Cow genome map


           Conread name:
           rpliv0117_i12.y1
        

               Conread position:
               4-232
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               52, 101
               

               Conread position:
               4-232
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               10, 102
               

               Conread position:
               5-222
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-231
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               51, 94
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               51, 34
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               50, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               181
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               51, 98
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               48, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               179
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               51, 95
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               182
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-233
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-265
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               51, 93
               

               Conread position:
               5-460
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               6-232
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               9-230
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               48, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               48, 93
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               48, 95
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               46, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               178
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               47, 94
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               47, 94
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               47, 29
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               43, 95
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               48, 93
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               47, 31
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               178
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-233
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               47, 99
               

               Conread position:
               9-252
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               47, 23
               

               Conread position:
               9-262
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               10-232
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               46, 94
               

               Conread position:
               10-232
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               46, 32
               

               Conread position:
               11-232
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               23, 100
               

               Conread position:
               11-232
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               175
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               45, 94
               

               Conread position:
               12-232
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               13-232
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               13-232
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               43, 82
               

               Conread position:
               14-232
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               49, 88
               

               Conread position:
               21-232
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               31, 83
               

               Conread position:
               28-232
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 68
               

               Conread position:
               32-226
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               24, 75
               

               Conread position:
               32-232
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               25, 62
               

               Conread position:
               41-232
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               15, 63
               

               Conread position:
               51-232
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               77-232
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-232
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               119-232
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               119-232
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-232
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-233
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               121-232
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               46, 36
               

               Conread position:
               144-232
               

               Cow position:
               
               

               Alignm length:
               89
               

               Alignm identity:
               78
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               144-232
               

               Cow position:
               
               

               Alignm length:
               89
               

               Alignm identity:
               78
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.