Cow genome map


           Conread name:
           rpliv0117_i12.y1
        

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               11, 105
               

               Conread position:
               4-230
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               52, 95
               

               Conread position:
               5-222
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-231
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               50, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               51, 97
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               179
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               5-232
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               48, 95
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               47, 5
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               19, 91
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               47, 93
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               47, 22
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               44, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               47, 30
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               47, 98
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               46, 96
               

               Conread position:
               9-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               9-236
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               44, 96
               

               Conread position:
               9-250
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               47, 88
               

               Conread position:
               9-268
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               47, 76
               

               Conread position:
               10-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 112
               

               Conread position:
               11-232
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               45, 93
               

               Conread position:
               11-232
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               178
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               45, 83
               

               Conread position:
               14-232
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               42, 90
               

               Conread position:
               32-232
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               24, 65
               

               Conread position:
               61-232
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               119-232
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               119-232
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               52, 105
               

               Conread position:
               119-232
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               144-249
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               91, 0
               
Show alignments to all cow chromosomes.