Cow genome map
| Conread name: | rpliv0130_k3.y1 |
| Conread position: | 145-498 |
| Cow position: | chr14:4234534-4234198 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 245 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 23, 38 |
| Conread position: | 178-503 |
| Cow position: | chr14:2343880-2343555 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 110, 45 |
| Conread position: | 192-554 |
| Cow position: | chr14:38359386-38359776 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 40 |
| Conread position: | 259-473 |
| Cow position: | chr14:33534316-33534531 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 29, 193 |
| Conread position: | 260-421 |
| Cow position: | chr14:11075069-11074912 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 19 |
| Conread position: | 260-449 |
| Cow position: | chr14:8037183-8037381 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 260-473 |
| Cow position: | chr14:45780182-45779949 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 260-489 |
| Cow position: | chr14:15756676-15756925 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 35 |
| Conread position: | 260-490 |
| Cow position: | chr14:7149239-7149486 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 35 |
| Conread position: | 260-490 |
| Cow position: | chr14:10081834-10082084 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 48, 35 |
| Conread position: | 260-490 |
| Cow position: | chr14:12246844-12246593 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 40 |
| Conread position: | 260-524 |
| Cow position: | chr14:18579349-18579064 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 28, 118 |
| Conread position: | 260-527 |
| Cow position: | chr14:13722252-13722527 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 28, 62 |
| Conread position: | 260-545 |
| Cow position: | chr14:23148930-23148624 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 24, 36 |
| Conread position: | 263-553 |
| Cow position: | chr14:1858047-1858360 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 51, 228 |
| Conread position: | 266-562 |
| Cow position: | chr14:37249665-37249977 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 16, 30 |
| Conread position: | 327-483 |
| Cow position: | chr14:2279140-2279299 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 100 |
| Conread position: | 337-489 |
| Cow position: | chr14:34097125-34096968 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 8, 138 |
| Conread position: | 337-490 |
| Cow position: | chr14:23149869-23149711 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 338-474 |
| Cow position: | chr14:25503188-25503326 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 45, 66 |
| Conread position: | 338-490 |
| Cow position: | chr14:11076024-11076179 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 8, 111 |
| Conread position: | 344-474 |
| Cow position: | chr14:47151882-47152012 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 35, 99 |
| Conread position: | 344-508 |
| Cow position: | chr14:8458293-8458117 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 344-542 |
| Cow position: | chr14:50468658-50468859 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 123 |
| Conread position: | 347-503 |
| Cow position: | chr14:18439311-18439150 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 347-545 |
| Cow position: | chr14:33436408-33436617 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 348-483 |
| Cow position: | chr14:10488868-10489007 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 354-547 |
| Cow position: | chr14:7115888-7115688 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 31, 12 |
Show alignments to all cow chromosomes.