Cow genome map


           Conread name:
           rpliv0117_i12.y1
        

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               184
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               55, 103
               

               Conread position:
               3-230
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               62, 101
               

               Conread position:
               3-232
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               7, 36
               

               Conread position:
               3-232
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               53, 101
               

               Conread position:
               5-230
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               21, 34
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               50, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               50, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               48, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               51, 98
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               51, 21
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               49, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               51, 101
               

               Conread position:
               5-250
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               9-206
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               47, 97
               

               Conread position:
               9-222
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               47, 86
               

               Conread position:
               9-231
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               177
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               9-231
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               53, 22
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               45, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               179
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               45, 88
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               47, 90
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               47, 7
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               46, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               47, 91
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               47, 94
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               9-233
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-263
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               47, 90
               

               Conread position:
               11-231
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 87
               

               Conread position:
               11-232
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               45, 94
               

               Conread position:
               12-232
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               44, 92
               

               Conread position:
               13-230
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               43, 19
               

               Conread position:
               17-232
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               39, 87
               

               Conread position:
               20-232
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               36, 85
               

               Conread position:
               20-232
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               36, 83
               

               Conread position:
               32-232
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               24, 73
               

               Conread position:
               33-232
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               23, 72
               

               Conread position:
               37-249
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               19, 65
               

               Conread position:
               119-232
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               143-232
               

               Cow position:
               
               

               Alignm length:
               90
               

               Alignm identity:
               80
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               150-232
               

               Cow position:
               
               

               Alignm length:
               83
               

               Alignm identity:
               75
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.