Cow genome map

Conread name: rpliv0115_k8.y1

Conread position: 2-392
Cow position:
Alignm length: 391
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-440
Cow position:
Alignm length: 440
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 157

Conread position: 2-440
Cow position:
Alignm length: 444
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 64

Conread position: 3-191
Cow position:
Alignm length: 189
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-275
Cow position:
Alignm length: 273
Alignm identity: 190
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 3-357
Cow position:
Alignm length: 356
Alignm identity: 232
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 58, 62

Conread position: 3-359
Cow position:
Alignm length: 362
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 69

Conread position: 3-360
Cow position:
Alignm length: 362
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 64

Conread position: 3-360
Cow position:
Alignm length: 359
Alignm identity: 238
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 306, 316

Conread position: 3-362
Cow position:
Alignm length: 364
Alignm identity: 232
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 83, 90

Conread position: 3-363
Cow position:
Alignm length: 362
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 237

Conread position: 3-363
Cow position:
Alignm length: 364
Alignm identity: 238
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 130, 138

Conread position: 3-374
Cow position:
Alignm length: 374
Alignm identity: 243
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 80, 65

Conread position: 3-388
Cow position:
Alignm length: 386
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-392
Cow position:
Alignm length: 391
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 225

Conread position: 3-392
Cow position:
Alignm length: 394
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 59

Conread position: 3-392
Cow position:
Alignm length: 392
Alignm identity: 257
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 125, 121

Conread position: 3-392
Cow position:
Alignm length: 392
Alignm identity: 239
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 326, 309

Conread position: 3-395
Cow position:
Alignm length: 393
Alignm identity: 229
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-395
Cow position:
Alignm length: 394
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 315

Conread position: 3-395
Cow position:
Alignm length: 396
Alignm identity: 256
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 79, 69

Conread position: 3-395
Cow position:
Alignm length: 396
Alignm identity: 244
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 129, 151

Conread position: 3-427
Cow position:
Alignm length: 429
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 138

Conread position: 3-431
Cow position:
Alignm length: 429
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-434
Cow position:
Alignm length: 436
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 82

Conread position: 3-434
Cow position:
Alignm length: 433
Alignm identity: 276
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 237, 225

Conread position: 3-440
Cow position:
Alignm length: 440
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 62

Conread position: 3-440
Cow position:
Alignm length: 439
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 393, 403

Conread position: 3-440
Cow position:
Alignm length: 439
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 66

Conread position: 3-440
Cow position:
Alignm length: 438
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-440
Cow position:
Alignm length: 438
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-440
Cow position:
Alignm length: 439
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 67

Conread position: 3-440
Cow position:
Alignm length: 438
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-440
Cow position:
Alignm length: 440
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 84

Conread position: 3-440
Cow position:
Alignm length: 438
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-440
Cow position:
Alignm length: 439
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 401, 393

Conread position: 3-440
Cow position:
Alignm length: 440
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 62

Conread position: 3-440
Cow position:
Alignm length: 443
Alignm identity: 282
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 80, 63

Conread position: 3-441
Cow position:
Alignm length: 440
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 322

Conread position: 3-441
Cow position:
Alignm length: 440
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 329

Conread position: 3-441
Cow position:
Alignm length: 442
Alignm identity: 283
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 130, 138

Conread position: 3-441
Cow position:
Alignm length: 444
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 155

Conread position: 3-441
Cow position:
Alignm length: 442
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 64

Conread position: 3-441
Cow position:
Alignm length: 442
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 321

Conread position: 3-441
Cow position:
Alignm length: 442
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 62

Conread position: 3-441
Cow position:
Alignm length: 440
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 323

Conread position: 3-441
Cow position:
Alignm length: 442
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 159

Conread position: 3-441
Cow position:
Alignm length: 457
Alignm identity: 260
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 62

Conread position: 3-441
Cow position:
Alignm length: 439
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-441
Cow position:
Alignm length: 441
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 158

Conread position: 3-441
Cow position:
Alignm length: 442
Alignm identity: 284
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 244, 225

Conread position: 3-441
Cow position:
Alignm length: 440
Alignm identity: 276
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 58, 70

Conread position: 3-441
Cow position:
Alignm length: 440
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 72

Conread position: 3-441
Cow position:
Alignm length: 441
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 62

Conread position: 3-441
Cow position:
Alignm length: 441
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 62

