Cow genome map

Conread name: rpldo0136_h2.y1

Conread position: 39-466
Cow position: chr3:78077415-78076985 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 278
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 93

Conread position: 47-456
Cow position: chr3:74754539-74754130 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 270
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 49, 7

Conread position: 61-452
Cow position: chr3:71238360-71237962 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 140

Conread position: 64-279
Cow position: chr3:50350774-50350989 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 52, 7

Conread position: 65-452
Cow position: chr3:18725457-18725829 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 266
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 13, 26

Conread position: 66-416
Cow position: chr3:77582299-77581950 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 23

Conread position: 66-536
Cow position: chr3:30180288-30179793 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 10

Conread position: 67-452
Cow position: chr3:83215465-83215059 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 274
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 11, 0

Conread position: 67-531
Cow position: chr3:53384086-53384569 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 323
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 24, 9

Conread position: 68-517
Cow position: chr3:29596587-29596121 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 317
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 50, 23

Conread position: 69-466
Cow position: chr3:39969660-39970076 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 201

Conread position: 69-521
Cow position: chr3:63180057-63179592 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 310
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 52

Conread position: 71-460
Cow position: chr3:17456069-17456467 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 275
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 45, 20

Conread position: 71-543
Cow position: chr3:48363257-48362786 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 18

Conread position: 72-417
Cow position: chr3:73741699-73742014 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 233
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 158, 46

Conread position: 72-433
Cow position: chr3:3036740-3037101 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 261
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 9, 88

Conread position: 72-435
Cow position: chr3:62046870-62046485 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 266
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 44, 29

Conread position: 72-452
Cow position: chr3:11253973-11254344 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 250
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 14, 53

Conread position: 73-415
Cow position: chr3:24468187-24468536 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 233
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 26

Conread position: 73-437
Cow position: chr3:76922475-76922842 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 247
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 43, 31

Conread position: 73-452
Cow position: chr3:3556737-3556355 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 276
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 39

Conread position: 73-524
Cow position: chr3:75158556-75158086 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 55

Conread position: 73-538
Cow position: chr3:29887240-29887715 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 324
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 31

Conread position: 74-466
Cow position: chr3:29813422-29813039 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 20

Conread position: 75-396
Cow position: chr3:17235018-17235347 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 40, 159

Conread position: 75-442
Cow position: chr3:54506892-54506525 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 252
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 87, 32

Conread position: 75-466
Cow position: chr3:25477979-25477608 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 39

Conread position: 75-467
Cow position: chr3:49131895-49132255 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 266
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 80, 42

Conread position: 75-545
Cow position: chr3:68707830-68708303 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 37

Conread position: 76-374
Cow position: chr3:3656701-3656394 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 209
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 64

Conread position: 76-441
Cow position: chr3:75853140-75853514 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 250
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 15

Conread position: 76-466
Cow position: chr3:74500453-74500020 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 301
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 40, 0

Conread position: 76-524
Cow position: chr3:49482528-49482983 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 303
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 15, 97

Conread position: 76-545
Cow position: chr3:13577034-13577481 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 31

Conread position: 76-563
Cow position: chr3:71231583-71231091 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 37

Conread position: 77-353
Cow position: chr3:75777873-75778157 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 26, 0

Conread position: 77-366
Cow position: chr3:65019669-65019974 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 88, 42

Conread position: 77-466
Cow position: chr3:26066181-26065797 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 25

Conread position: 77-533
Cow position: chr3:15159226-15158753 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 326
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 45, 16

Conread position: 77-537
Cow position: chr3:14465522-14465996 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 332
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 39, 22

Conread position: 77-550
Cow position: chr3:20802448-20802933 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 16

Conread position: 78-462
Cow position: chr3:13301652-13302052 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 276
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 14, 81

Conread position: 78-524
Cow position: chr3:75570264-75570720 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 316
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 40, 13

Conread position: 78-567
Cow position: chr3:52419130-52418642 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 342
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 84, 34

Conread position: 79-316
Cow position: chr3:69650715-69650945 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 55

Conread position: 79-324
Cow position: chr3:56948906-56949151 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 90, 39

Conread position: 79-432
Cow position: chr3:58764904-58765253 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 34

Conread position: 79-434
Cow position: chr3:19793090-19792716 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 43

Conread position: 79-452
Cow position: chr3:83846084-83845710 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 267
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 228, 38

Conread position: 79-462
Cow position: chr3:53738999-53739390 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 65

Conread position: 79-466
Cow position: chr3:50768861-50768474 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 263
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 55

Conread position: 79-466
Cow position: chr3:71496946-71497349 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 280
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 13, 305

Conread position: 79-534
Cow position: chr3:75480180-75479723 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 302
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 54

Conread position: 79-535
Cow position: chr3:6853323-6853790 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 315
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 14

Conread position: 79-536
Cow position: chr3:45882081-45881618 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 54

Conread position: 79-561
Cow position: chr3:27274709-27274222 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 34

Conread position: 79-570
Cow position: chr3:21081198-21081714 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 349
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 146

Conread position: 80-328
Cow position: chr3:39247841-39248093 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 22

Conread position: 80-383
Cow position: chr3:58527564-58527272 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 14

Conread position: 80-399
Cow position: chr3:1517320-1517655 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 28, 270

Conread position: 80-403
Cow position: chr3:17058355-17058689 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 232
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 36, 222

Conread position: 80-453
Cow position: chr3:76267793-76268177 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 260
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 53

Conread position: 80-456
Cow position: chr3:23105174-23105565 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 22

Conread position: 80-466
Cow position: chr3:5374490-5374129 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 27

Conread position: 80-530
Cow position: chr3:65058880-65058417 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 30

Conread position: 80-542
Cow position: chr3:24872886-24872447 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 45

Conread position: 80-546
Cow position: chr3:5365846-5365387 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 37

Conread position: 81-252
Cow position: chr3:53249665-53249500 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 26

Conread position: 81-271
Cow position: chr3:54557846-54557667 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 80, 30

Conread position: 81-278
Cow position: chr3:70402829-70402625 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 35, 176

