Cow genome map
| Conread name: | rpliv0117_i12.y1 |
| Conread position: | 5-222 |
| Cow position: | chr19:40627-40829 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 51, 34 |
| Conread position: | 5-232 |
| Cow position: | chr19:2271836-2271624 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 51, 100 |
| Conread position: | 5-232 |
| Cow position: | chr19:7344312-7344527 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 183 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 51, 100 |
| Conread position: | 5-232 |
| Cow position: | chr19:7481654-7481443 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 5-232 |
| Cow position: | chr19:15445581-15445371 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 51, 99 |
| Conread position: | 5-232 |
| Cow position: | chr19:16318330-16318115 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 51, 100 |
| Conread position: | 5-232 |
| Cow position: | chr19:20107005-20107225 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 51, 23 |
| Conread position: | 5-232 |
| Cow position: | chr19:20610611-20610826 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 51, 99 |
| Conread position: | 5-232 |
| Cow position: | chr19:43146953-43147168 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 51, 99 |
| Conread position: | 9-206 |
| Cow position: | chr19:4387877-4388062 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 47, 96 |
| Conread position: | 9-230 |
| Cow position: | chr19:28404285-28404076 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 47, 90 |
| Conread position: | 9-232 |
| Cow position: | chr19:343534-343738 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 48, 59 |
| Conread position: | 9-232 |
| Cow position: | chr19:890951-890741 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 47, 100 |
| Conread position: | 9-232 |
| Cow position: | chr19:5731796-5732003 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 47, 96 |
| Conread position: | 9-232 |
| Cow position: | chr19:7490384-7490592 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 47, 96 |
| Conread position: | 9-232 |
| Cow position: | chr19:9705901-9705689 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 47, 90 |
| Conread position: | 9-232 |
| Cow position: | chr19:12775406-12775617 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 47, 96 |
| Conread position: | 9-232 |
| Cow position: | chr19:21338560-21338349 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 47, 96 |
| Conread position: | 9-232 |
| Cow position: | chr19:33875700-33875909 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 47, 86 |
| Conread position: | 9-232 |
| Cow position: | chr19:39183256-39183045 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 47, 83 |
| Conread position: | 9-232 |
| Cow position: | chr19:39392795-39393005 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 47, 86 |
| Conread position: | 9-232 |
| Cow position: | chr19:39666264-39666057 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 47, 78 |
| Conread position: | 9-232 |
| Cow position: | chr19:40834978-40834770 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 181 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 44, 95 |
| Conread position: | 9-232 |
| Cow position: | chr19:40850202-40849993 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 49, 95 |
| Conread position: | 10-232 |
| Cow position: | chr19:206789-206998 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 46, 95 |
| Conread position: | 11-232 |
| Cow position: | chr19:33905343-33905565 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 45, 110 |
| Conread position: | 15-232 |
| Cow position: | chr19:1584756-1584960 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 175 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 41, 79 |
| Conread position: | 22-238 |
| Cow position: | chr19:42297829-42297625 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 119-231 |
| Cow position: | chr19:28795946-28795835 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 10, 99 |
| Conread position: | 120-232 |
| Cow position: | chr19:1586871-1586759 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 125-464 |
| Cow position: | chr19:3113765-3114109 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 247 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 110, 260 |
Show alignments to all cow chromosomes.