Cow genome map

Conread name: rpliv0115_k8.y1

Conread position: 1-214
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 182, 0

Conread position: 2-441
Cow position:
Alignm length: 441
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 317

Conread position: 2-441
Cow position:
Alignm length: 444
Alignm identity: 274
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 94, 85

Conread position: 3-307
Cow position:
Alignm length: 310
Alignm identity: 198
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 51, 66

Conread position: 3-310
Cow position:
Alignm length: 310
Alignm identity: 198
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 62

Conread position: 3-350
Cow position:
Alignm length: 350
Alignm identity: 215
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 84, 90

Conread position: 3-359
Cow position:
Alignm length: 358
Alignm identity: 230
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 154

Conread position: 3-382
Cow position:
Alignm length: 381
Alignm identity: 240
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 51, 62

Conread position: 3-388
Cow position:
Alignm length: 389
Alignm identity: 248
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 235, 244

Conread position: 3-391
Cow position:
Alignm length: 394
Alignm identity: 266
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 298, 225

Conread position: 3-394
Cow position:
Alignm length: 392
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-395
Cow position:
Alignm length: 394
Alignm identity: 254
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 80, 75

Conread position: 3-395
Cow position:
Alignm length: 395
Alignm identity: 258
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 249, 236

Conread position: 3-398
Cow position:
Alignm length: 401
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 64

Conread position: 3-424
Cow position:
Alignm length: 424
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 77

Conread position: 3-431
Cow position:
Alignm length: 430
Alignm identity: 275
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 163, 159

Conread position: 3-436
Cow position:
Alignm length: 434
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-437
Cow position:
Alignm length: 438
Alignm identity: 264
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 59

Conread position: 3-437
Cow position:
Alignm length: 435
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-437
Cow position:
Alignm length: 437
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 64

Conread position: 3-437
Cow position:
Alignm length: 435
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-437
Cow position:
Alignm length: 438
Alignm identity: 271
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 127, 153

Conread position: 3-439
Cow position:
Alignm length: 438
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 154

Conread position: 3-439
Cow position:
Alignm length: 440
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 64

Conread position: 3-440
Cow position:
Alignm length: 438
Alignm identity: 272
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 3-440
Cow position:
Alignm length: 438
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-440
Cow position:
Alignm length: 438
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-440
Cow position:
Alignm length: 440
Alignm identity: 279
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 49, 63

Conread position: 3-440
Cow position:
Alignm length: 440
Alignm identity: 277
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 141, 164

Conread position: 3-440
Cow position:
Alignm length: 440
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 164

Conread position: 3-441
Cow position:
Alignm length: 441
Alignm identity: 272
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 80, 75

Conread position: 3-441
Cow position:
Alignm length: 442
Alignm identity: 274
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 82, 90

Conread position: 3-441
Cow position:
Alignm length: 441
Alignm identity: 280
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 143, 156

Conread position: 3-441
Cow position:
Alignm length: 440
Alignm identity: 279
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 51, 70

Conread position: 3-441
Cow position:
Alignm length: 439
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-441
Cow position:
Alignm length: 439
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-441
Cow position:
Alignm length: 439
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-441
Cow position:
Alignm length: 439
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-441
Cow position:
Alignm length: 440
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 381

Conread position: 3-441
Cow position:
Alignm length: 440
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 82

Conread position: 3-441
Cow position:
Alignm length: 439
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-441
Cow position:
Alignm length: 439
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-441
Cow position:
Alignm length: 441
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 142

Conread position: 3-441
Cow position:
Alignm length: 443
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 57

Conread position: 3-441
Cow position:
Alignm length: 439
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-441
Cow position:
Alignm length: 441
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 242

Conread position: 3-441
Cow position:
Alignm length: 441
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 158

Conread position: 3-441
Cow position:
Alignm length: 442
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 36

Conread position: 3-441
Cow position:
Alignm length: 440
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 60

Conread position: 3-441
Cow position:
Alignm length: 443
Alignm identity: 267
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 161, 142

Conread position: 4-392
Cow position:
Alignm length: 391
Alignm identity: 246
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 247, 241

Conread position: 4-411
Cow position:
Alignm length: 411
Alignm identity: 265
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 50, 65

Conread position: 4-431
Cow position:
Alignm length: 429
Alignm identity: 264
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 411, 402

Conread position: 4-440
Cow position:
Alignm length: 438
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 60

Conread position: 4-440
Cow position:
Alignm length: 437
Alignm identity: 276
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 4-441
Cow position:
Alignm length: 441
Alignm identity: 268
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 22, 62

Conread position: 4-441
Cow position:
Alignm length: 439
Alignm identity: 274
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 118, 127

Conread position: 4-441
Cow position:
Alignm length: 440
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 61

Conread position: 4-441
Cow position:
Alignm length: 440
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 65

Conread position: 4-441
Cow position:
Alignm length: 440
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 65