Conread position: 81-283
Cow position: chr3:27246787-27246983 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 92, 27

Conread position: 81-316
Cow position: chr3:40100549-40100775 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 149, 26

Conread position: 81-335
Cow position: chr3:27976332-27976604 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 79

Conread position: 81-355
Cow position: chr3:3818944-3818697 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 224, 32

Conread position: 81-410
Cow position: chr3:70333789-70334117 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 228
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 90, 30

Conread position: 81-422
Cow position: chr3:4035928-4036241 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 241
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 135, 32

Conread position: 81-430
Cow position: chr3:23920235-23920602 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 251
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 35, 186

Conread position: 81-452
Cow position: chr3:57274239-57273872 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 38

Conread position: 81-458
Cow position: chr3:68880951-68881312 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 41

Conread position: 81-462
Cow position: chr3:23471272-23471668 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 295

Conread position: 81-466
Cow position: chr3:13353544-13353153 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 252
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 75

Conread position: 81-466
Cow position: chr3:53271022-53270622 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 21

Conread position: 81-466
Cow position: chr3:59474300-59473908 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 32

Conread position: 81-466
Cow position: chr3:65969354-65968950 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 273
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 0

Conread position: 81-466
Cow position: chr3:67744461-67744831 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 33

Conread position: 81-466
Cow position: chr3:83491271-83490872 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 183

Conread position: 81-469
Cow position: chr3:9074174-9074532 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 260
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 21

Conread position: 81-510
Cow position: chr3:77188629-77188177 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 293
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 36, 18

Conread position: 81-524
Cow position: chr3:77365112-77365573 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 37

Conread position: 81-527
Cow position: chr3:73764035-73764475 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 40

Conread position: 81-533
Cow position: chr3:54739720-54740159 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 312
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 149, 33

Conread position: 81-534
Cow position: chr3:71247193-71246748 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 315
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 70, 37

Conread position: 81-538
Cow position: chr3:31055833-31056293 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 304
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 90

Conread position: 81-538
Cow position: chr3:53910297-53909823 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 323
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 113, 45

Conread position: 81-538
Cow position: chr3:55124097-55124571 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 16

Conread position: 81-541
Cow position: chr3:1830383-1830857 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 329
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 20, 39

Conread position: 81-545
Cow position: chr3:15057462-15057898 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 304
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 337, 32

Conread position: 81-547
Cow position: chr3:15228650-15229121 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 61

Conread position: 81-557
Cow position: chr3:64172607-64172136 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 30

Conread position: 82-283
Cow position: chr3:75966592-75966805 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 34, 182

Conread position: 82-365
Cow position: chr3:39873529-39873804 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 148, 32

Conread position: 82-366
Cow position: chr3:57704521-57704214 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 208
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 20

Conread position: 82-424
Cow position: chr3:54100534-54100889 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 31, 238

Conread position: 82-433
Cow position: chr3:59035231-59034861 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 244
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 16

Conread position: 82-448
Cow position: chr3:68156906-68156551 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 264
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 43

Conread position: 82-450
Cow position: chr3:12705354-12705738 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 257
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 12, 125

Conread position: 82-452
Cow position: chr3:57634425-57634079 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 144, 29

Conread position: 82-463
Cow position: chr3:76172492-76172865 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 258
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 34, 133

Conread position: 82-466
Cow position: chr3:53240444-53240068 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 276
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 30, 162

Conread position: 82-466
Cow position: chr3:75080942-75080562 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 257
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 34, 112

Conread position: 82-466
Cow position: chr3:76713133-76713526 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 279
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 31, 51

Conread position: 82-467
Cow position: chr3:2518351-2518742 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 265
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 238

Conread position: 82-520
Cow position: chr3:15051773-15052212 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 40

Conread position: 82-537
Cow position: chr3:9641745-9641272 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 98

Conread position: 82-540
Cow position: chr3:65413087-65413570 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 38

Conread position: 82-543
Cow position: chr3:22221505-22221052 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 328
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 79, 31

Conread position: 82-547
Cow position: chr3:31309167-31309656 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 328
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 83, 10

Conread position: 82-591
Cow position: chr3:66884841-66885381 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 373
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 20

Conread position: 83-329
Cow position: chr3:35075060-35074811 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 33, 19

Conread position: 83-411
Cow position: chr3:46541665-46541981 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 147, 23

Conread position: 83-437
Cow position: chr3:70761945-70762302 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 243
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 51

Conread position: 83-442
Cow position: chr3:15751545-15751906 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 256
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 147, 36

Conread position: 83-452
Cow position: chr3:52651886-52652268 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 302

Conread position: 83-460
Cow position: chr3:59366717-59366349 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 250
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 95, 26

Conread position: 83-466
Cow position: chr3:7330950-7331321 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 259
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 19

Conread position: 83-484
Cow position: chr3:22232479-22232882 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 273
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 46

Conread position: 83-521
Cow position: chr3:17134520-17134077 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 297
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 33, 240

Conread position: 83-536
Cow position: chr3:26904277-26903826 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 24

Conread position: 83-536
Cow position: chr3:54781815-54782303 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 335
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 68, 39

Conread position: 83-537
Cow position: chr3:31225610-31225157 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 291
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 54

Conread position: 83-591
Cow position: chr3:57764391-57763898 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 59

Conread position: 84-333
Cow position: chr3:15160703-15160450 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 15

Conread position: 84-410
Cow position: chr3:55177565-55177905 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 227
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 15

Conread position: 84-442
Cow position: chr3:45667166-45667532 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 244
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 89

Conread position: 84-466
Cow position: chr3:53790365-53790745 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 256
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 120, 33

Conread position: 84-524
Cow position: chr3:2675217-2674750 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 21

Conread position: 84-537
Cow position: chr3:18067307-18066842 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 36

Conread position: 84-537
Cow position: chr3:18459349-18459810 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 315
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 73, 42

Conread position: 84-541
Cow position: chr3:18393210-18393676 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 179

