Cow genome map
| Conread name: | rpliv0115_k8.y1 |
| Conread position: | 3-343 |
| Cow position: | chr13:56292131-56291790 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 149, 132 |
| Conread position: | 3-347 |
| Cow position: | chr13:56317935-56318285 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 74, 61 |
| Conread position: | 3-435 |
| Cow position: | chr13:39984471-39984903 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 57 |
| Conread position: | 3-441 |
| Cow position: | chr13:39984303-39984741 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-441 |
| Cow position: | chr13:39984387-39984825 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-364 |
| Cow position: | chr13:56333952-56334321 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 57, 65 |
| Conread position: | 4-395 |
| Cow position: | chr13:56317331-56317714 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 4-441 |
| Cow position: | chr13:39984136-39984573 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 82 |
| Conread position: | 4-441 |
| Cow position: | chr13:56333532-56333969 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 273 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 163, 151 |
| Conread position: | 4-441 |
| Cow position: | chr13:56333700-56334146 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 285 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 140, 150 |
| Conread position: | 5-382 |
| Cow position: | chr13:56292712-56292335 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 146, 192 |
| Conread position: | 6-432 |
| Cow position: | chr13:56333870-56334305 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 0 |
| Conread position: | 6-441 |
| Cow position: | chr13:56333618-56334053 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 61 |
| Conread position: | 7-441 |
| Cow position: | chr13:39984055-39984489 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-441 |
| Cow position: | chr13:39984223-39984657 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-441 |
| Cow position: | chr13:39983721-39984153 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 267 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 68, 51 |
| Conread position: | 20-346 |
| Cow position: | chr13:56317509-56317833 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 280, 155 |
| Conread position: | 21-427 |
| Cow position: | chr13:56292194-56291790 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 36 |
| Conread position: | 22-441 |
| Cow position: | chr13:39983902-39984321 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 31-441 |
| Cow position: | chr13:56292434-56292029 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 38 |
| Conread position: | 32-422 |
| Cow position: | chr13:56292848-56292463 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 257 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 57-441 |
| Cow position: | chr13:56333501-56333885 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 193, 182 |
| Conread position: | 68-440 |
| Cow position: | chr13:56292307-56291946 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 79, 91 |
| Conread position: | 81-433 |
| Cow position: | chr13:56317929-56318287 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 239, 230 |
| Conread position: | 90-434 |
| Cow position: | chr13:39983886-39984230 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 40, 47 |
| Conread position: | 111-440 |
| Cow position: | chr13:56292853-56292528 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 13, 27 |
| Conread position: | 113-441 |
| Cow position: | chr13:56317356-56317676 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 116, 0 |
Show alignments to all cow chromosomes.