Conread position: 4-441
Cow position:
Alignm length: 440
Alignm identity: 270
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 247, 235

Conread position: 5-395
Cow position:
Alignm length: 394
Alignm identity: 241
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 48, 65

Conread position: 5-440
Cow position:
Alignm length: 438
Alignm identity: 273
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 78, 73

Conread position: 5-440
Cow position:
Alignm length: 437
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 240

Conread position: 5-440
Cow position:
Alignm length: 442
Alignm identity: 288
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 49, 61

Conread position: 5-441
Cow position:
Alignm length: 441
Alignm identity: 270
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 69, 56

Conread position: 5-441
Cow position:
Alignm length: 441
Alignm identity: 278
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 47, 60

Conread position: 6-384
Cow position:
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 232

Conread position: 6-440
Cow position:
Alignm length: 436
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 61

Conread position: 6-441
Cow position:
Alignm length: 436
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-441
Cow position:
Alignm length: 436
Alignm identity: 269
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 6-441
Cow position:
Alignm length: 438
Alignm identity: 275
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 47, 59

Conread position: 6-441
Cow position:
Alignm length: 439
Alignm identity: 281
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 5, 315

Conread position: 7-437
Cow position:
Alignm length: 434
Alignm identity: 260
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 139, 152

Conread position: 7-441
Cow position:
Alignm length: 437
Alignm identity: 261
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 154, 147

Conread position: 7-441
Cow position:
Alignm length: 437
Alignm identity: 278
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 75, 71

Conread position: 7-441
Cow position:
Alignm length: 440
Alignm identity: 286
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 46, 58

Conread position: 7-441
Cow position:
Alignm length: 436
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 0

Conread position: 7-441
Cow position:
Alignm length: 436
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 63

Conread position: 7-441
Cow position:
Alignm length: 436
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 317

Conread position: 7-441
Cow position:
Alignm length: 438
Alignm identity: 261
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 106, 80

Conread position: 7-441
Cow position:
Alignm length: 437
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 152

Conread position: 7-441
Cow position:
Alignm length: 438
Alignm identity: 271
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 161, 151

Conread position: 9-392
Cow position:
Alignm length: 388
Alignm identity: 236
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 56

Conread position: 10-366
Cow position:
Alignm length: 358
Alignm identity: 228
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 234, 240

Conread position: 10-392
Cow position:
Alignm length: 387
Alignm identity: 236
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 39, 55

Conread position: 10-393
Cow position:
Alignm length: 385
Alignm identity: 244
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 308, 301

Conread position: 10-395
Cow position:
Alignm length: 389
Alignm identity: 238
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 82

Conread position: 10-437
Cow position:
Alignm length: 428
Alignm identity: 265
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 10-437
Cow position:
Alignm length: 428
Alignm identity: 267
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 10-437
Cow position:
Alignm length: 428
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-440
Cow position:
Alignm length: 433
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 55

Conread position: 10-440
Cow position:
Alignm length: 432
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 55

Conread position: 10-441
Cow position:
Alignm length: 434
Alignm identity: 274
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 387, 394

Conread position: 10-441
Cow position:
Alignm length: 436
Alignm identity: 265
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 39

Conread position: 10-441
Cow position:
Alignm length: 434
Alignm identity: 275
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 42, 55

Conread position: 10-441
Cow position:
Alignm length: 432
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-441
Cow position:
Alignm length: 433
Alignm identity: 260
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 54

Conread position: 10-441
Cow position:
Alignm length: 437
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 55

Conread position: 12-366
Cow position:
Alignm length: 359
Alignm identity: 220
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 72, 66

Conread position: 12-441
Cow position:
Alignm length: 434
Alignm identity: 263
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 121, 99

Conread position: 12-441
Cow position:
Alignm length: 438
Alignm identity: 287
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 6, 57

Conread position: 16-441
Cow position:
Alignm length: 428
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 50

Conread position: 18-395
Cow position:
Alignm length: 378
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 19-441
Cow position:
Alignm length: 423
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 19-441
Cow position:
Alignm length: 427
Alignm identity: 274
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 48

Conread position: 20-441
Cow position:
Alignm length: 425
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 43

Conread position: 43-441
Cow position:
Alignm length: 402
Alignm identity: 242
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 34

Conread position: 64-441
Cow position:
Alignm length: 379
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 253

Conread position: 73-438
Cow position:
Alignm length: 369
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 170

Conread position: 73-439
Cow position:
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 168

Conread position: 78-411
Cow position:
Alignm length: 335
Alignm identity: 203
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 257, 250

Conread position: 79-441
Cow position:
Alignm length: 366
Alignm identity: 231
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 182, 109

Conread position: 98-441
Cow position:
Alignm length: 347
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 55

Conread position: 157-439
Cow position:
Alignm length: 284
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 156

Conread position: 157-441
Cow position:
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 157

Conread position: 248-441
Cow position:
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 64, 70

Show alignments to all cow chromosomes.