Conread position: 85-427
Cow position: chr3:48810462-48810806 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 242
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 28, 103

Conread position: 85-433
Cow position: chr3:19586040-19585687 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 228
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 39

Conread position: 85-463
Cow position: chr3:27696788-27697184 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 272
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 30, 146

Conread position: 85-467
Cow position: chr3:81474179-81473800 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 260
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 77, 32

Conread position: 85-538
Cow position: chr3:55189574-55190041 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 315
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 28, 67

Conread position: 86-416
Cow position: chr3:15153875-15153534 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 258

Conread position: 86-520
Cow position: chr3:32585328-32584883 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 291
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 81, 41

Conread position: 86-535
Cow position: chr3:14553059-14552588 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 212

Conread position: 86-536
Cow position: chr3:37041591-37041138 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 32

Conread position: 86-542
Cow position: chr3:33252706-33253175 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 323
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 30, 230

Conread position: 86-547
Cow position: chr3:28908041-28908497 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 32

Conread position: 87-377
Cow position: chr3:35621480-35621183 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 204
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 9, 64

Conread position: 87-466
Cow position: chr3:4319893-4319506 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 318

Conread position: 87-529
Cow position: chr3:23408180-23408626 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 89-466
Cow position: chr3:64010636-64011022 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 277
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 97, 17

Conread position: 89-521
Cow position: chr3:6873099-6873521 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 315
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 215, 33

Conread position: 91-424
Cow position: chr3:27108717-27109067 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 60

Conread position: 91-456
Cow position: chr3:69750555-69750899 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 251
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 25, 11

Conread position: 91-540
Cow position: chr3:65237204-65236730 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 94-466
Cow position: chr3:73395293-73394912 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 56

Conread position: 95-526
Cow position: chr3:53222189-53221738 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 305
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 21, 110

Conread position: 97-288
Cow position: chr3:77276290-77276487 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 153

Conread position: 97-301
Cow position: chr3:54905780-54905576 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 5

Conread position: 97-452
Cow position: chr3:55318724-55319097 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 5

Conread position: 97-459
Cow position: chr3:37485645-37485979 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 248
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 33

Conread position: 97-466
Cow position: chr3:59391951-59392314 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 246
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 12

Conread position: 97-466
Cow position: chr3:64280763-64281140 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 97-585
Cow position: chr3:74533509-74533015 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 84

Conread position: 99-267
Cow position: chr3:23753657-23753483 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 142

Conread position: 99-302
Cow position: chr3:31804597-31804801 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 17, 99

Conread position: 99-305
Cow position: chr3:11229198-11229411 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 71, 23

Conread position: 99-392
Cow position: chr3:60389925-60389633 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 70

Conread position: 99-402
Cow position: chr3:20993968-20993667 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 17, 61

Conread position: 99-466
Cow position: chr3:2506303-2506685 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 133

Conread position: 99-501
Cow position: chr3:18687074-18686660 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 166

Conread position: 99-539
Cow position: chr3:76138632-76138194 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 299
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 17, 108

Conread position: 99-591
Cow position: chr3:73467799-73467278 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 27

Conread position: 101-515
Cow position: chr3:24353011-24352611 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 59

Conread position: 102-289
Cow position: chr3:28896851-28897049 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 119

Conread position: 102-314
Cow position: chr3:81234558-81234334 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 179

Conread position: 102-320
Cow position: chr3:30357679-30357464 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 64

Conread position: 102-350
Cow position: chr3:14547169-14546909 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 15, 117

Conread position: 102-364
Cow position: chr3:31361593-31361312 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 195
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 14, 195

Conread position: 102-374
Cow position: chr3:3649069-3649334 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 15, 60

Conread position: 102-374
Cow position: chr3:15443556-15443846 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 14, 183

Conread position: 102-377
Cow position: chr3:14194020-14194299 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 76

Conread position: 102-377
Cow position: chr3:15950747-15951031 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 187
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 179

Conread position: 102-442
Cow position: chr3:50614793-50614453 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 62

Conread position: 102-453
Cow position: chr3:36418317-36418660 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 14, 136

Conread position: 102-463
Cow position: chr3:20841709-20842061 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 222

Conread position: 102-463
Cow position: chr3:46005845-46006232 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 156

Conread position: 102-463
Cow position: chr3:52608347-52607982 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 61, 9

Conread position: 102-466
Cow position: chr3:2392799-2393170 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 162

Conread position: 102-467
Cow position: chr3:23091827-23092188 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 47

Conread position: 102-515
Cow position: chr3:44932682-44932246 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 127

Conread position: 102-521
Cow position: chr3:68627528-68627951 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 275
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 16, 31

Conread position: 102-533
Cow position: chr3:60597707-60597263 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 156

Conread position: 102-536
Cow position: chr3:48211655-48211216 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 298
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 59, 11

Conread position: 102-536
Cow position: chr3:48253049-48252606 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 240

Conread position: 102-544
Cow position: chr3:42480765-42480323 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 316
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 14, 50

Conread position: 102-546
Cow position: chr3:70896209-70895748 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 41

Conread position: 103-396
Cow position: chr3:74846556-74846849 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 65

Conread position: 103-536
Cow position: chr3:59597342-59596913 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 171

Conread position: 104-402
Cow position: chr3:35055810-35056125 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 209
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 105-463
Cow position: chr3:35852320-35852669 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 6

Conread position: 106-467
Cow position: chr3:54881922-54881551 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 256
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 101

Conread position: 107-421
Cow position: chr3:81087471-81087785 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 9, 174

Conread position: 108-335
Cow position: chr3:10668717-10668957 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 155

Conread position: 108-394
Cow position: chr3:61116707-61116994 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 8, 54

Conread position: 108-437
Cow position: chr3:80740717-80740389 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 235
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 8, 18

Conread position: 108-533
Cow position: chr3:13329629-13330060 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 130

Conread position: 108-542
Cow position: chr3:68145691-68146118 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 297
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 8, 26

Conread position: 110-422
Cow position: chr3:60264560-60264879 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 211
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 6, 259

