Cow genome map
| Conread name: | rpliv0117_i12.y1 |
| Conread position: | 1-232 |
| Cow position: | chr14:44290899-44291118 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 55, 103 |
| Conread position: | 5-232 |
| Cow position: | chr14:1660293-1660504 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 51, 99 |
| Conread position: | 5-232 |
| Cow position: | chr14:13304942-13305156 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 51, 102 |
| Conread position: | 5-232 |
| Cow position: | chr14:23255504-23255289 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 183 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 52, 93 |
| Conread position: | 5-232 |
| Cow position: | chr14:34763317-34763102 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 180 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 51, 100 |
| Conread position: | 5-232 |
| Cow position: | chr14:46221918-46222133 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 179 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 51, 100 |
| Conread position: | 5-232 |
| Cow position: | chr14:46434459-46434669 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 25 |
| Conread position: | 9-230 |
| Cow position: | chr14:34668949-34668739 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 47, 96 |
| Conread position: | 9-231 |
| Cow position: | chr14:13275158-13275366 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 47, 95 |
| Conread position: | 9-231 |
| Cow position: | chr14:13580680-13580880 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 47, 69 |
| Conread position: | 9-232 |
| Cow position: | chr14:11475448-11475237 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 44, 96 |
| Conread position: | 9-232 |
| Cow position: | chr14:12741203-12740992 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 47, 96 |
| Conread position: | 9-232 |
| Cow position: | chr14:15273710-15273501 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 47, 19 |
| Conread position: | 9-232 |
| Cow position: | chr14:19326418-19326208 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 47, 95 |
| Conread position: | 9-232 |
| Cow position: | chr14:20784433-20784639 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 47, 59 |
| Conread position: | 9-232 |
| Cow position: | chr14:28209740-28209950 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 47, 62 |
| Conread position: | 9-232 |
| Cow position: | chr14:32448801-32449012 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 47, 96 |
| Conread position: | 9-232 |
| Cow position: | chr14:36908364-36908153 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 47, 96 |
| Conread position: | 9-232 |
| Cow position: | chr14:37226001-37226209 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 47, 29 |
| Conread position: | 9-232 |
| Cow position: | chr14:40344153-40344364 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 47, 95 |
| Conread position: | 9-232 |
| Cow position: | chr14:41272352-41272141 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 51, 95 |
| Conread position: | 9-232 |
| Cow position: | chr14:41444171-41444382 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 47, 94 |
| Conread position: | 9-232 |
| Cow position: | chr14:45087046-45087256 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 9-232 |
| Cow position: | chr14:46122972-46123180 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 9-233 |
| Cow position: | chr14:17688691-17688902 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 47, 81 |
| Conread position: | 10-232 |
| Cow position: | chr14:22029626-22029416 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 46, 95 |
| Conread position: | 10-232 |
| Cow position: | chr14:32473301-32473091 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 178 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 44, 94 |
| Conread position: | 11-232 |
| Cow position: | chr14:44691023-44691232 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 45, 93 |
| Conread position: | 12-232 |
| Cow position: | chr14:191897-192103 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 44, 93 |
| Conread position: | 13-232 |
| Cow position: | chr14:45163941-45164146 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 43, 91 |
| Conread position: | 34-232 |
| Cow position: | chr14:33678946-33679132 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 119-232 |
| Cow position: | chr14:13237874-13237762 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 119-232 |
| Cow position: | chr14:35383703-35383593 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 120-206 |
| Cow position: | chr14:44381275-44381361 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 75 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 125-232 |
| Cow position: | chr14:13861575-13861468 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-232 |
| Cow position: | chr14:22104611-22104505 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 134-232 |
| Cow position: | chr14:31684730-31684632 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.