Cow genome map

Conread name: rpliv0115_k8.y1

Conread position: 1-184
Cow position: chr3:16020397-16020214 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 143, 153

Conread position: 1-441
Cow position: chr3:62722259-62721819 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-251
Cow position: chr3:68027496-68027744 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 3-414
Cow position: chr3:68027328-68027739 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 308

Conread position: 3-431
Cow position: chr3:68045921-68046349 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 62

Conread position: 3-432
Cow position: chr3:62743081-62743505 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 35

Conread position: 3-437
Cow position: chr3:68027160-68027594 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 224

Conread position: 3-437
Cow position: chr3:68045753-68046187 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 156

Conread position: 3-440
Cow position: chr3:68027076-68027513 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 319

Conread position: 3-441
Cow position: chr3:62722089-62721651 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-441
Cow position: chr3:62742430-62742863 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 3-441
Cow position: chr3:68045669-68046107 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 238

Conread position: 4-343
Cow position: chr3:77350927-77350591 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 218
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 77, 68

Conread position: 4-358
Cow position: chr3:68046006-68046358 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 236
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 140, 150

Conread position: 4-440
Cow position: chr3:62722172-62721736 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-440
Cow position: chr3:62742762-62743177 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 244

Conread position: 4-440
Cow position: chr3:68027245-68027681 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 318

Conread position: 4-440
Cow position: chr3:68045838-68046274 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 283
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 58, 69

Conread position: 5-396
Cow position: chr3:77351087-77350703 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 244
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 107, 63

Conread position: 5-435
Cow position: chr3:62722003-62721573 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-439
Cow position: chr3:68026995-68027428 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 6

Conread position: 6-433
Cow position: chr3:77351169-77350750 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 275
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 48, 63

Conread position: 8-308
Cow position: chr3:16020467-16020177 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 197
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 295, 51

Conread position: 9-441
Cow position: chr3:62742269-62742697 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 279
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 44, 56

Conread position: 10-441
Cow position: chr3:62742605-62743027 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 21-441
Cow position: chr3:62722323-62721903 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 40-441
Cow position: chr3:62743034-62743430 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 66-441
Cow position: chr3:62742241-62742616 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 249
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 11, 94

Conread position: 67-441
Cow position: chr3:68045565-68045939 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 90

Conread position: 92-352
Cow position: chr3:16020467-16020214 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 206, 55

Conread position: 176-436
Cow position: chr3:16020467-16020214 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 136, 52

Conread position: 240-441
Cow position: chr3:68027061-68027262 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.