Cow genome map
Conread name: | rpliv0117_i12.y1 |
Conread position: | 1-232 |
Cow position: | chr9:2496649-2496435 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 166 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 55, 76 |
Conread position: | 1-232 |
Cow position: | chr9:30828828-30829046 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 178 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 55, 104 |
Conread position: | 3-229 |
Cow position: | chr9:17900488-17900279 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 174 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 50, 80 |
Conread position: | 3-232 |
Cow position: | chr9:17303890-17303676 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 184 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 53, 65 |
Conread position: | 4-216 |
Cow position: | chr9:20779979-20780175 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 164 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 52, 65 |
Conread position: | 4-232 |
Cow position: | chr9:46041179-46040968 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 169 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 48, 72 |
Conread position: | 4-233 |
Cow position: | chr9:29788615-29788401 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 173 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 52, 15 |
Conread position: | 5-217 |
Cow position: | chr9:31113202-31113399 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 158 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 48, 79 |
Conread position: | 5-232 |
Cow position: | chr9:129114-128900 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 172 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 51, 15 |
Conread position: | 5-232 |
Cow position: | chr9:1249919-1249703 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 175 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 51, 92 |
Conread position: | 5-232 |
Cow position: | chr9:2213224-2213436 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 172 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 51, 79 |
Conread position: | 5-232 |
Cow position: | chr9:2680650-2680865 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 180 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr9:3310698-3310909 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 173 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr9:4941414-4941199 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 177 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr9:6884407-6884620 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 178 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 51, 98 |
Conread position: | 5-232 |
Cow position: | chr9:7059987-7059772 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 173 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 51, 100 |
Conread position: | 5-232 |
Cow position: | chr9:24422874-24422658 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 178 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 50, 100 |
Conread position: | 5-232 |
Cow position: | chr9:28680051-28680266 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 181 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr9:37174880-37175095 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 177 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 51, 97 |
Conread position: | 5-232 |
Cow position: | chr9:38678211-38678426 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 172 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr9:44203993-44203778 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 183 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 51, 88 |
Conread position: | 5-232 |
Cow position: | chr9:47044046-47044261 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 182 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr9:48796217-48796002 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 178 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 51, 99 |
Conread position: | 5-232 |
Cow position: | chr9:56302364-56302149 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 174 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 51, 98 |
Conread position: | 5-232 |
Cow position: | chr9:59538180-59538395 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 181 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 51, 100 |
Conread position: | 5-233 |
Cow position: | chr9:60461659-60461443 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 177 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 57, 99 |
Conread position: | 7-232 |
Cow position: | chr9:2630680-2630892 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 168 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 49, 97 |
Conread position: | 9-232 |
Cow position: | chr9:1729224-1729014 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 180 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 47, 18 |
Conread position: | 9-232 |
Cow position: | chr9:1741756-1741548 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 173 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 47, 95 |
Conread position: | 9-232 |
Cow position: | chr9:5535136-5534927 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 179 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 47, 95 |
Conread position: | 9-232 |
Cow position: | chr9:5626899-5627107 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 168 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 50, 61 |
Conread position: | 9-232 |
Cow position: | chr9:9015155-9015365 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 172 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 47, 21 |
Conread position: | 9-232 |
Cow position: | chr9:16177675-16177885 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 172 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 47, 69 |
Conread position: | 9-232 |
Cow position: | chr9:17313584-17313795 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 95 |
Conread position: | 9-232 |
Cow position: | chr9:19157200-19156990 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 175 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 47, 96 |
Conread position: | 9-232 |
Cow position: | chr9:27037192-27037401 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 172 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 47, 62 |
Conread position: | 9-232 |
Cow position: | chr9:31091265-31091476 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 174 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 47, 95 |
Conread position: | 9-232 |
Cow position: | chr9:32971457-32971668 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 169 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 45, 96 |
Conread position: | 9-232 |
Cow position: | chr9:33593218-33593429 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 179 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 47, 95 |
Conread position: | 9-232 |
Cow position: | chr9:47004821-47005032 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 174 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 47, 93 |
Conread position: | 9-232 |
Cow position: | chr9:51180092-51179881 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 178 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 47, 96 |
Conread position: | 10-232 |
Cow position: | chr9:1994323-1994119 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 177 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 49, 21 |
Conread position: | 11-232 |
Cow position: | chr9:28023892-28024101 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 169 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 45, 94 |
Conread position: | 11-232 |
Cow position: | chr9:28356648-28356856 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 177 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 45, 93 |
Conread position: | 11-232 |
Cow position: | chr9:45897836-45898044 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 171 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 45, 94 |
Conread position: | 13-232 |
Cow position: | chr9:64013137-64012930 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 169 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 43, 91 |
Conread position: | 28-232 |
Cow position: | chr9:10938825-10939014 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 156 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 28, 77 |
Conread position: | 39-232 |
Cow position: | chr9:30674180-30674361 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 154 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 17, 66 |
Conread position: | 43-232 |
Cow position: | chr9:50325959-50326135 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 143 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 13, 62 |
Conread position: | 51-232 |
Cow position: | chr9:52525281-52525448 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 140 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 51-232 |
Cow position: | chr9:59480725-59480558 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 142 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 116-233 |
Cow position: | chr9:1063524-1063407 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 98 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 119-232 |
Cow position: | chr9:2288956-2288844 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 90 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 119-232 |
Cow position: | chr9:10644244-10644357 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 96 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 119-232 |
Cow position: | chr9:34240921-34240809 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 95 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 119-232 |
Cow position: | chr9:43303041-43302929 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 94 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 125-232 |
Cow position: | chr9:10856203-10856309 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 87 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 128-236 |
Cow position: | chr9:2526479-2526586 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 88 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 129-232 |
Cow position: | chr9:10324006-10324109 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 85 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 130-232 |
Cow position: | chr9:56175963-56176065 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 86 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 133-232 |
Cow position: | chr9:5453444-5453543 (view UCSC Genome Browser custom track) |
Alignm length: | 100 |
Alignm identity: | 86 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 133-265 |
Cow position: | chr9:26738208-26738333 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 103 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 154-232 |
Cow position: | chr9:14002255-14002333 (view UCSC Genome Browser custom track) |
Alignm length: | 79 |
Alignm identity: | 71 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.