Conread position: 111-544
Cow position: chr3:75050462-75050921 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 307
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 133

Conread position: 113-421
Cow position: chr3:84199823-84199515 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 11, 55

Conread position: 113-466
Cow position: chr3:6690153-6689790 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 242
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 37, 87

Conread position: 113-535
Cow position: chr3:34271056-34270639 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 54

Conread position: 114-399
Cow position: chr3:71238631-71238332 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 200
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 138

Conread position: 114-466
Cow position: chr3:67929103-67929472 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 240
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 115-285
Cow position: chr3:28323365-28323191 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 59, 139

Conread position: 115-305
Cow position: chr3:3698799-3698613 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 115-311
Cow position: chr3:74787581-74787380 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 159

Conread position: 115-346
Cow position: chr3:84250394-84250633 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 50, 159

Conread position: 115-357
Cow position: chr3:56483656-56483414 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 101, 46

Conread position: 115-361
Cow position: chr3:75238615-75238354 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 115-369
Cow position: chr3:18059859-18059590 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 48, 235

Conread position: 115-382
Cow position: chr3:11640891-11640604 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 249

Conread position: 115-389
Cow position: chr3:7662012-7661721 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 160

Conread position: 115-391
Cow position: chr3:3889422-3889700 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 57, 82

Conread position: 115-396
Cow position: chr3:78093238-78093522 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 25, 16

Conread position: 115-421
Cow position: chr3:12978460-12978780 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 209
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 115-433
Cow position: chr3:55819904-55819572 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 100, 50

Conread position: 115-441
Cow position: chr3:26739269-26739603 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 216
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 91, 73

Conread position: 115-444
Cow position: chr3:19793435-19793776 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 88

Conread position: 115-452
Cow position: chr3:2199019-2198688 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 47

Conread position: 115-452
Cow position: chr3:16333959-16333612 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 211

Conread position: 115-452
Cow position: chr3:67520021-67520370 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 77

Conread position: 115-460
Cow position: chr3:56612517-56612157 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 237
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 16

Conread position: 115-460
Cow position: chr3:69416623-69416986 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 245
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 53, 154

Conread position: 115-463
Cow position: chr3:38864273-38863916 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 242
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 48, 67

Conread position: 115-463
Cow position: chr3:54435123-54434772 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 112

Conread position: 115-464
Cow position: chr3:3736436-3736082 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 244
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 59

Conread position: 115-464
Cow position: chr3:70334537-70334905 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 333

Conread position: 115-466
Cow position: chr3:11063516-11063174 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 236
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 86

Conread position: 115-466
Cow position: chr3:54903722-54903364 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 241
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 75, 150

Conread position: 115-466
Cow position: chr3:55712586-55712221 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 115-466
Cow position: chr3:57754320-57754688 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 252
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 46, 148

Conread position: 115-466
Cow position: chr3:70354102-70354443 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 239
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 78, 31

Conread position: 115-467
Cow position: chr3:51578169-51578526 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 73

Conread position: 115-467
Cow position: chr3:54340286-54340619 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 242
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 115, 43

Conread position: 115-480
Cow position: chr3:38828906-38828545 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 59, 30

Conread position: 115-520
Cow position: chr3:4050336-4049938 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 47

Conread position: 115-524
Cow position: chr3:8061275-8060854 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 15

Conread position: 115-524
Cow position: chr3:53046503-53046936 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 160

Conread position: 115-524
Cow position: chr3:82055973-82056396 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 300
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 113, 137

Conread position: 115-533
Cow position: chr3:17957616-17957179 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 293
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 92, 147

Conread position: 115-533
Cow position: chr3:48241762-48241333 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 11

Conread position: 115-535
Cow position: chr3:20996847-20997264 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 278
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 190

Conread position: 115-538
Cow position: chr3:72575-72124 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 441

Conread position: 115-538
Cow position: chr3:7566266-7566710 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 309
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 56, 267

Conread position: 115-538
Cow position: chr3:16656330-16656759 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 221

Conread position: 115-538
Cow position: chr3:19711181-19711606 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 294
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 50, 186

Conread position: 115-538
Cow position: chr3:59610564-59611007 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 297
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 45, 237

Conread position: 115-538
Cow position: chr3:68587173-68586747 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 84

Conread position: 115-540
Cow position: chr3:59000608-59001038 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 126

Conread position: 115-543
Cow position: chr3:11987483-11987034 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 284
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 434

Conread position: 115-545
Cow position: chr3:23877154-23876697 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 310
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 50, 5

Conread position: 115-546
Cow position: chr3:53150488-53150028 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 314
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 50, 226

Conread position: 115-555
Cow position: chr3:3985471-3985017 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 141

Conread position: 115-566
Cow position: chr3:29360009-29360455 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 50

Conread position: 116-524
Cow position: chr3:66900572-66901021 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 301
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 49, 259

Conread position: 116-532
Cow position: chr3:8393494-8393059 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 100

Conread position: 116-537
Cow position: chr3:3032563-3032106 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 311
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 54, 166

Conread position: 117-286
Cow position: chr3:57846797-57846957 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 117-466
Cow position: chr3:45647819-45647472 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 13, 59

Conread position: 117-470
Cow position: chr3:49337871-49337519 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 241
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 122

Conread position: 118-506
Cow position: chr3:51233952-51234357 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 136

Conread position: 121-324
Cow position: chr3:11716130-11715934 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 109, 42

Conread position: 121-538
Cow position: chr3:2630912-2630507 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 280
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 109, 60

Conread position: 122-446
Cow position: chr3:61322971-61322660 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 220
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 11, 39

Conread position: 122-524
Cow position: chr3:55010023-55010434 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 75

Conread position: 123-401
Cow position: chr3:73299215-73298944 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 103, 46

Conread position: 123-524
Cow position: chr3:44102114-44101702 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 200

Conread position: 124-466
Cow position: chr3:72391234-72390876 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 212

Conread position: 124-467
Cow position: chr3:26970959-26970620 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 39, 18

Conread position: 124-467
Cow position: chr3:54946270-54945919 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 26

