Cow genome map

Conread name: rpliv0117_i12.y1

Conread position: 4-232
Cow position: chr13:34906559-34906350 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 7, 48

Conread position: 5-230
Cow position: chr13:13901830-13902040 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 51, 99

Conread position: 5-232
Cow position: chr13:562424-562209 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 51, 90

Conread position: 5-232
Cow position: chr13:3023309-3023102 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 66

Conread position: 5-232
Cow position: chr13:4733498-4733711 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 178
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 51, 41

Conread position: 5-232
Cow position: chr13:4735242-4735455 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 178
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 51, 41

Conread position: 5-232
Cow position: chr13:6359809-6360025 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 181
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 47, 99

Conread position: 5-232
Cow position: chr13:8069190-8068975 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 180
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 51, 100

Conread position: 5-232
Cow position: chr13:11389170-11389385 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 177
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 51, 99

Conread position: 5-232
Cow position: chr13:11762668-11762457 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 175
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 52, 33

Conread position: 5-232
Cow position: chr13:13326906-13327121 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 51, 99

Conread position: 5-232
Cow position: chr13:16921424-16921639 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 181
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 51, 100

Conread position: 5-232
Cow position: chr13:17310382-17310597 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 176
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 51, 99

Conread position: 5-232
Cow position: chr13:21698242-21698456 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 179
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 51, 100

Conread position: 5-232
Cow position: chr13:32983434-32983220 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 51, 22

Conread position: 5-232
Cow position: chr13:33523993-33523778 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 51, 99

Conread position: 5-232
Cow position: chr13:49613570-49613355 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 179
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 51, 100

Conread position: 5-232
Cow position: chr13:50111432-50111647 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 51, 99

Conread position: 5-462
Cow position: chr13:21838250-21837816 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 99

Conread position: 9-232
Cow position: chr13:4485821-4486032 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 47, 96

Conread position: 9-232
Cow position: chr13:11827754-11827546 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 179
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 47, 95

Conread position: 9-232
Cow position: chr13:15279823-15279612 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 178
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 47, 96

Conread position: 9-232
Cow position: chr13:15922488-15922280 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 47, 96

Conread position: 9-232
Cow position: chr13:30305165-30305372 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 47, 95

Conread position: 9-232
Cow position: chr13:30653315-30653105 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 178
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 47, 40

Conread position: 9-232
Cow position: chr13:31508878-31509086 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 177
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 47, 95

Conread position: 9-232
Cow position: chr13:31728929-31728719 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 43, 96

Conread position: 9-232
Cow position: chr13:34343880-34344091 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 96

Conread position: 9-232
Cow position: chr13:34509840-34509632 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 47, 95

Conread position: 9-232
Cow position: chr13:35539132-35539343 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 180
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 47, 95

Conread position: 9-233
Cow position: chr13:6666170-6665955 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 182
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 47, 95

Conread position: 9-250
Cow position: chr13:32548727-32548954 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 46, 90

Conread position: 9-268
Cow position: chr13:61953209-61953454 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 47, 95

Conread position: 10-232
Cow position: chr13:15559305-15559513 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 46, 95

Conread position: 10-232
Cow position: chr13:34040375-34040163 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 46, 95

Conread position: 10-232
Cow position: chr13:42089716-42089509 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 28

Conread position: 12-232
Cow position: chr13:18331133-18330931 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 44, 26

Conread position: 14-232
Cow position: chr13:24932820-24932615 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 42, 90

Conread position: 15-233
Cow position: chr13:30089154-30089364 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 90

Conread position: 29-232
Cow position: chr13:21879823-21879632 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 161
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 30, 71

Conread position: 54-232
Cow position: chr13:3692933-3692769 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 65-232
Cow position: chr13:3555422-3555589 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 102
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 110-232
Cow position: chr13:34322946-34322823 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 119-231
Cow position: chr13:5623685-5623573 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 119-232
Cow position: chr13:669312-669425 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 119-232
Cow position: chr13:11737821-11737934 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 119-232
Cow position: chr13:28527840-28527729 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 119-232
Cow position: chr13:32777032-32776919 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 119-232
Cow position: chr13:32923205-32923092 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 119-232
Cow position: chr13:35759624-35759737 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 119-232
Cow position: chr13:60511642-60511755 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 174-447
Cow position: chr13:19423839-19424100 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 94, 58

Show alignments to all cow chromosomes.