 79, 223

Conread position: 226-466
Cow position: chr29:20910637-20910883 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 84, 51

Conread position: 226-473
Cow position: chr29:15738285-15738535 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 31

Conread position: 226-539
Cow position: chr29:13615594-13615915 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 31

Conread position: 226-543
Cow position: chr29:2071516-2071843 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 188

Conread position: 229-466
Cow position: chr29:36183333-36183091 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 86, 210

Conread position: 230-463
Cow position: chr29:19792225-19792460 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 170, 89

Conread position: 230-521
Cow position: chr29:18211947-18212236 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 165, 34

Conread position: 235-456
Cow position: chr29:3502617-3502392 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 75, 160

Conread position: 235-462
Cow position: chr29:24119694-24119915 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 236-465
Cow position: chr29:21534627-21534861 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 70, 176

Conread position: 240-466
Cow position: chr29:14484496-14484728 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 73, 210

Conread position: 242-536
Cow position: chr29:12004723-12005033 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 223
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 145, 275

Conread position: 245-460
Cow position: chr29:28884123-28883904 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 68

Conread position: 246-415
Cow position: chr29:13062137-13061968 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 26

Conread position: 250-452
Cow position: chr29:3503086-3502885 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 49, 18

Conread position: 254-547
Cow position: chr29:9685970-9686281 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 35, 25

Conread position: 255-420
Cow position: chr29:29558402-29558568 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 108

Conread position: 256-452
Cow position: chr29:39643202-39643004 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 89

Conread position: 258-591
Cow position: chr29:2522588-2522261 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 237
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 196, 54

Conread position: 259-466
Cow position: chr29:2533081-2532879 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 49, 101

Conread position: 260-531
Cow position: chr29:44901682-44901966 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 9, 30

Conread position: 262-466
Cow position: chr29:24345428-24345636 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 60, 86

Conread position: 263-466
Cow position: chr29:32767513-32767703 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 7, 46

Conread position: 265-448
Cow position: chr29:25432414-25432235 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 46, 19

Conread position: 268-440
Cow position: chr29:45384140-45383965 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 268-467
Cow position: chr29:20178121-20178308 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 125, 86

Conread position: 268-467
Cow position: chr29:35738259-35738453 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 127, 73

Conread position: 270-452
Cow position: chr29:456777-456966 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 271-463
Cow position: chr29:43009074-43009264 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 47, 25

Conread position: 276-442
Cow position: chr29:19186745-19186587 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 97

Conread position: 276-452
Cow position: chr29:40615516-40615694 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 126

Conread position: 276-466
Cow position: chr29:11696535-11696351 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 148

Conread position: 276-531
Cow position: chr29:26735034-26734769 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 63

Conread position: 282-530
Cow position: chr29:12798920-12798667 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 127

Conread position: 284-538
Cow position: chr29:3396105-3395841 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 254

Conread position: 304-462
Cow position: chr29:24103572-24103727 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 304-543
Cow position: chr29:45650368-45650617 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 24

Conread position: 307-452
Cow position: chr29:29942757-29942905 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 308-467
Cow position: chr29:44135488-44135647 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 89

Conread position: 309-466
Cow position: chr29:5109234-5109393 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 92, 16

Conread position: 309-538
Cow position: chr29:35636398-35636155 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 28

Conread position: 311-462
Cow position: chr29:8163890-8164039 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 76, 11

Conread position: 313-449
Cow position: chr29:5064444-5064317 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 132, 40

Conread position: 313-520
Cow position: chr29:585242-585029 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 142, 18

Conread position: 313-520
Cow position: chr29:19389454-19389233 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 87, 170

Conread position: 319-466
Cow position: chr29:11684968-11684830 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 323-466
Cow position: chr29:36586535-36586396 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 323-555
Cow position: chr29:4066043-4065802 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 125, 186

Conread position: 324-551
Cow position: chr29:24197689-24197911 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 102, 50

Conread position: 328-466
Cow position: chr29:22714772-22714910 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 338-463
Cow position: chr29:10659396-10659523 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 343-467
Cow position: chr29:4691741-4691865 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 78, 52

Show alignments to all cow chromosomes.