Conread position: 125-466
Cow position: chr3:22734113-22734479 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 249
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 41, 180

Conread position: 125-536
Cow position: chr3:54960311-54959900 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 297
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 49, 97

Conread position: 132-439
Cow position: chr3:26982196-26981883 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 48, 178

Conread position: 132-472
Cow position: chr3:14599067-14598737 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 104

Conread position: 132-550
Cow position: chr3:45648251-45647831 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 291
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 99, 30

Conread position: 132-571
Cow position: chr3:14601565-14602040 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 404

Conread position: 134-317
Cow position: chr3:53904580-53904399 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 54

Conread position: 135-324
Cow position: chr3:56704196-56704387 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 12

Conread position: 136-510
Cow position: chr3:73709181-73708785 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 61

Conread position: 140-311
Cow position: chr3:10026570-10026737 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 111

Conread position: 141-487
Cow position: chr3:58767385-58767037 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 15, 224

Conread position: 142-462
Cow position: chr3:80565092-80564759 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 234
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 23, 159

Conread position: 144-377
Cow position: chr3:10104159-10103928 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 103

Conread position: 145-443
Cow position: chr3:20677724-20678020 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 29, 110

Conread position: 148-487
Cow position: chr3:116306-115965 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 236
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 102

Conread position: 150-538
Cow position: chr3:66707955-66708366 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 70

Conread position: 150-541
Cow position: chr3:77271166-77271564 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 93

Conread position: 150-560
Cow position: chr3:8394053-8393625 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 282

Conread position: 151-447
Cow position: chr3:34669621-34669917 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 104

Conread position: 152-388
Cow position: chr3:72503789-72504029 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 78, 17

Conread position: 152-467
Cow position: chr3:53113286-53112964 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 109

Conread position: 152-467
Cow position: chr3:53538619-53538319 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 214
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 8

Conread position: 152-545
Cow position: chr3:74561314-74561682 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 267
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 48

Conread position: 153-424
Cow position: chr3:30222300-30222019 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 12, 0

Conread position: 153-443
Cow position: chr3:53318507-53318218 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 77, 16

Conread position: 153-533
Cow position: chr3:52863077-52863471 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 16

Conread position: 156-465
Cow position: chr3:54862316-54862625 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 158, 12

Conread position: 158-462
Cow position: chr3:48296801-48296509 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 72, 95

Conread position: 158-467
Cow position: chr3:23111411-23111710 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 216
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 66, 40

Conread position: 158-524
Cow position: chr3:39171385-39171763 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 265
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 61, 37

Conread position: 158-541
Cow position: chr3:53588283-53588684 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 12

Conread position: 160-466
Cow position: chr3:52017872-52017553 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 210
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 282

Conread position: 160-466
Cow position: chr3:71135887-71135584 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 6

Conread position: 161-309
Cow position: chr3:21642087-21641938 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 91

Conread position: 161-329
Cow position: chr3:61467089-61467264 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 161-366
Cow position: chr3:55984198-55983986 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 94

Conread position: 161-374
Cow position: chr3:58317848-58318070 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 63, 92

Conread position: 161-391
Cow position: chr3:84175722-84175959 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 19, 95

Conread position: 161-398
Cow position: chr3:32457293-32457060 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 40

Conread position: 161-399
Cow position: chr3:43727169-43726936 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 148, 8

Conread position: 161-441
Cow position: chr3:59883968-59884255 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 12, 271

Conread position: 161-441
Cow position: chr3:84596866-84597143 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 126, 19

Conread position: 161-447
Cow position: chr3:67930085-67930371 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 93

Conread position: 161-449
Cow position: chr3:63269323-63269034 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 26

Conread position: 161-452
Cow position: chr3:17447515-17447802 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 69, 92

Conread position: 161-452
Cow position: chr3:59621548-59621832 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 69, 91

Conread position: 161-453
Cow position: chr3:76387510-76387791 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 69, 20

Conread position: 161-466
Cow position: chr3:12711815-12712127 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 161-517
Cow position: chr3:70899990-70899628 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 245
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 44

Conread position: 161-522
Cow position: chr3:81470994-81471377 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 261
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 13, 180

Conread position: 161-525
Cow position: chr3:57624566-57624183 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 223

Conread position: 161-536
Cow position: chr3:80053442-80053825 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 38

Conread position: 161-536
Cow position: chr3:82461279-82460892 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 271

Conread position: 161-538
Cow position: chr3:49218205-49218598 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 27

Conread position: 161-538
Cow position: chr3:70401996-70401612 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 89

Conread position: 161-541
Cow position: chr3:67704646-67704244 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 277
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 58, 280

Conread position: 162-452
Cow position: chr3:74134805-74134511 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 214
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 12, 207

Conread position: 162-467
Cow position: chr3:55970605-55970299 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 68, 31

Conread position: 163-314
Cow position: chr3:11606418-11606259 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 164-545
Cow position: chr3:58865379-58865761 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 262
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 210, 7

Conread position: 165-534
Cow position: chr3:66375415-66375032 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 266
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 44, 24

Conread position: 166-368
Cow position: chr3:27727737-27727940 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 25

Conread position: 166-417
Cow position: chr3:79645333-79645603 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 8, 216

Conread position: 166-439
Cow position: chr3:61169894-61169620 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 75

Conread position: 166-456
Cow position: chr3:15752541-15752827 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 58, 84

Conread position: 166-460
Cow position: chr3:49790717-49791011 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 64, 87

Conread position: 166-466
Cow position: chr3:58540427-58540737 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 162

Conread position: 166-520
Cow position: chr3:61323426-61323077 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 240
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 71, 115

Conread position: 166-524
Cow position: chr3:38691311-38691684 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 262

Conread position: 166-531
Cow position: chr3:59630418-59630786 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 100

Conread position: 166-534
Cow position: chr3:17895942-17895567 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 14

Conread position: 166-536
Cow position: chr3:33632813-33633177 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 259
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 33

Conread position: 166-546
Cow position: chr3:17934844-17935225 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 14

