Cow genome map
Conread name: | rpliv0117_i12.y1 |
Conread position: | 1-233 |
Cow position: | chr2:25744178-25744398 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 178 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 52, 104 |
Conread position: | 3-232 |
Cow position: | chr2:25022818-25023035 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 181 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 53, 101 |
Conread position: | 4-230 |
Cow position: | chr2:56754758-56754545 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 165 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 53, 99 |
Conread position: | 5-216 |
Cow position: | chr2:52161142-52160946 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 161 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 61, 82 |
Conread position: | 5-232 |
Cow position: | chr2:2086436-2086221 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 176 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr2:3622253-3622464 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 162 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 5-232 |
Cow position: | chr2:4181393-4181178 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 173 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr2:4452092-4452307 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 178 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 52, 99 |
Conread position: | 5-232 |
Cow position: | chr2:6005122-6004897 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 168 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 47, 83 |
Conread position: | 5-232 |
Cow position: | chr2:6640530-6640745 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 180 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 51, 100 |
Conread position: | 5-232 |
Cow position: | chr2:8747422-8747208 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 179 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 51, 93 |
Conread position: | 5-232 |
Cow position: | chr2:9957345-9957130 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 180 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr2:9963345-9963130 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 180 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr2:29967707-29967922 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 179 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 51, 100 |
Conread position: | 5-232 |
Cow position: | chr2:34500693-34500478 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 181 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 51, 100 |
Conread position: | 5-232 |
Cow position: | chr2:42668978-42668766 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 176 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 51, 100 |
Conread position: | 5-232 |
Cow position: | chr2:43757916-43757701 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 176 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr2:46908726-46908510 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 177 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 51, 100 |
Conread position: | 5-232 |
Cow position: | chr2:47183405-47183190 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 179 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 51, 100 |
Conread position: | 5-232 |
Cow position: | chr2:48851525-48851310 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 177 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr2:49461090-49460875 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 179 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 51, 100 |
Conread position: | 5-232 |
Cow position: | chr2:53331525-53331740 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 100 |
Conread position: | 5-232 |
Cow position: | chr2:53541663-53541878 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 176 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr2:54739209-54739424 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 179 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr2:57053290-57053505 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 180 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr2:57337682-57337896 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 180 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 51, 98 |
Conread position: | 5-232 |
Cow position: | chr2:57937121-57937336 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 180 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr2:59412018-59411803 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 180 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr2:62730247-62730462 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 182 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr2:67189317-67189532 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 176 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 51, 100 |
Conread position: | 5-255 |
Cow position: | chr2:72791839-72791613 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 179 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 51, 40 |
Conread position: | 6-232 |
Cow position: | chr2:53004475-53004261 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 172 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 50, 99 |
Conread position: | 9-220 |
Cow position: | chr2:62728547-62728745 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 161 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 47, 98 |
Conread position: | 9-231 |
Cow position: | chr2:21983025-21982818 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 172 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 47, 96 |
Conread position: | 9-232 |
Cow position: | chr2:280965-280754 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 179 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 47, 90 |
Conread position: | 9-232 |
Cow position: | chr2:974643-974436 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 173 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 48, 96 |
Conread position: | 9-232 |
Cow position: | chr2:10467329-10467536 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 176 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 47, 86 |
Conread position: | 9-232 |
Cow position: | chr2:12594703-12594914 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 168 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 47, 96 |
Conread position: | 9-232 |
Cow position: | chr2:19013087-19013297 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 170 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 47, 95 |
Conread position: | 9-232 |
Cow position: | chr2:28795570-28795781 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 163 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 47, 96 |
Conread position: | 9-232 |
Cow position: | chr2:32064319-32064112 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 173 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 53, 94 |
Conread position: | 9-232 |
Cow position: | chr2:34562650-34562442 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 173 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 47, 95 |
Conread position: | 9-232 |
Cow position: | chr2:36048536-36048327 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 175 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 47, 95 |
Conread position: | 9-232 |
Cow position: | chr2:36276385-36276175 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 160 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 64, 88 |
Conread position: | 9-232 |
Cow position: | chr2:45212959-45212748 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 179 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 47, 96 |
Conread position: | 9-232 |
Cow position: | chr2:45937984-45937776 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 179 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 48, 62 |
Conread position: | 9-232 |
Cow position: | chr2:46183808-46183598 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 169 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 47, 94 |
Conread position: | 9-232 |
Cow position: | chr2:49462650-49462858 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 169 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 62, 32 |
Conread position: | 9-232 |
Cow position: | chr2:52064486-52064696 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 175 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 47, 32 |
Conread position: | 9-232 |
Cow position: | chr2:65936497-65936286 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 177 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 48, 96 |
Conread position: | 9-232 |
Cow position: | chr2:66596762-66596973 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 95 |
Conread position: | 9-232 |
Cow position: | chr2:78764377-78764593 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 176 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 36, 102 |
Conread position: | 9-232 |
Cow position: | chr2:80291037-80290826 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 179 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 41, 96 |
Conread position: | 9-261 |
Cow position: | chr2:6964383-6964632 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 95 |
Conread position: | 9-261 |
Cow position: | chr2:10731140-10730908 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 183 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 47, 23 |
Conread position: | 9-262 |
Cow position: | chr2:16902120-16902360 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 190 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 47, 97 |
Conread position: | 10-232 |
Cow position: | chr2:169446-169237 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 171 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 46, 94 |
Conread position: | 10-232 |
Cow position: | chr2:60674096-60673886 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 168 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 46, 95 |
Conread position: | 11-232 |
Cow position: | chr2:29217449-29217658 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 170 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 45, 94 |
Conread position: | 11-232 |
Cow position: | chr2:32640672-32640882 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 170 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 42, 94 |
Conread position: | 11-232 |
Cow position: | chr2:39423660-39423869 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 171 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 45, 93 |
Conread position: | 11-232 |
Cow position: | chr2:56264514-56264729 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 167 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 45, 67 |
Conread position: | 20-232 |
Cow position: | chr2:72932348-72932145 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 166 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 36, 84 |
Conread position: | 22-232 |
Cow position: | chr2:8120442-8120640 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 163 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 34, 77 |
Conread position: | 27-232 |
Cow position: | chr2:8085647-8085842 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 161 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 29, 80 |
Conread position: | 27-232 |
Cow position: | chr2:49629070-49629263 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 159 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 29, 77 |
Conread position: | 55-232 |
Cow position: | chr2:12752808-12752971 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 137 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 106-232 |
Cow position: | chr2:8106237-8106364 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 101 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 11, 26 |
Conread position: | 118-232 |
Cow position: | chr2:26923249-26923363 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 96 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 119-232 |
Cow position: | chr2:2456675-2456562 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 96 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 119-232 |
Cow position: | chr2:2602514-2602624 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 95 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 119-232 |
Cow position: | chr2:41047425-41047312 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 95 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 119-233 |
Cow position: | chr2:67956474-67956587 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 95 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 119-266 |
Cow position: | chr2:1434028-1433886 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 113 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 113, 0 |
Conread position: | 120-226 |
Cow position: | chr2:28652286-28652182 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 89 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 54, 80 |
Conread position: | 120-232 |
Cow position: | chr2:49632617-49632729 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 92 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 121-230 |
Cow position: | chr2:5996665-5996774 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 91 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 103, 61 |
Conread position: | 125-232 |
Cow position: | chr2:31408512-31408405 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 91 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 126-232 |
Cow position: | chr2:9909824-9909930 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 91 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.