Cow genome map
| Conread name: | rpliv0115_k8.y1 |
| Conread position: | 1-184 |
| Cow position: | chr3:16020397-16020214 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 143, 153 |
| Conread position: | 1-441 |
| Cow position: | chr3:62722259-62721819 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-251 |
| Cow position: | chr3:68027496-68027744 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-414 |
| Cow position: | chr3:68027328-68027739 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 308 |
| Conread position: | 3-431 |
| Cow position: | chr3:68045921-68046349 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 62 |
| Conread position: | 3-432 |
| Cow position: | chr3:62743081-62743505 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 35 |
| Conread position: | 3-437 |
| Cow position: | chr3:68027160-68027594 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 224 |
| Conread position: | 3-437 |
| Cow position: | chr3:68045753-68046187 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 156 |
| Conread position: | 3-440 |
| Cow position: | chr3:68027076-68027513 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 319 |
| Conread position: | 3-441 |
| Cow position: | chr3:62722089-62721651 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-441 |
| Cow position: | chr3:62742430-62742863 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 0 |
| Conread position: | 3-441 |
| Cow position: | chr3:68045669-68046107 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 238 |
| Conread position: | 4-343 |
| Cow position: | chr3:77350927-77350591 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 77, 68 |
| Conread position: | 4-358 |
| Cow position: | chr3:68046006-68046358 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 140, 150 |
| Conread position: | 4-440 |
| Cow position: | chr3:62722172-62721736 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-440 |
| Cow position: | chr3:62742762-62743177 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 244 |
| Conread position: | 4-440 |
| Cow position: | chr3:68027245-68027681 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 318 |
| Conread position: | 4-440 |
| Cow position: | chr3:68045838-68046274 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 283 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 58, 69 |
| Conread position: | 5-396 |
| Cow position: | chr3:77351087-77350703 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 107, 63 |
| Conread position: | 5-435 |
| Cow position: | chr3:62722003-62721573 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-439 |
| Cow position: | chr3:68026995-68027428 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 6 |
| Conread position: | 6-433 |
| Cow position: | chr3:77351169-77350750 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 48, 63 |
| Conread position: | 8-308 |
| Cow position: | chr3:16020467-16020177 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 295, 51 |
| Conread position: | 9-441 |
| Cow position: | chr3:62742269-62742697 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 279 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 44, 56 |
| Conread position: | 10-441 |
| Cow position: | chr3:62742605-62743027 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 36 |
| Conread position: | 21-441 |
| Cow position: | chr3:62722323-62721903 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-441 |
| Cow position: | chr3:62743034-62743430 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 66-441 |
| Cow position: | chr3:62742241-62742616 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 249 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 11, 94 |
| Conread position: | 67-441 |
| Cow position: | chr3:68045565-68045939 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 90 |
| Conread position: | 92-352 |
| Cow position: | chr3:16020467-16020214 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 206, 55 |
| Conread position: | 176-436 |
| Cow position: | chr3:16020467-16020214 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 136, 52 |
| Conread position: | 240-441 |
| Cow position: | chr3:68027061-68027262 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.