Cow genome map

Conread name: rpliv0117_i12.y1

Conread position: 4-232
Cow position: chr18:16092090-16092306 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 182
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 52, 118

Conread position: 5-232
Cow position: chr18:604180-603969 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 51, 99

Conread position: 5-232
Cow position: chr18:16080798-16081013 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 178
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 51, 99

Conread position: 5-232
Cow position: chr18:28767075-28767290 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 180
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 51, 100

Conread position: 5-232
Cow position: chr18:30762685-30762470 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 181
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 51, 100

Conread position: 5-232
Cow position: chr18:32437829-32437614 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 179
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 51, 99

Conread position: 5-232
Cow position: chr18:32655964-32656178 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 48, 13

Conread position: 5-232
Cow position: chr18:37701213-37701001 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 178
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 51, 34

Conread position: 5-232
Cow position: chr18:47743769-47743983 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 182
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 51, 72

Conread position: 5-233
Cow position: chr18:1046627-1046846 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 101

Conread position: 8-232
Cow position: chr18:51483873-51484085 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 48, 97

Conread position: 9-232
Cow position: chr18:4948223-4948433 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 47, 102

Conread position: 9-232
Cow position: chr18:14132667-14132883 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 86

Conread position: 9-232
Cow position: chr18:16174340-16174119 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 113

Conread position: 9-232
Cow position: chr18:25922669-25922880 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 47, 95

Conread position: 9-232
Cow position: chr18:27835807-27835597 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 47, 96

Conread position: 9-232
Cow position: chr18:28970007-28969799 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 47, 90

Conread position: 9-232
Cow position: chr18:29864328-29864117 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 177
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 47, 96

Conread position: 9-232
Cow position: chr18:36510900-36511108 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 47, 96

Conread position: 9-232
Cow position: chr18:36775549-36775764 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 25, 99

Conread position: 9-232
Cow position: chr18:37508245-37508456 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 176
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 47, 96

Conread position: 10-232
Cow position: chr18:54272704-54272916 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 89

Conread position: 11-232
Cow position: chr18:27167908-27168117 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 173
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 45, 93

Conread position: 12-232
Cow position: chr18:28929303-28929103 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 178
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 44, 82

Conread position: 13-232
Cow position: chr18:54168601-54168394 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 175
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 43, 92

Conread position: 15-232
Cow position: chr18:1956886-1956681 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 172
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 41, 90

Conread position: 16-232
Cow position: chr18:36647457-36647662 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 40, 58

Conread position: 20-232
Cow position: chr18:23801313-23801513 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 170
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 36, 73

Conread position: 27-232
Cow position: chr18:3755239-3755432 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 29, 78

Conread position: 41-232
Cow position: chr18:51662459-51662637 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 15, 62

Conread position: 119-232
Cow position: chr18:5535369-5535482 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 119-232
Cow position: chr18:19354738-19354851 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 119-232
Cow position: chr18:33101701-33101814 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 119-232
Cow position: chr18:33987835-33987948 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 119-232
Cow position: chr18:51696668-51696782 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 119-238
Cow position: chr18:56035765-56035884 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 125-232
Cow position: chr18:38160477-38160371 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 129-232
Cow position: chr18:5201911-5202014 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 134-232
Cow position: chr18:18215898-18215996 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 85
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.