Conread position: 167-340
Cow position: chr3:53703870-53704049 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 63, 24

Conread position: 167-437
Cow position: chr3:49139943-49140221 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 40, 0

Conread position: 167-442
Cow position: chr3:60265160-60265426 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 63, 86

Conread position: 167-452
Cow position: chr3:66883851-66884135 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 63, 26

Conread position: 167-463
Cow position: chr3:26921002-26920695 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 47, 12

Conread position: 167-546
Cow position: chr3:5100678-5101058 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 148

Conread position: 169-466
Cow position: chr3:15192671-15192360 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 223
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 44, 11

Conread position: 170-524
Cow position: chr3:32596854-32597207 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 254
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 28

Conread position: 170-534
Cow position: chr3:7678744-7678384 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 262
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 56, 66

Conread position: 170-536
Cow position: chr3:12255569-12255189 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 257
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 137, 49

Conread position: 170-578
Cow position: chr3:36100925-36100499 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 296
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 60, 33

Conread position: 171-424
Cow position: chr3:26874680-26874424 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 82

Conread position: 171-462
Cow position: chr3:61278997-61278706 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 55, 16

Conread position: 171-463
Cow position: chr3:26218964-26219263 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 43, 9

Conread position: 171-466
Cow position: chr3:36671905-36672207 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 200
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 81

Conread position: 171-467
Cow position: chr3:61144184-61143888 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 80

Conread position: 171-472
Cow position: chr3:80072219-80071911 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 59, 295

Conread position: 171-531
Cow position: chr3:59588600-59588233 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 250
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 55, 91

Conread position: 171-535
Cow position: chr3:70565648-70566026 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 253
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 59, 82

Conread position: 171-536
Cow position: chr3:37599338-37599707 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 246
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 59, 207

Conread position: 172-345
Cow position: chr3:74900554-74900726 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 26

Conread position: 172-399
Cow position: chr3:73820282-73820511 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 58, 18

Conread position: 172-418
Cow position: chr3:58973384-58973143 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 44, 15

Conread position: 172-445
Cow position: chr3:5366857-5366585 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 58, 73

Conread position: 172-452
Cow position: chr3:27940054-27940322 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 44, 80

Conread position: 172-458
Cow position: chr3:26960499-26960791 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 35, 0

Conread position: 172-466
Cow position: chr3:2680602-2680307 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 202
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 58, 81

Conread position: 172-466
Cow position: chr3:78945750-78946041 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 225
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 42, 83

Conread position: 172-466
Cow position: chr3:83815700-83815997 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 51, 15

Conread position: 172-527
Cow position: chr3:75045787-75046153 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 258
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 40, 81

Conread position: 172-533
Cow position: chr3:57760587-57760232 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 273

Conread position: 172-533
Cow position: chr3:80581744-80581383 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 79

Conread position: 172-539
Cow position: chr3:73443007-73443379 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 259
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 146, 47

Conread position: 172-541
Cow position: chr3:53091576-53091227 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 255
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 97, 26

Conread position: 172-543
Cow position: chr3:42423239-42423628 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 259
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 58, 69

Conread position: 172-562
Cow position: chr3:62292037-62292433 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 278
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 109, 47

Conread position: 173-373
Cow position: chr3:33693907-33693702 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 57, 125

Conread position: 173-460
Cow position: chr3:67543781-67544071 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 194
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 34

Conread position: 173-466
Cow position: chr3:49650476-49650175 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 57, 0

Conread position: 173-531
Cow position: chr3:66292088-66292464 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 255
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 57, 169

Conread position: 174-462
Cow position: chr3:38347276-38347001 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 212
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 56, 13

Conread position: 174-537
Cow position: chr3:14626063-14626442 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 260
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 56, 342

Conread position: 178-490
Cow position: chr3:10896904-10896599 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 10

Conread position: 179-413
Cow position: chr3:24935446-24935215 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 51, 12

Conread position: 179-443
Cow position: chr3:74502243-74502507 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 51, 151

Conread position: 179-487
Cow position: chr3:25755102-25754794 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 210
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 87

Conread position: 179-536
Cow position: chr3:49383031-49382661 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 247
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 193

Conread position: 179-554
Cow position: chr3:48629507-48629894 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 248
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 46, 40

Conread position: 180-466
Cow position: chr3:55835740-55836033 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 73

Conread position: 180-467
Cow position: chr3:62826538-62826828 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 50, 144

Conread position: 180-533
Cow position: chr3:5097288-5096915 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 265

Conread position: 180-541
Cow position: chr3:55271964-55272337 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 252
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 50, 235

Conread position: 180-558
Cow position: chr3:56059892-56059495 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 271
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 50, 386

Conread position: 181-414
Cow position: chr3:32183940-32184177 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 43

Conread position: 181-465
Cow position: chr3:31907064-31907349 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 18

Conread position: 181-470
Cow position: chr3:71430125-71430420 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 14

Conread position: 181-524
Cow position: chr3:61840355-61840010 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 85

Conread position: 181-534
Cow position: chr3:79292908-79292545 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 66

Conread position: 181-571
Cow position: chr3:4032043-4031642 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 63

Conread position: 182-466
Cow position: chr3:11712045-11711748 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 182-540
Cow position: chr3:28898146-28898519 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 262
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 42, 9

Conread position: 184-437
Cow position: chr3:76015368-76015114 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 40, 9

Conread position: 184-533
Cow position: chr3:56300-56657 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 46, 87

Conread position: 184-539
Cow position: chr3:50069840-50069488 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 46, 95

Conread position: 184-545
Cow position: chr3:58968826-58969192 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 141

Conread position: 186-463
Cow position: chr3:7940482-7940757 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 130, 62

Conread position: 186-547
Cow position: chr3:12674968-12675340 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 256
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 73

Conread position: 187-463
Cow position: chr3:3638252-3637981 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 64

Conread position: 187-544
Cow position: chr3:72676165-72675791 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 359

Conread position: 188-467
Cow position: chr3:62884275-62883998 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 37, 10

