Cow genome map
Conread name: | rpliv0115_k8.y1 |
Conread position: | 1-440 |
Cow position: | chr19:23649287-23649726 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 280 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 52, 66 |
Conread position: | 1-441 |
Cow position: | chr19:23613754-23614193 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 2-264 |
Cow position: | chr19:23614846-23615108 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 184 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-441 |
Cow position: | chr19:14959583-14959153 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 280 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 249, 243 |
Conread position: | 3-343 |
Cow position: | chr19:23614763-23615103 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-348 |
Cow position: | chr19:14940731-14941076 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-360 |
Cow position: | chr19:23650129-23650486 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 63 |
Conread position: | 3-364 |
Cow position: | chr19:23597352-23597713 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 62 |
Conread position: | 3-366 |
Cow position: | chr19:20678442-20678802 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 266, 0 |
Conread position: | 3-378 |
Cow position: | chr19:14959664-14959292 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 249 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 143, 13 |
Conread position: | 3-391 |
Cow position: | chr19:14948396-14948008 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 331, 327 |
Conread position: | 3-392 |
Cow position: | chr19:20678022-20678411 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 151 |
Conread position: | 3-394 |
Cow position: | chr19:14916034-14916420 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 261 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 47, 62 |
Conread position: | 3-395 |
Cow position: | chr19:14960236-14959846 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 62 |
Conread position: | 3-395 |
Cow position: | chr19:20635394-20635002 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 331, 327 |
Conread position: | 3-422 |
Cow position: | chr19:43570069-43569654 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 416, 336 |
Conread position: | 3-432 |
Cow position: | chr19:14948479-14948051 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 416, 75 |
Conread position: | 3-437 |
Cow position: | chr19:14960154-14959722 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 275 |
Conread position: | 3-437 |
Cow position: | chr19:23597100-23597534 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 60 |
Conread position: | 3-440 |
Cow position: | chr19:14940059-14940496 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-440 |
Cow position: | chr19:14940143-14940580 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 62 |
Conread position: | 3-440 |
Cow position: | chr19:23596935-23597369 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 97 |
Conread position: | 3-440 |
Cow position: | chr19:23613587-23614024 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 63 |
Conread position: | 3-440 |
Cow position: | chr19:23613671-23614108 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-440 |
Cow position: | chr19:23614091-23614528 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 304, 318 |
Conread position: | 3-440 |
Cow position: | chr19:23614427-23614864 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 304, 319 |
Conread position: | 3-440 |
Cow position: | chr19:23614595-23615032 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 154 |
Conread position: | 3-440 |
Cow position: | chr19:23649709-23650146 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 133 |
Conread position: | 3-441 |
Cow position: | chr19:14940311-14940749 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 331, 325 |
Conread position: | 3-441 |
Cow position: | chr19:14940395-14940833 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 61 |
Conread position: | 3-441 |
Cow position: | chr19:14940479-14940917 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 62 |
Conread position: | 3-441 |
Cow position: | chr19:14960320-14959884 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 62 |
Conread position: | 3-441 |
Cow position: | chr19:14960404-14959968 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 250, 0 |
Conread position: | 3-441 |
Cow position: | chr19:20635646-20635208 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 82 |
Conread position: | 3-441 |
Cow position: | chr19:20677518-20677956 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 331, 327 |
Conread position: | 3-441 |
Cow position: | chr19:20678190-20678628 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 299, 313 |
Conread position: | 3-441 |
Cow position: | chr19:23597019-23597454 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 14 |
Conread position: | 3-441 |
Cow position: | chr19:23613419-23613857 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-441 |
Cow position: | chr19:23613923-23614361 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-441 |
Cow position: | chr19:23614343-23614781 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 125 |
Conread position: | 3-441 |
Cow position: | chr19:23614511-23614949 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-441 |
Cow position: | chr19:23649457-23649895 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-441 |
Cow position: | chr19:23649625-23650063 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-441 |
Cow position: | chr19:23649877-23650315 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 71 |
Conread position: | 3-441 |
Cow position: | chr19:43570237-43569799 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 66 |
