Cow genome map


           Conread name:
           rpliv0115_k8.y1
        

               Conread position:
               3-349
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 226
               

               Conread position:
               3-358
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 143
               

               Conread position:
               3-388
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               244
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               91, 75
               

               Conread position:
               3-392
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               3-392
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               52, 66
               

               Conread position:
               3-406
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               266
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               248, 28
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 66
               

               Conread position:
               3-434
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 35
               

               Conread position:
               3-435
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 317
               

               Conread position:
               3-440
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 30
               

               Conread position:
               3-440
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 151
               

               Conread position:
               3-441
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 66
               

               Conread position:
               3-441
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 66
               

               Conread position:
               3-441
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 150
               

               Conread position:
               3-441
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 65
               

               Conread position:
               3-441
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               391, 197
               

               Conread position:
               3-441
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 151
               

               Conread position:
               3-441
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 66
               

               Conread position:
               3-441
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               58, 48
               

               Conread position:
               3-441
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 58
               

               Conread position:
               3-441
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               278
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               58, 62
               

               Conread position:
               3-441
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 67
               

               Conread position:
               3-441
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 72
               

               Conread position:
               4-291
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               54, 64
               

               Conread position:
               4-431
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               273
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               128, 135
               

               Conread position:
               4-441
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 65
               

               Conread position:
               5-392
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               48, 61
               

               Conread position:
               5-395
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               48, 61
               

               Conread position:
               5-434
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 63
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               295, 312
               

               Conread position:
               7-335
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               43, 58
               

               Conread position:
               8-441
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               281
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               44, 62
               

               Conread position:
               10-374
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 143
               

               Conread position:
               10-387
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               248
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               7, 60
               

               Conread position:
               10-411
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               245
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               72, 65
               

               Conread position:
               10-438
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 143
               

               Conread position:
               10-441
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               42, 55
               

               Conread position:
               11-441
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               140, 57
               

               Conread position:
               16-361
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               234
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               42, 63
               

               Conread position:
               18-395
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               35, 47
               

               Conread position:
               19-440
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 127
               

               Conread position:
               21-437
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 52
               

               Conread position:
               40-441
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 280
               

               Conread position:
               66-436
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               101, 49
               

               Conread position:
               67-441
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               240
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               94-441
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               127, 144
               

               Conread position:
               102-437
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               219
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               116, 126
               

               Conread position:
               103-441
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               112-441
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               34, 47
               

               Conread position:
               153-441
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               152, 163
               

               Conread position:
               208-441
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-441
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               44, 0
               
Show alignments to all cow chromosomes.