Conread position: 188-538
Cow position: chr3:12287295-12286944 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 264
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 121, 40

Conread position: 190-447
Cow position: chr3:23444817-23445083 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 40, 62

Conread position: 190-542
Cow position: chr3:75711377-75711022 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 246
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 40, 116

Conread position: 190-543
Cow position: chr3:26553644-26554006 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 26, 98

Conread position: 191-467
Cow position: chr3:27545749-27546041 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 107

Conread position: 191-533
Cow position: chr3:80468608-80468937 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 237
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 37, 28

Conread position: 191-538
Cow position: chr3:46901268-46900904 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 263
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 35, 86

Conread position: 192-390
Cow position: chr3:22510094-22509894 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 106, 100

Conread position: 192-530
Cow position: chr3:34556171-34556506 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 240
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 59

Conread position: 193-535
Cow position: chr3:20437588-20437935 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 37, 124

Conread position: 194-452
Cow position: chr3:78896714-78896455 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 36, 157

Conread position: 195-466
Cow position: chr3:49460860-49461141 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 195-538
Cow position: chr3:31771747-31771409 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 33, 11

Conread position: 196-466
Cow position: chr3:61539866-61539592 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 49

Conread position: 198-466
Cow position: chr3:73759454-73759724 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 50

Conread position: 200-521
Cow position: chr3:75057075-75057390 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 222
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 113, 65

Conread position: 201-467
Cow position: chr3:55778096-55777828 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 29, 18

Conread position: 202-437
Cow position: chr3:81359048-81359292 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 137

Conread position: 202-510
Cow position: chr3:72019175-72018854 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 226
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 65

Conread position: 202-569
Cow position: chr3:81277640-81278025 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 253
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 33, 345

Conread position: 203-452
Cow position: chr3:74878531-74878784 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 27, 230

Conread position: 205-462
Cow position: chr3:34937900-34937640 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 25, 47

Conread position: 207-458
Cow position: chr3:67698330-67698079 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 46

Conread position: 207-535
Cow position: chr3:66609790-66610126 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 45

Conread position: 208-451
Cow position: chr3:13890530-13890274 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 63

Conread position: 208-474
Cow position: chr3:5044760-5045022 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 22, 63

Conread position: 208-538
Cow position: chr3:31046899-31047233 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 227
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 64

Conread position: 213-462
Cow position: chr3:83921230-83920998 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 188, 36

Conread position: 219-474
Cow position: chr3:55947622-55947362 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 91, 13

Conread position: 220-456
Cow position: chr3:22820612-22820370 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 10, 22

Conread position: 220-466
Cow position: chr3:4457030-4457280 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 168
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 10, 174

Conread position: 220-466
Cow position: chr3:53592648-53592905 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 85

Conread position: 220-466
Cow position: chr3:83727210-83727455 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 39

Conread position: 220-524
Cow position: chr3:79220899-79220570 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 226
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 48

Conread position: 220-536
Cow position: chr3:24548796-24549123 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 215
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 10, 51

Conread position: 222-465
Cow position: chr3:53094892-53095143 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 37

Conread position: 223-534
Cow position: chr3:43528196-43528528 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 242
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 24, 168

Conread position: 224-466
Cow position: chr3:35005811-35005573 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 91, 0

Conread position: 225-421
Cow position: chr3:15992752-15992551 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 93, 0

Conread position: 225-467
Cow position: chr3:48371168-48370926 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 160
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 120, 88

Conread position: 226-452
Cow position: chr3:14632950-14633178 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 84, 156

Conread position: 226-455
Cow position: chr3:36446685-36446914 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 84, 153

Conread position: 226-540
Cow position: chr3:10347384-10347059 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 218
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 232, 32

Conread position: 226-557
Cow position: chr3:19708075-19708410 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 38

Conread position: 228-466
Cow position: chr3:42178184-42177954 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 184
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 83, 36

Conread position: 229-466
Cow position: chr3:46350700-46350455 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 80, 22

Conread position: 229-543
Cow position: chr3:33698761-33698424 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 24, 40

Conread position: 229-565
Cow position: chr3:69849481-69849819 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 244
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 108, 35

Conread position: 240-538
Cow position: chr3:2036321-2036007 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 214
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 6, 266

Conread position: 243-467
Cow position: chr3:52650511-52650738 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 19, 200

Conread position: 246-466
Cow position: chr3:9843602-9843379 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 176
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 7, 107

Conread position: 247-545
Cow position: chr3:77449071-77448772 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 208
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 72

Conread position: 249-466
Cow position: chr3:56301339-56301552 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 24, 44

Conread position: 251-534
Cow position: chr3:59515113-59514820 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 18, 99

Conread position: 254-466
Cow position: chr3:29807473-29807258 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 8, 176

Conread position: 254-466
Cow position: chr3:65800598-65800389 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 171
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 82

Conread position: 254-466
Cow position: chr3:77496832-77496613 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 17

Conread position: 254-499
Cow position: chr3:41328451-41328201 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 56

Conread position: 255-452
Cow position: chr3:66866392-66866594 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 22, 40

Conread position: 255-465
Cow position: chr3:77227329-77227115 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 54, 0

Conread position: 255-533
Cow position: chr3:27544329-27544617 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 11, 122

Conread position: 256-467
Cow position: chr3:56703847-56704059 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 124

Conread position: 256-516
Cow position: chr3:84000617-84000341 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 13, 0

Conread position: 256-521
Cow position: chr3:39328404-39328136 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 175

Conread position: 258-462
Cow position: chr3:15859665-15859871 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 34

Conread position: 258-466
Cow position: chr3:5416218-5416435 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 87

Conread position: 258-466
Cow position: chr3:49231019-49230806 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 19

Conread position: 258-535
Cow position: chr3:8147666-8147951 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 248

Conread position: 262-540
Cow position: chr3:30701306-30701026 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 9

Conread position: 266-420
Cow position: chr3:27247196-27247351 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 52, 152

Conread position: 267-522
Cow position: chr3:47284828-47284561 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 41, 77

