Cow genome map


           Conread name:
           rpliv0117_i12.y1
        

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               55, 106
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               55, 101
               

               Conread position:
               4-232
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               52, 8
               

               Conread position:
               4-232
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               52, 9
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               19, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               51, 91
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               179
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               51, 34
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               51, 72
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               179
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               181
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               183
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               181
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               51, 90
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               51, 117
               

               Conread position:
               5-233
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               6-233
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               50, 98
               

               Conread position:
               9-230
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               47, 7
               

               Conread position:
               9-230
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               9-231
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               48, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               61, 92
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               45, 93
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               47, 86
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               47, 90
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               47, 98
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               15, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               178
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               32, 99
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               43, 88
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               47, 17
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               47, 98
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               49, 93
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               47, 64
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               180
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               47, 93
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               47, 63
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               47, 90
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               9-233
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               9-233
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               47, 71
               

               Conread position:
               9-234
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               43, 95
               

               Conread position:
               9-262
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               9-462
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 66
               

               Conread position:
               10-232
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               46, 94
               

               Conread position:
               10-232
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               46, 95
               

               Conread position:
               10-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               5, 62
               

               Conread position:
               10-232
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               46, 28
               

               Conread position:
               11-232
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               45, 24
               

               Conread position:
               11-232
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               45, 84
               

               Conread position:
               11-232
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               45, 71
               

               Conread position:
               11-232
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               179
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               45, 94
               

               Conread position:
               12-232
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               40, 93
               

               Conread position:
               15-232
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               41, 90
               

               Conread position:
               17-232
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               39, 75
               

               Conread position:
               20-232
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               36, 85
               

               Conread position:
               23-232
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               33, 81
               

               Conread position:
               28-232
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               25, 77
               

               Conread position:
               43-232
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               13, 62
               

               Conread position:
               60-252
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               174, 44
               

               Conread position:
               63-232
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               55, 25
               

               Conread position:
               118-232
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               119-232
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-232
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-232
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               120-230
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               120-232
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               125-232
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               126-232
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               126-233
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               128-232
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               133-232
               

               Cow position:
               
               

               Alignm length:
               100
               

               Alignm identity:
               87
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               137-232
               

               Cow position:
               
               

               Alignm length:
               96
               

               Alignm identity:
               82
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               143-232
               

               Cow position:
               
               

               Alignm length:
               90
               

               Alignm identity:
               79
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               151-232
               

               Cow position:
               
               

               Alignm length:
               82
               

               Alignm identity:
               75
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.