Conread position: 3-441
Cow position:
Alignm length: 439
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-441
Cow position:
Alignm length: 440
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 62

Conread position: 3-441
Cow position:
Alignm length: 441
Alignm identity: 277
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 129, 152

Conread position: 3-441
Cow position:
Alignm length: 439
Alignm identity: 275
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 4-434
Cow position:
Alignm length: 432
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 224

Conread position: 4-435
Cow position:
Alignm length: 434
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 229

Conread position: 4-437
Cow position:
Alignm length: 435
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 220

Conread position: 4-440
Cow position:
Alignm length: 438
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 224

Conread position: 4-441
Cow position:
Alignm length: 438
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-441
Cow position:
Alignm length: 441
Alignm identity: 285
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 8

Conread position: 4-441
Cow position:
Alignm length: 440
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 149

Conread position: 5-364
Cow position:
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 154

Conread position: 5-364
Cow position:
Alignm length: 360
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-393
Cow position:
Alignm length: 393
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 60

Conread position: 5-395
Cow position:
Alignm length: 393
Alignm identity: 248
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 123, 117

Conread position: 5-434
Cow position:
Alignm length: 432
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 150

Conread position: 5-440
Cow position:
Alignm length: 437
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 60

Conread position: 5-440
Cow position:
Alignm length: 439
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 222

Conread position: 5-441
Cow position:
Alignm length: 440
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 72

Conread position: 5-441
Cow position:
Alignm length: 441
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 60

Conread position: 5-441
Cow position:
Alignm length: 437
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-441
Cow position:
Alignm length: 437
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-441
Cow position:
Alignm length: 439
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 171

Conread position: 5-441
Cow position:
Alignm length: 439
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 171

Conread position: 5-441
Cow position:
Alignm length: 437
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-441
Cow position:
Alignm length: 443
Alignm identity: 284
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 152, 137

Conread position: 7-386
Cow position:
Alignm length: 382
Alignm identity: 250
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 47, 60

Conread position: 7-392
Cow position:
Alignm length: 389
Alignm identity: 247
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 47, 66

Conread position: 7-431
Cow position:
Alignm length: 427
Alignm identity: 270
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 47, 66

Conread position: 7-440
Cow position:
Alignm length: 435
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 391, 375

Conread position: 7-441
Cow position:
Alignm length: 436
Alignm identity: 270
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 139, 149

Conread position: 8-440
Cow position:
Alignm length: 433
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 8-441
Cow position:
Alignm length: 434
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-440
Cow position:
Alignm length: 433
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 67

Conread position: 12-395
Cow position:
Alignm length: 385
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 306

Conread position: 13-440
Cow position:
Alignm length: 434
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 54

Conread position: 16-441
Cow position:
Alignm length: 431
Alignm identity: 267
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 141, 128

Conread position: 19-393
Cow position:
Alignm length: 378
Alignm identity: 235
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 51

Conread position: 19-441
Cow position:
Alignm length: 424
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 296

Conread position: 22-441
Cow position:
Alignm length: 421
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 44

Conread position: 24-440
Cow position:
Alignm length: 418
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 100

Conread position: 28-441
Cow position:
Alignm length: 417
Alignm identity: 263
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 121, 116

Conread position: 28-441
Cow position:
Alignm length: 416
Alignm identity: 263
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 138, 134

Conread position: 28-441
Cow position:
Alignm length: 416
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 131

Conread position: 46-441
Cow position:
Alignm length: 396
Alignm identity: 248
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 18, 0

Conread position: 66-441
Cow position:
Alignm length: 376
Alignm identity: 241
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 73-393
Cow position:
Alignm length: 322
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 172

Conread position: 80-441
Cow position:
Alignm length: 367
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 11

Conread position: 80-441
Cow position:
Alignm length: 364
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 7

Conread position: 88-441
Cow position:
Alignm length: 354
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 99-393
Cow position:
Alignm length: 296
Alignm identity: 200
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 151, 140

Conread position: 106-441
Cow position:
Alignm length: 336
Alignm identity: 202
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 166-393
Cow position:
Alignm length: 228
Alignm identity: 156
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 218, 0

Conread position: 166-441
Cow position:
Alignm length: 277
Alignm identity: 189
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 170, 163

Conread position: 167-407
Cow position:
Alignm length: 241
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 167-441
Cow position:
Alignm length: 275
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.