Conread position: 268-417
Cow position: chr3:18056430-18056284 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 268-431
Cow position: chr3:15232022-15231857 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 268-444
Cow position: chr3:75687446-75687625 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 268-479
Cow position: chr3:25060071-25059854 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 169
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 42, 0

Conread position: 268-535
Cow position: chr3:69961724-69961999 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 15, 68

Conread position: 268-538
Cow position: chr3:11020109-11019827 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 132, 40

Conread position: 268-538
Cow position: chr3:57553857-57554138 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 213
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 21

Conread position: 268-555
Cow position: chr3:44622895-44623206 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 20, 27

Conread position: 268-565
Cow position: chr3:51506963-51506679 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 101, 39

Conread position: 269-460
Cow position: chr3:14725292-14725099 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 269-510
Cow position: chr3:7365898-7366142 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 183, 46

Conread position: 270-444
Cow position: chr3:44534770-44534953 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 22

Conread position: 270-447
Cow position: chr3:83707984-83708157 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 84

Conread position: 270-451
Cow position: chr3:8790605-8790784 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 270-452
Cow position: chr3:61024312-61024498 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 37, 143

Conread position: 270-452
Cow position: chr3:73590005-73590193 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 270-458
Cow position: chr3:3164506-3164696 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 270-459
Cow position: chr3:21050848-21051040 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 186

Conread position: 270-461
Cow position: chr3:81940247-81940052 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 270-463
Cow position: chr3:81401323-81401507 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 270-466
Cow position: chr3:27286218-27286021 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 129, 16

Conread position: 270-467
Cow position: chr3:19789125-19789324 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 147

Conread position: 270-530
Cow position: chr3:59271532-59271274 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 125

Conread position: 270-530
Cow position: chr3:82657098-82657370 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 41, 26

Conread position: 270-536
Cow position: chr3:41366991-41367274 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 209
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 43, 136

Conread position: 270-546
Cow position: chr3:24304926-24305203 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 40, 163

Conread position: 271-524
Cow position: chr3:49731651-49731916 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 148

Conread position: 274-464
Cow position: chr3:58158488-58158669 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 37

Conread position: 275-447
Cow position: chr3:27212348-27212173 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 39, 155

Conread position: 276-466
Cow position: chr3:55062888-55063072 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 119, 37

Conread position: 276-503
Cow position: chr3:28692446-28692688 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 181
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 66

Conread position: 276-543
Cow position: chr3:45313033-45312755 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 16

Conread position: 277-452
Cow position: chr3:4087177-4087360 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 165

Conread position: 280-546
Cow position: chr3:17952637-17952358 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 262

Conread position: 282-452
Cow position: chr3:8604041-8604208 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 283-467
Cow position: chr3:45307912-45307729 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 30, 97

Conread position: 286-555
Cow position: chr3:22924437-22924696 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 57

Conread position: 287-524
Cow position: chr3:22171155-22170910 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 25

Conread position: 292-466
Cow position: chr3:25691718-25691545 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 92, 16

Conread position: 292-487
Cow position: chr3:11292502-11292693 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 168, 74

Conread position: 293-466
Cow position: chr3:25945045-25944873 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 106, 15

Conread position: 293-534
Cow position: chr3:4223277-4223028 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 159, 25

Conread position: 296-458
Cow position: chr3:75727621-75727785 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 298-543
Cow position: chr3:15661740-15661998 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 92, 128

Conread position: 305-437
Cow position: chr3:78739807-78739676 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 121, 10

Conread position: 305-466
Cow position: chr3:59206198-59206036 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 308-447
Cow position: chr3:61361354-61361214 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 91, 17

Conread position: 308-530
Cow position: chr3:46160896-46161130 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 32

Conread position: 308-536
Cow position: chr3:31903164-31903399 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 79, 61

Conread position: 310-460
Cow position: chr3:7858316-7858160 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 310-466
Cow position: chr3:59885335-59885180 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 66, 88

Conread position: 313-466
Cow position: chr3:8717195-8717041 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 86, 11

Conread position: 313-466
Cow position: chr3:74088226-74088378 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 12

Conread position: 313-533
Cow position: chr3:66116166-66116400 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 313-545
Cow position: chr3:58174851-58174613 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 50, 221

Conread position: 314-426
Cow position: chr3:11715713-11715597 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 314-439
Cow position: chr3:16891242-16891117 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 65

Conread position: 315-524
Cow position: chr3:42588299-42588070 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 10

Conread position: 315-536
Cow position: chr3:2483389-2483162 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 26

Conread position: 316-463
Cow position: chr3:79591940-79592090 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 316-546
Cow position: chr3:22872105-22872352 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 59, 240

Conread position: 319-466
Cow position: chr3:35283151-35283302 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 319-470
Cow position: chr3:31298214-31298368 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 319-519
Cow position: chr3:30055508-30055720 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 82, 27

Conread position: 319-538
Cow position: chr3:20129884-20129650 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 224

Conread position: 319-543
Cow position: chr3:34316019-34316262 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 322-463
Cow position: chr3:79208062-79208204 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 79, 37

Conread position: 324-461
Cow position: chr3:83396130-83395993 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 324-466
Cow position: chr3:16547610-16547472 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 324-555
Cow position: chr3:43657774-43658004 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 188, 51

Conread position: 325-461
Cow position: chr3:35074614-35074480 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 325-501
Cow position: chr3:23270031-23269846 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 325-546
Cow position: chr3:56704611-56704838 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 122, 225

Conread position: 328-466
Cow position: chr3:55117035-55117176 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 328-466
Cow position: chr3:61857433-61857292 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 328-529
Cow position: chr3:58383896-58383684 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 126, 34

Conread position: 330-545
Cow position: chr3:18855023-18854795 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 69, 211

Conread position: 333-574
Cow position: chr3:51609746-51609488 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 62, 232

Conread position: 337-463
Cow position: chr3:6265433-6265306 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 341-466
Cow position: chr3:43916301-43916425 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 344-464
Cow position: chr3:33797089-33797208 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 347-466
Cow position: chr3:5082727-5082846 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.