Cow genome map
Conread name: | rpliv0117_i12.y1 |
Conread position: | 4-232 |
Cow position: | chr13:34906559-34906350 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 174 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 7, 48 |
Conread position: | 5-230 |
Cow position: | chr13:13901830-13902040 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 173 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr13:562424-562209 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 173 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 51, 90 |
Conread position: | 5-232 |
Cow position: | chr13:3023309-3023102 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 172 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 51, 66 |
Conread position: | 5-232 |
Cow position: | chr13:4733498-4733711 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 178 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 51, 41 |
Conread position: | 5-232 |
Cow position: | chr13:4735242-4735455 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 178 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 51, 41 |
Conread position: | 5-232 |
Cow position: | chr13:6359809-6360025 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 181 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 47, 99 |
Conread position: | 5-232 |
Cow position: | chr13:8069190-8068975 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 180 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 51, 100 |
Conread position: | 5-232 |
Cow position: | chr13:11389170-11389385 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 177 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr13:11762668-11762457 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 175 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 52, 33 |
Conread position: | 5-232 |
Cow position: | chr13:13326906-13327121 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 175 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr13:16921424-16921639 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 181 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 51, 100 |
Conread position: | 5-232 |
Cow position: | chr13:17310382-17310597 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 176 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr13:21698242-21698456 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 179 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 51, 100 |
Conread position: | 5-232 |
Cow position: | chr13:32983434-32983220 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 174 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 51, 22 |
Conread position: | 5-232 |
Cow position: | chr13:33523993-33523778 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 173 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr13:49613570-49613355 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 179 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 51, 100 |
Conread position: | 5-232 |
Cow position: | chr13:50111432-50111647 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 175 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-462 |
Cow position: | chr13:21838250-21837816 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 9-232 |
Cow position: | chr13:4485821-4486032 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 172 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 47, 96 |
Conread position: | 9-232 |
Cow position: | chr13:11827754-11827546 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 179 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 47, 95 |
Conread position: | 9-232 |
Cow position: | chr13:15279823-15279612 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 178 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 47, 96 |
Conread position: | 9-232 |
Cow position: | chr13:15922488-15922280 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 172 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 47, 96 |
Conread position: | 9-232 |
Cow position: | chr13:30305165-30305372 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 170 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 47, 95 |
Conread position: | 9-232 |
Cow position: | chr13:30653315-30653105 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 178 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 47, 40 |
Conread position: | 9-232 |
Cow position: | chr13:31508878-31509086 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 177 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 47, 95 |
Conread position: | 9-232 |
Cow position: | chr13:31728929-31728719 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 175 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 43, 96 |
Conread position: | 9-232 |
Cow position: | chr13:34343880-34344091 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 96 |
Conread position: | 9-232 |
Cow position: | chr13:34509840-34509632 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 174 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 47, 95 |
Conread position: | 9-232 |
Cow position: | chr13:35539132-35539343 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 180 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 47, 95 |
Conread position: | 9-233 |
Cow position: | chr13:6666170-6665955 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 182 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 47, 95 |
Conread position: | 9-250 |
Cow position: | chr13:32548727-32548954 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 186 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 46, 90 |
Conread position: | 9-268 |
Cow position: | chr13:61953209-61953454 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 200 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 47, 95 |
Conread position: | 10-232 |
Cow position: | chr13:15559305-15559513 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 172 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 46, 95 |
Conread position: | 10-232 |
Cow position: | chr13:34040375-34040163 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 175 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 46, 95 |
Conread position: | 10-232 |
Cow position: | chr13:42089716-42089509 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 163 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 46, 28 |
Conread position: | 12-232 |
Cow position: | chr13:18331133-18330931 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 168 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 44, 26 |
Conread position: | 14-232 |
Cow position: | chr13:24932820-24932615 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 168 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 42, 90 |
Conread position: | 15-233 |
Cow position: | chr13:30089154-30089364 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 159 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 47, 90 |
Conread position: | 29-232 |
Cow position: | chr13:21879823-21879632 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 161 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 30, 71 |
Conread position: | 54-232 |
Cow position: | chr13:3692933-3692769 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 138 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 65-232 |
Cow position: | chr13:3555422-3555589 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 102 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 110-232 |
Cow position: | chr13:34322946-34322823 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 99 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 119-231 |
Cow position: | chr13:5623685-5623573 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 92 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 119-232 |
Cow position: | chr13:669312-669425 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 90 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 119-232 |
Cow position: | chr13:11737821-11737934 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 93 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 119-232 |
Cow position: | chr13:28527840-28527729 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 95 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 119-232 |
Cow position: | chr13:32777032-32776919 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 90 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 119-232 |
Cow position: | chr13:32923205-32923092 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 93 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 119-232 |
Cow position: | chr13:35759624-35759737 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 94 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 119-232 |
Cow position: | chr13:60511642-60511755 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 96 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 174-447 |
Cow position: | chr13:19423839-19424100 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 208 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 94, 58 |
Show alignments to all cow chromosomes.