Cow genome map
| Conread name: | rpliv0115_k8.y1 |
| Conread position: | 1-368 |
| Cow position: | chr2:86465837-86466204 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 1-392 |
| Cow position: | chr2:86465165-86465556 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-394 |
| Cow position: | chr2:78754246-78754636 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 84, 5 |
| Conread position: | 1-395 |
| Cow position: | chr2:86465417-86465811 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 59, 72 |
| Conread position: | 3-191 |
| Cow position: | chr2:86466007-86466195 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-352 |
| Cow position: | chr2:82800099-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 79, 72 |
| Conread position: | 3-395 |
| Cow position: | chr2:82799511-82799903 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-395 |
| Cow position: | chr2:86465335-86465727 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 139, 145 |
| Conread position: | 3-437 |
| Cow position: | chr2:78754901-78755335 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 404 |
| Conread position: | 3-440 |
| Cow position: | chr2:78755321-78755754 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 16 |
| Conread position: | 3-440 |
| Cow position: | chr2:78755571-78756006 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 96 |
| Conread position: | 3-440 |
| Cow position: | chr2:82799679-82800116 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 221 |
| Conread position: | 3-441 |
| Cow position: | chr2:78754665-78755087 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 84, 26 |
| Conread position: | 3-441 |
| Cow position: | chr2:78754817-78755255 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-441 |
| Cow position: | chr2:78754985-78755422 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 226 |
| Conread position: | 3-441 |
| Cow position: | chr2:78755737-78756176 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 285 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 56, 76 |
| Conread position: | 3-441 |
| Cow position: | chr2:78755905-78756342 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 277 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 140, 156 |
| Conread position: | 3-441 |
| Cow position: | chr2:82799847-82800285 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 280 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 47, 62 |
| Conread position: | 3-441 |
| Cow position: | chr2:86465083-86465521 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 27, 16 |
| Conread position: | 3-441 |
| Cow position: | chr2:86465671-86466109 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 268 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 52, 85 |
| Conread position: | 5-441 |
| Cow position: | chr2:86465001-86465437 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 109, 98 |
| Conread position: | 10-392 |
| Cow position: | chr2:5874686-5874303 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 61 |
| Conread position: | 10-395 |
| Cow position: | chr2:86465762-86466147 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 193, 172 |
| Conread position: | 10-436 |
| Cow position: | chr2:82800022-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 214 |
| Conread position: | 10-440 |
| Cow position: | chr2:82799938-82800368 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 55 |
| Conread position: | 10-441 |
| Cow position: | chr2:82799770-82800201 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-387 |
| Cow position: | chr2:48689538-48689173 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 137 |
| Conread position: | 22-437 |
| Cow position: | chr2:78754101-78754511 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 226, 65 |
| Conread position: | 43-441 |
| Cow position: | chr2:82799467-82799865 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 22 |
| Conread position: | 197-440 |
| Cow position: | chr2:82799453-82799696 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 281-441 |
| Cow position: | chr2:82799453-82799613 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.