Cow genome map
Conread name: | rpliv0117_i12.y1 |
Conread position: | 5-216 |
Cow position: | chr5:51745241-51745440 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 168 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 51, 93 |
Conread position: | 5-227 |
Cow position: | chr5:27489963-27490167 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 168 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 51, 33 |
Conread position: | 5-232 |
Cow position: | chr5:3502112-3501901 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 170 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 51, 82 |
Conread position: | 5-232 |
Cow position: | chr5:4756166-4755952 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 179 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 51, 80 |
Conread position: | 5-232 |
Cow position: | chr5:5925953-5925738 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 175 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 50, 99 |
Conread position: | 5-232 |
Cow position: | chr5:9056671-9056886 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 181 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 51, 100 |
Conread position: | 5-232 |
Cow position: | chr5:10514266-10514051 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 181 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 51, 93 |
Conread position: | 5-232 |
Cow position: | chr5:11923118-11922903 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 180 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 51, 100 |
Conread position: | 5-232 |
Cow position: | chr5:12730702-12730487 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 179 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr5:24100659-24100874 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 179 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr5:26077191-26076977 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 176 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 51, 89 |
Conread position: | 5-232 |
Cow position: | chr5:27197068-27196857 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 173 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 52, 80 |
Conread position: | 5-232 |
Cow position: | chr5:29031281-29031496 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 180 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 51, 100 |
Conread position: | 5-232 |
Cow position: | chr5:30567283-30567499 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 181 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 51, 101 |
Conread position: | 5-232 |
Cow position: | chr5:41066190-41066405 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 177 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr5:42506770-42506985 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 178 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr5:46791859-46792074 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 180 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 51, 100 |
Conread position: | 5-232 |
Cow position: | chr5:49222489-49222273 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 179 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 51, 100 |
Conread position: | 5-232 |
Cow position: | chr5:54928903-54928688 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 175 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr5:58190746-58190531 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 180 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr5:58244810-58244597 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 179 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr5:59062652-59062867 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 177 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-233 |
Cow position: | chr5:4683788-4683573 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 179 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 51, 80 |
Conread position: | 5-234 |
Cow position: | chr5:14878100-14877888 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 162 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 41, 62 |
Conread position: | 9-232 |
Cow position: | chr5:280206-280417 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 174 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 47, 96 |
Conread position: | 9-232 |
Cow position: | chr5:6152875-6152666 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 178 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 47, 96 |
Conread position: | 9-232 |
Cow position: | chr5:7275845-7276056 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 173 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 49, 96 |
Conread position: | 9-232 |
Cow position: | chr5:10854802-10854593 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 171 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 47, 96 |
Conread position: | 9-232 |
Cow position: | chr5:12641426-12641217 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 178 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 47, 29 |
Conread position: | 9-232 |
Cow position: | chr5:23830306-23830091 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 171 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 47, 95 |
Conread position: | 9-232 |
Cow position: | chr5:44710367-44710157 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 181 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 44, 62 |
Conread position: | 9-232 |
Cow position: | chr5:46736265-46736057 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 168 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 43, 90 |
Conread position: | 9-232 |
Cow position: | chr5:48226557-48226347 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 171 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 47, 90 |
Conread position: | 9-232 |
Cow position: | chr5:49520729-49520939 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 172 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 47, 96 |
Conread position: | 9-232 |
Cow position: | chr5:54859079-54858873 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 158 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 9-232 |
Cow position: | chr5:57001516-57001726 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 176 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 47, 90 |
Conread position: | 9-232 |
Cow position: | chr5:64779992-64779781 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 177 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 47, 96 |
Conread position: | 9-255 |
Cow position: | chr5:55993424-55993193 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 187 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 47, 89 |
Conread position: | 10-232 |
Cow position: | chr5:4387248-4387447 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 173 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 46, 28 |
Conread position: | 11-232 |
Cow position: | chr5:2916451-2916652 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 168 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 45, 72 |
Conread position: | 11-232 |
Cow position: | chr5:23958310-23958101 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 178 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 45, 94 |
Conread position: | 11-232 |
Cow position: | chr5:24644844-24644635 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 173 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 45, 91 |
Conread position: | 11-233 |
Cow position: | chr5:10920861-10921069 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 172 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 45, 94 |
Conread position: | 14-225 |
Cow position: | chr5:47469811-47470007 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 173 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 42, 24 |
Conread position: | 17-232 |
Cow position: | chr5:3788248-3788450 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 166 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 39, 70 |
Conread position: | 26-232 |
Cow position: | chr5:73486892-73486698 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 161 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 30, 79 |
Conread position: | 43-232 |
Cow position: | chr5:56541465-56541288 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 144 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 13, 59 |
Conread position: | 119-231 |
Cow position: | chr5:18900092-18900201 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 92 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 119-232 |
Cow position: | chr5:27550350-27550237 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 95 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 119-232 |
Cow position: | chr5:37379218-37379329 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 93 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 119-232 |
Cow position: | chr5:57889302-57889189 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 99 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 121-231 |
Cow position: | chr5:34525337-34525443 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 93 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 61, 44 |
Conread position: | 133-232 |
Cow position: | chr5:18249184-18249283 (view UCSC Genome Browser custom track) |
Alignm length: | 100 |
Alignm identity: | 83 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 134-232 |
Cow position: | chr5:34583761-34583859 (view UCSC Genome Browser custom track) |
Alignm length: | 99 |
Alignm identity: | 84 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 143-232 |
Cow position: | chr5:71622166-71622077 (view UCSC Genome Browser custom track) |
Alignm length: | 90 |
Alignm identity: | 78 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.