Cow genome map


           Conread name:
           rpliv0117_i12.y1
        

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               55, 19
               

               Conread position:
               4-232
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               180
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               52, 8
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 98
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               178
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               51, 90
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               51, 39
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               51, 98
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               167, 57
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               51, 34
               

               Conread position:
               5-233
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-233
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               51, 33
               

               Conread position:
               5-268
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               9-230
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               48, 95
               

               Conread position:
               9-231
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               45, 88
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               47, 29
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               47, 87
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               9, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               182
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               47, 26
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               43, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               47, 23
               

               Conread position:
               10-231
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               46, 85
               

               Conread position:
               10-232
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               46, 94
               

               Conread position:
               10-232
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               46, 33
               

               Conread position:
               21-232
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               35, 84
               

               Conread position:
               32-232
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               24, 67
               

               Conread position:
               51-232
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               118-232
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 64
               

               Conread position:
               118-232
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               28, 12
               

               Conread position:
               119-232
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               119-232
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-232
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-232
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               119-232
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               120-231
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               120-232
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               120-232
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               121-232
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               125-266
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               127-232
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               137-232
               

               Cow position:
               
               

               Alignm length:
               96
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-232
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               78
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               158-232
               

               Cow position:
               
               

               Alignm length:
               75
               

               Alignm identity:
               70
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.