Conread position: | 4-392 |
Cow position: | chr19:20677687-20678075 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 326, 336 |
Conread position: | 4-393 |
Cow position: | chr19:20678275-20678664 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 330, 319 |
Conread position: | 4-395 |
Cow position: | chr19:20677771-20678162 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 74 |
Conread position: | 4-425 |
Cow position: | chr19:14940648-14941069 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 81 |
Conread position: | 4-431 |
Cow position: | chr19:23597269-23597696 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 415, 402 |
Conread position: | 4-437 |
Cow position: | chr19:14959254-14958827 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 0 |
Conread position: | 4-437 |
Cow position: | chr19:20635477-20635044 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-439 |
Cow position: | chr19:23614008-23614443 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 392, 402 |
Conread position: | 4-439 |
Cow position: | chr19:23650046-23650481 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-440 |
Cow position: | chr19:20677855-20678291 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 65 |
Conread position: | 4-441 |
Cow position: | chr19:14940228-14940665 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 61 |
Conread position: | 4-441 |
Cow position: | chr19:14940564-14941001 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 69 |
Conread position: | 4-441 |
Cow position: | chr19:20677939-20678376 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 84 |
Conread position: | 4-441 |
Cow position: | chr19:20678359-20678793 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 84 |
Conread position: | 4-441 |
Cow position: | chr19:23614176-23614613 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-441 |
Cow position: | chr19:43570152-43569717 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 419, 0 |
Conread position: | 5-441 |
Cow position: | chr19:23614261-23614697 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-441 |
Cow position: | chr19:23613506-23613941 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 144 |
Conread position: | 7-391 |
Cow position: | chr19:20677606-20677990 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 307, 311 |
Conread position: | 7-441 |
Cow position: | chr19:23597188-23597622 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 7-441 |
Cow position: | chr19:23649545-23649979 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 58 |
Conread position: | 7-441 |
Cow position: | chr19:23649797-23650231 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 58 |
Conread position: | 9-440 |
Cow position: | chr19:20677440-20677871 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 9-441 |
Cow position: | chr19:23649967-23650399 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 148 |
Conread position: | 10-432 |
Cow position: | chr19:23614686-23615108 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 60 |
Conread position: | 10-441 |
Cow position: | chr19:20635555-20635124 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-441 |
Cow position: | chr19:23613846-23614277 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 14-441 |
Cow position: | chr19:14960477-14960052 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 55 |
Conread position: | 16-436 |
Cow position: | chr19:14939988-14940408 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 19-437 |
Cow position: | chr19:23649389-23649807 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 266 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 49, 42 |
Conread position: | 19-440 |
Cow position: | chr19:23613351-23613772 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 20 |
Conread position: | 20-429 |
Cow position: | chr19:43570459-43570063 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 270 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 46, 11 |
Conread position: | 36-441 |
Cow position: | chr19:14959306-14958907 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 0 |
Conread position: | 71-441 |
Cow position: | chr19:14939960-14940329 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 73-441 |
Cow position: | chr19:14959678-14959312 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 248 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 342, 27 |
Conread position: | 75-437 |
Cow position: | chr19:14915857-14916215 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 227 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 42, 58 |
Conread position: | 78-440 |
Cow position: | chr19:43570246-43569884 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 88-440 |
Cow position: | chr19:20677435-20677787 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 225 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 90-405 |
Cow position: | chr19:14915952-14916266 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 211 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 62, 16 |
Conread position: | 96-440 |
Cow position: | chr19:20677359-20677703 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 213 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 52, 48 |
Conread position: | 97-441 |
Cow position: | chr19:14948469-14948126 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 220 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 103-441 |
Cow position: | chr19:23613351-23613689 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 294, 299 |
Conread position: | 167-441 |
Cow position: | chr19:43570398-43570135 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 193 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 70, 5 |
Show alignments to all cow chromosomes.